iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-049895

Ensembl Protein ID

ENSLACP00000011034.1

UniProt Accession

H3AN13; H3AN13_LATCH

Genbank Protein ID

ENSLACP00000011034

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01025052

Gene Name

LDB2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000009710.1	ENSLACT00000011117.1	ENSLACP00000011034.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/U-box	62.44	3.00e-68	254.00	IUUC-Dme-031667

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MVTQHGKPMF TKVCTEGRLI LEFTFDDLMR IKTWHFTIRQ YRELVPRSIL AMHAQDPQVL 60
EQLSKNITRM GLTNFTLNYL RLCVILEPMQ ELMSRHKTYN LSPRDCLKTC LFQKWQRMVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTTGGTGGG ATGCCTTTGC AACTGAGTTT TTTGAAGATG ATGCCACATT AACTCTTTCA 60
TTCTGTTTGG AAGATGGACC AAAGAGATAC AGTAAGTGAG AACTTATTTT ATATATTGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR030174--LDB2
IPR029005--LIM-bd/SEUSS

Gene Ontology

GO:0005634--C:nucleus
GO:0000989--F:transcription factor activity, transcription factor binding
GO:0006357--P:regulation of transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000177	Aegilops tauschii	34.62	3.40e-02	33.90
IUUC-Aml-002031	Ailuropoda melanoleuca	80.40	4.00e-102	364.00
IUUC-Atr-003083	Amborella trichopoda	29.41	1.00e-02	35.80
IUUC-Apl-004210	Anas platyrhynchos	78.16	2.00e-70	259.00
IUUC-Aca-005241	Anolis carolinensis	81.85	2.00e-106	378.00
IUUC-Aly-006204	Arabidopsis lyrata	35.90	1.70e-02	35.00
IUUC-Ath-007339	Arabidopsis thaliana	35.90	2.10e-02	34.70
IUUC-Ame-010910	Astyanax mexicanus	79.03	4.00e-99	354.00
IUUC-Bta-012596	Bos taurus	84.27	5.00e-113	400.00
IUUC-Bol-015721	Brassica oleracea	35.90	1.70e-02	34.70
IUUC-Bra-017183	Brassica rapa	35.90	1.60e-02	34.70
IUUC-Cel-018189	Caenorhabditis elegans	34.78	7.00e-11	62.00
IUUC-Cja-019586	Callithrix jacchus	86.75	1.00e-118	419.00
IUUC-Cfa-021188	Canis familiaris	80.40	4.00e-102	364.00
IUUC-Cpo-022350	Cavia porcellus	81.85	6.00e-105	374.00
IUUC-Csa-023816	Chlorocebus sabaeus	82.26	7.00e-107	380.00
IUUC-Cho-024958	Choloepus hoffmanni	84.78	1.00e-42	166.00
IUUC-Cin-025721	Ciona intestinalis	51.87	4.00e-52	198.00
IUUC-Csv-026065	Ciona savignyi	50.93	1.00e-53	203.00
IUUC-Dre-027356	Danio rerio	76.98	9.00e-108	383.00
IUUC-Dno-029918	Dasypus novemcinctus	81.00	7.00e-98	350.00
IUUC-Dor-030634	Dipodomys ordii	81.85	1.00e-106	379.00
IUUC-Dme-031667	Drosophila melanogaster	60.52	5.00e-71	261.00
IUUC-Ete-032246	Echinops telfairi	83.47	2.00e-112	398.00
IUUC-Eca-034015	Equus caballus	86.75	7.00e-119	420.00
IUUC-Eeu-034902	Erinaceus europaeus	81.85	1.00e-106	379.00
IUUC-Fca-035903	Felis catus	81.20	8.00e-105	373.00
IUUC-Fal-037407	Ficedula albicollis	83.47	4.00e-113	400.00
IUUC-Gmo-039466	Gadus morhua	77.14	1.00e-105	376.00
IUUC-Gga-040214	Gallus gallus	81.05	1.00e-103	369.00
IUUC-Gac-042214	Gasterosteus aculeatus	76.10	5.00e-107	380.00
IUUC-Gma-042794	Glycine max	27.14	6.00e-03	36.60
IUUC-Ggo-044988	Gorilla gorilla	86.75	5.00e-119	420.00
IUUC-Hsa-046092	Homo sapiens	85.94	1.00e-115	409.00
IUUC-Itr-047934	Ictidomys tridecemlineatus	81.85	2.00e-106	379.00
IUUC-Lpe-050806	Leersia perrieri	34.62	1.60e-02	35.00
IUUC-Loc-052845	Lepisosteus oculatus	79.44	3.00e-107	381.00
IUUC-Laf-054538	Loxodonta africana	81.20	2.00e-105	375.00
IUUC-Mcc-055116	Macaca mulatta	79.67	3.00e-74	271.00
IUUC-Meu-056777	Macropus eugenii	73.79	8.00e-91	327.00
IUUC-Mtr-058142	Medicago truncatula	35.90	1.70e-02	35.00
IUUC-Mga-059716	Meleagris gallopavo	83.06	8.00e-113	399.00
IUUC-Mmr-060649	Microcebus murinus	85.54	2.00e-117	415.00
IUUC-Mdo-062535	Monodelphis domestica	87.95	5.00e-117	414.00
IUUC-Mmu-064036	Mus musculus	84.34	1.00e-115	409.00
IUUC-Mac-065338	Musa acuminata	34.48	7.00e-03	36.20
IUUC-Mpu-065719	Mustela putorius furo	81.85	2.00e-106	379.00
IUUC-Mlu-067219	Myotis lucifugus	81.20	7.00e-105	374.00
IUUC-Nle-068983	Nomascus leucogenys	86.75	8.00e-119	419.00
IUUC-Opr-070467	Ochotona princeps	81.85	1.00e-106	379.00
IUUC-Ont-071566	Oreochromis niloticus	78.63	9.00e-109	386.00
IUUC-Oan-073368	Ornithorhynchus anatinus	82.26	2.00e-105	375.00
IUUC-Ocu-074854	Oryctolagus cuniculus	86.75	1.00e-119	422.00
IUUC-Oni-082193	Oryza nivara	30.30	3.80e+00	24.30
IUUC-Ola-086364	Oryzias latipes	78.63	7.00e-109	387.00
IUUC-Oga-088235	Otolemur garnettii	85.14	6.00e-115	407.00
IUUC-Oar-089547	Ovis aries	80.40	6.00e-102	364.00
IUUC-Ptr-091423	Pan troglodytes	86.75	2.00e-118	418.00
IUUC-Pan-092378	Papio anubis	82.26	4.00e-107	381.00
IUUC-Psi-093638	Pelodiscus sinensis	87.95	2.00e-114	405.00
IUUC-Pma-094384	Petromyzon marinus	65.73	5.00e-53	199.00
IUUC-Pfo-096031	Poecilia formosa	77.82	1.00e-108	386.00
IUUC-Pab-097886	Pongo abelii	86.75	8.00e-119	419.00
IUUC-Pop-099430	Populus trichocarpa	35.90	2.00e-02	34.70
IUUC-Pca-101138	Procavia capensis	81.85	1.00e-106	379.00
IUUC-Ppe-101293	Prunus persica	27.27	2.30e-02	33.90
IUUC-Pva-103215	Pteropus vampyrus	86.35	2.00e-119	422.00
IUUC-Rno-105968	Rattus norvegicus	84.34	2.00e-115	408.00
IUUC-Sha-107595	Sarcophilus harrisii	81.05	5.00e-104	370.00
IUUC-Smo-109552	Selaginella moellendorffii	20.14	2.10e-02	34.70
IUUC-Sly-110873	Solanum lycopersicum	41.03	4.00e-03	37.00
IUUC-Stu-112586	Solanum tuberosum	19.44	1.30e+00	28.50
IUUC-Sar-113076	Sorex araneus	83.06	4.00e-56	211.00
IUUC-Ssc-115755	Sus scrofa	81.05	7.00e-104	370.00
IUUC-Tgu-117326	Taeniopygia guttata	87.50	2.00e-112	398.00
IUUC-Tru-117858	Takifugu rubripes	82.94	6.00e-116	410.00
IUUC-Tsy-119296	Tarsius syrichta	85.54	1.00e-115	409.00
IUUC-Tni-119822	Tetraodon nigroviridis	76.71	1.00e-106	379.00
IUUC-Tca-120935	Theobroma cacao	35.90	2.30e-02	34.70
IUUC-Tbe-127366	Tupaia belangeri	81.85	1.00e-106	379.00
IUUC-Ttr-128484	Tursiops truncatus	85.14	5.00e-118	417.00
IUUC-Vpa-130304	Vicugna pacos	83.24	2.00e-74	272.00
IUUC-Vvi-131560	Vitis vinifera	27.14	8.00e-03	36.20
IUUC-Xtr-132062	Xenopus tropicalis	80.65	9.00e-103	366.00
IUUC-Xma-134288	Xiphophorus maculatus	79.44	6.00e-110	390.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence