iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Itr-048181

Ensembl Protein ID

ENSSTOP00000002049.2

UniProt Accession

I3M053; I3M053_ICTTR

Genbank Protein ID

ENSSTOP00000002049

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01093398

Gene Name

RNF138

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000002293.2	ENSSTOT00000002292.2	ENSSTOP00000002049.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.20e-07	30.4	18	58

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C++C+e +k+++++  C+Hvf+++C+  ++          ++CPlCr
   Q: 18   CPVCQEVLKTPVRTAACQHVFCRKCFlTAM------RESGIHCPLCR 58
           **********999999*********96666......999*******8 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MAEELSAATA YTEDDFYCPV CQEVLKTPVR TAACQHVFCR KCFLTAMRES GIHCPLCRGN 60
VTRRERACPE RALDLENIMR KFSGSCRCCA KQIKFYRMRH HYKSCKKYQD EYGVSSIIPN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCTCGTCAT GGCCGAGGAG CTGTCCGCGG CCACGGCCTA CACAGAAGAT GATTTCTACT 60
GCCCGGTCTG TCAGGAGGTG CTGAAAACGC CCGTGCGGAC CGCGGCCTGT CAGCACGTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR008598--Di19_Zn_binding_dom
IPR034734--ZF_C2HC_RNF
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51803--ZF_C2HC_RNF
PS50089--ZF_RING_2

Pfam

PF05605--zf-Di19

SMART

SM00184--RING

Gene Ontology

GO:0005634--C:nucleus
GO:0035861--C:site of double-strand break
GO:0003697--F:single-stranded DNA binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0010792--P:DNA double-strand break processing involved in repair via single-strand annealing
GO:0000724--P:double-strand break repair via homologous recombination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001267	Ailuropoda melanoleuca	97.55	1.00e-142	498.00
IUUC-Apl-003941	Anas platyrhynchos	67.48	4.00e-90	323.00
IUUC-Aca-005233	Anolis carolinensis	68.57	4.00e-101	360.00
IUUC-Bta-012999	Bos taurus	97.55	5.00e-143	499.00
IUUC-Cja-019489	Callithrix jacchus	97.55	5.00e-143	499.00
IUUC-Cfa-020567	Canis familiaris	99.49	2.00e-117	414.00
IUUC-Cpo-022165	Cavia porcellus	97.14	4.00e-142	496.00
IUUC-Csa-024096	Chlorocebus sabaeus	97.96	2.00e-143	500.00
IUUC-Cho-024686	Choloepus hoffmanni	89.37	7.00e-107	379.00
IUUC-Dno-029625	Dasypus novemcinctus	97.55	3.00e-142	496.00
IUUC-Dor-030983	Dipodomys ordii	83.61	1.00e-116	411.00
IUUC-Ete-032453	Echinops telfairi	93.08	2.00e-69	254.00
IUUC-Eca-034367	Equus caballus	98.08	7.00e-121	425.00
IUUC-Eeu-034722	Erinaceus europaeus	78.26	4.00e-90	323.00
IUUC-Fca-036590	Felis catus	98.78	2.00e-144	503.00
IUUC-Fal-037287	Ficedula albicollis	72.29	2.00e-106	377.00
IUUC-Ggr-039833	Gaeumannomyces graminis	44.90	2.00e-07	50.10
IUUC-Gga-041055	Gallus gallus	69.62	3.00e-102	363.00
IUUC-Ggo-045324	Gorilla gorilla	97.55	8.00e-143	498.00
IUUC-Hsa-046364	Homo sapiens	97.55	8.00e-143	498.00
IUUC-Loc-052428	Lepisosteus oculatus	38.77	4.00e-45	174.00
IUUC-Laf-054506	Loxodonta africana	97.96	1.00e-143	501.00
IUUC-Mcc-054595	Macaca mulatta	98.56	4.00e-121	426.00
IUUC-Mpo-057316	Magnaporthe poae	44.64	3.00e-08	53.10
IUUC-Mga-060068	Meleagris gallopavo	70.54	1.00e-101	361.00
IUUC-Mmr-061516	Microcebus murinus	96.76	1.00e-142	498.00
IUUC-Mdo-062243	Monodelphis domestica	86.59	4.00e-128	449.00
IUUC-Mmu-063719	Mus musculus	93.88	6.00e-139	485.00
IUUC-Mpu-065869	Mustela putorius furo	98.78	2.00e-144	503.00
IUUC-Mlu-068157	Myotis lucifugus	97.12	1.00e-119	421.00
IUUC-Nle-069538	Nomascus leucogenys	82.45	7.00e-112	395.00
IUUC-Opr-070640	Ochotona princeps	94.69	2.00e-139	487.00
IUUC-Oan-072919	Ornithorhynchus anatinus	87.94	1.00e-95	341.00
IUUC-Ocu-074897	Oryctolagus cuniculus	97.55	8.00e-143	498.00
IUUC-Oga-088165	Otolemur garnettii	96.73	1.00e-142	498.00
IUUC-Oar-090364	Ovis aries	97.49	9.00e-115	405.00
IUUC-Ptr-090784	Pan troglodytes	97.55	8.00e-143	498.00
IUUC-Pan-091874	Papio anubis	97.96	2.00e-143	500.00
IUUC-Psi-093531	Pelodiscus sinensis	77.11	3.00e-105	374.00
IUUC-Pab-098013	Pongo abelii	97.55	8.00e-143	498.00
IUUC-Pca-100822	Procavia capensis	90.58	6.00e-118	416.00
IUUC-Pva-102936	Pteropus vampyrus	96.33	4.00e-142	496.00
IUUC-Rno-106110	Rattus norvegicus	58.12	3.00e-72	263.00
IUUC-Sha-107403	Sarcophilus harrisii	93.97	1.00e-111	394.00
IUUC-Sar-113678	Sorex araneus	97.59	6.00e-46	176.00
IUUC-Ssc-116192	Sus scrofa	98.78	2.00e-144	503.00
IUUC-Tgu-116820	Taeniopygia guttata	70.94	6.00e-99	352.00
IUUC-Tsy-119211	Tarsius syrichta	80.29	3.00e-92	330.00
IUUC-Tbe-127480	Tupaia belangeri	60.41	3.00e-74	270.00
IUUC-Ttr-128859	Tursiops truncatus	97.55	1.00e-143	501.00
IUUC-Vda-129783	Verticillium dahliae	37.68	2.00e-09	57.00
IUUC-Vpa-130682	Vicugna pacos	93.06	8.00e-131	458.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence