iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ame-011058

Ensembl Protein ID

ENSAMXP00000022021.1

UniProt Accession

W5LPZ0; W5LPZ0_ASTMX

Genbank Protein ID

ENSAMXP00000022021

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

APWO01086491

Gene Name

CDRT1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMXG00000021385.1	ENSAMXT00000022021.1	ENSAMXP00000022021.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-31	106.2	510	544
UBD/Beta-Prp	9.70e-46	156.5	428	704

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsdtllvsGsdDgtikvWDlrtgvl 35
           gH + +tcl+++++llvsG++D+ +kvW+l +g +
   Q: 510  GHMGTITCLDLHEDLLVSGARDCRVKVWSLQSGQC 544
           8**********669****************99987 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsv 97
           +++ +++++  +++++a+gs+d+ +++ dvt+ k +  l +gh + v+av + +++ +++++s D  i+ w+l+tg+c++ l+gh  ++
   Q: 428  EDPSRVIHY-SGGQMVAVGSKDRAVRLLDVTQIKEVPLLmQGHAGSVRAVLICEERGLIISASYDLSIRCWNLKTGECTMLLSGHMGTI 515
           567777788.8999*********************99999************************************************* PP
   S: 98   lslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvysl 186
           ++l++++  d lvsG +d  ++vw l++gqc+e+++ gh++ v cv+++   +l+ s++  + v++W  +t++ll+  tg h+++v++l
   Q: 516  TCLDLHE--DLLVSGARDCRVKVWSLQSGQCYEKLKMGHRKPVLCVKISA--SLVLSSCEEGLVKVWETETADLLKIITG-HQGYVKCL 599
           *******..*****************************************..***************************9.******** PP
   S: 187  sfdsngkelvsgsldgtvklwdlq...tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn..ssvisv 270
            fd+   +++sg+ dg+v  w+ +   t+  ++t++  ++    + f+    r+++g  Dg iri++  sgd+l+ ++ +   s v s+
   Q: 600  FFDQ--WHILSGGADGQVLAWSTKthfTN-SLMTFHHPKEVL-TLSFL--FLRVITGCLDGKIRIFNFLSGDCLRIIKISThqSPVLSI 682
           ****..8*****************65433.488888666544.45555..47***********************98775511444444 PP
   S: 271  avlsfgdnvlvlgsedskvniwklkk 296
              +  dn +v  s+ s+v ++++++
   Q: 683  ---HTHDNRIVVNSS-SRVLLLQFTE 704
           ...446676666665.5666666665 PP

Organism

Astyanax mexicanus

Protein Sequence
(Fasta)

MQTDTIERRQ RAEDTQTDST ERRPQFSCRT ERRQSACGRC QSCAYSTHLQ HSTQWLNRAG 60
DEAKRRFLTG LLLRCRSLKI LENLQNVLQI TSGKDFTYSR AQIKAQLPVE GRNWECGDSG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCAGTGCTG CGTCTCTGCG GTCGCTTAGA TACTGCAGTC CCGCAGAGCC GCGCTGGAGT 60
TCAGCGCTGA ACCCGAGAAC TCCTCACTGA TACCCGGGTC CAGAGAGCGC AGACAGCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001837	Ailuropoda melanoleuca	47.13	6.00e-95	342.00
IUUC-Apl-003572	Anas platyrhynchos	47.10	2.00e-116	413.00
IUUC-Aca-004297	Anolis carolinensis	36.82	4.00e-124	439.00
IUUC-Bta-012667	Bos taurus	46.59	6.00e-97	348.00
IUUC-Cja-019163	Callithrix jacchus	36.65	7.00e-136	478.00
IUUC-Cfa-020784	Canis familiaris	38.43	5.00e-140	492.00
IUUC-Cpo-021429	Cavia porcellus	46.31	7.00e-93	335.00
IUUC-Csa-023597	Chlorocebus sabaeus	38.82	6.00e-135	474.00
IUUC-Cho-024559	Choloepus hoffmanni	30.81	4.00e-53	202.00
IUUC-Dre-027496	Danio rerio	59.22	1.00e-155	543.00
IUUC-Dno-028995	Dasypus novemcinctus	38.10	5.00e-138	485.00
IUUC-Ete-032823	Echinops telfairi	46.28	2.00e-47	184.00
IUUC-Eca-033666	Equus caballus	48.36	3.00e-123	436.00
IUUC-Fca-035589	Felis catus	39.20	1.00e-145	510.00
IUUC-Fal-037403	Ficedula albicollis	45.56	3.00e-107	382.00
IUUC-Gmo-038669	Gadus morhua	42.52	9.00e-111	394.00
IUUC-Gga-041227	Gallus gallus	46.73	3.00e-116	413.00
IUUC-Hsa-046221	Homo sapiens	38.98	3.00e-144	506.00
IUUC-Itr-049011	Ictidomys tridecemlineatus	37.59	4.00e-131	462.00
IUUC-Lch-050046	Latimeria chalumnae	37.52	1.00e-135	477.00
IUUC-Loc-052366	Lepisosteus oculatus	50.21	0.00e+00	652.00
IUUC-Laf-053745	Loxodonta africana	37.03	2.00e-136	480.00
IUUC-Mcc-054826	Macaca mulatta	38.32	9.00e-140	491.00
IUUC-Meu-056636	Macropus eugenii	52.75	2.00e-25	111.00
IUUC-Mga-060185	Meleagris gallopavo	45.94	2.00e-112	400.00
IUUC-Mdo-062382	Monodelphis domestica	36.80	1.00e-123	437.00
IUUC-Mmu-063623	Mus musculus	38.34	1.00e-132	468.00
IUUC-Mpu-066872	Mustela putorius furo	47.75	3.00e-121	429.00
IUUC-Mlu-067552	Myotis lucifugus	46.48	3.00e-93	336.00
IUUC-Nle-069247	Nomascus leucogenys	38.80	1.00e-141	497.00
IUUC-Opr-070455	Ochotona princeps	47.14	9.00e-95	341.00
IUUC-Ont-071926	Oreochromis niloticus	50.23	2.00e-119	423.00
IUUC-Oan-073411	Ornithorhynchus anatinus	34.81	3.00e-114	406.00
IUUC-Ocu-073893	Oryctolagus cuniculus	43.94	8.00e-124	438.00
IUUC-Oga-087937	Otolemur garnettii	45.89	1.00e-93	338.00
IUUC-Oar-089680	Ovis aries	36.49	5.00e-131	462.00
IUUC-Ptr-091549	Pan troglodytes	35.85	7.00e-122	431.00
IUUC-Pan-091904	Papio anubis	38.44	7.00e-141	494.00
IUUC-Psi-093181	Pelodiscus sinensis	37.50	3.00e-131	463.00
IUUC-Pma-094711	Petromyzon marinus	51.15	3.00e-84	305.00
IUUC-Pab-098067	Pongo abelii	39.42	1.00e-144	507.00
IUUC-Pca-100867	Procavia capensis	51.87	1.00e-70	261.00
IUUC-Pva-102209	Pteropus vampyrus	36.60	2.00e-127	449.00
IUUC-Rno-105374	Rattus norvegicus	38.73	2.00e-128	454.00
IUUC-Sha-107459	Sarcophilus harrisii	48.03	2.00e-36	147.00
IUUC-Tgu-117261	Taeniopygia guttata	42.59	1.00e-92	333.00
IUUC-Tru-117705	Takifugu rubripes	50.94	9.00e-46	175.00
IUUC-Tni-120365	Tetraodon nigroviridis	47.11	3.00e-48	184.00
IUUC-Tbe-128015	Tupaia belangeri	35.42	1.00e-115	410.00
IUUC-Ttr-128654	Tursiops truncatus	36.38	2.00e-125	442.00
IUUC-Vpa-130176	Vicugna pacos	34.71	1.00e-105	377.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence