iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099388

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000338

Gene Name

POPTRDRAFT_552270; POPTR_0002s17150g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s17150	POPTR_0002s17150.1	POPTR_0002s17150.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.90e-08	34.8	323	365

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl+++  k+ +++ p C+H+fhadC+  w       + + +CP+Cr
   Q: 323  CAICLSEYnsKETVRIIPeCKHCFHADCVDEW------LRMNSTCPVCR 365
           ******9998666***99**************......999*******8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSFNAMCILE VLFLIKLLHF INAAADCSIS TCSIGDVPVR FPFRIEGQQP RNCGYPGFDL 60
SCNNQSSTVL KLPHSGDFLV RDINYLTQQI QLYDSDNCLA KRLLQLNLSG SPFLGFFHQN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTTGACA TTATAAATGT TTGTTCTAGT GTGGTTTTAA ATGAAGAAAT CCTAGTGTTA 60
TAAGAAGGCC TATTTGTTCC TGAACCAGTC TTTCAACGCT ATGTGCATCT TAGAAGTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR032872--WAK_assoc_C
IPR025287--WAK_GUB
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13947--GUB_WAK_bind
PF14380--WAK_assoc
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0030247--F:polysaccharide binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0002s17150g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005946	Arabidopsis lyrata	45.01	8.00e-79	286.00
IUUC-Bol-016430	Brassica oleracea	47.92	2.00e-85	309.00
IUUC-Bra-017148	Brassica rapa	48.00	6.00e-92	330.00
IUUC-Gma-043197	Glycine max	51.46	1.00e-103	369.00
IUUC-Ggo-045499	Gorilla gorilla	48.15	1.00e-12	66.60
IUUC-Hsa-046834	Homo sapiens	48.15	1.00e-12	66.60
IUUC-Mtr-057646	Medicago truncatula	49.60	7.00e-99	353.00
IUUC-Mmr-061408	Microcebus murinus	50.98	3.00e-12	65.90
IUUC-Nle-069074	Nomascus leucogenys	48.15	1.00e-12	66.60
IUUC-Ocu-074883	Oryctolagus cuniculus	50.00	2.00e-13	68.20
IUUC-Ptr-091529	Pan troglodytes	48.15	1.00e-12	66.60
IUUC-Pab-097593	Pongo abelii	50.98	2.00e-12	66.60
IUUC-Ppe-102079	Prunus persica	55.83	9.00e-120	422.00
IUUC-Rno-105272	Rattus norvegicus	50.98	2.00e-12	66.20
IUUC-Sly-111740	Solanum lycopersicum	49.03	3.00e-83	301.00
IUUC-Stu-112029	Solanum tuberosum	48.88	2.00e-83	302.00
IUUC-Tca-121363	Theobroma cacao	59.51	2.00e-132	464.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence