iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID	iRefIndex	PINA	Mentha
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/CARD	29.08	1.00e-69	263.00	IUUC-Hsa-046671

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MRKKQCSSIL SLYDKEIILC LEPIYRDPEK GDGFSELLPL GRIDELKIQS ENAQEFSKQL 60
YHDLKNSILS NADDERLYKD IMTYLQTYLP KCTVHKLLNC SNREVKLSDF HYILDHFEGF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATAAAATGAG GAAAAAGCAG TGTTCTTCAA TATTATCCCT CTACGACAAA GAGATCATAC 60
TCTGCCTCGA GCCGATCTAC CGTGATCCGG AAAAAGTGAG CTGGAAATGC ATTTTCTGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0347--Helicase
KW-0378--Hydrolase
KW-0547--Nucleotide-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR006935--Helicase/UvrB_N
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR021673--RLR_CTR

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS51789--RLR_CTR

Pfam

PF00271--Helicase_C
PF04851--ResIII
PF11648--RIG-I_C-RD

SMART

SM00487--DEXDc
SM00490--HELICc

Gene Ontology

GO:0005524--F:ATP binding
GO:0003677--F:DNA binding
GO:0004386--F:helicase activity
GO:0016246--P:RNA interference

KEGG

cel:CELE_F15B10.2

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001898	Ailuropoda melanoleuca	29.99	2.00e-68	252.00
IUUC-Apl-003966	Anas platyrhynchos	28.48	8.00e-68	250.00
IUUC-Aca-005329	Anolis carolinensis	25.93	9.00e-58	217.00
IUUC-Ame-011305	Astyanax mexicanus	27.55	2.00e-30	126.00
IUUC-Bta-012489	Bos taurus	29.22	4.00e-62	232.00
IUUC-Cja-018716	Callithrix jacchus	29.16	2.00e-71	263.00
IUUC-Cfa-020269	Canis familiaris	30.45	3.00e-74	272.00
IUUC-Cpo-022507	Cavia porcellus	29.54	1.00e-63	236.00
IUUC-Cre-022916	Chlamydomonas reinhardtii	36.21	1.00e-10	61.20
IUUC-Csa-024209	Chlorocebus sabaeus	29.09	6.00e-72	264.00
IUUC-Cho-025104	Choloepus hoffmanni	31.80	5.00e-54	204.00
IUUC-Cin-025792	Ciona intestinalis	31.17	5.00e-33	134.00
IUUC-Cgl-026385	Colletotrichum gloeosporioides	25.09	2.00e-26	114.00
IUUC-Dre-028305	Danio rerio	26.43	3.00e-28	119.00
IUUC-Dno-028954	Dasypus novemcinctus	29.29	1.00e-61	230.00
IUUC-Dor-030410	Dipodomys ordii	31.62	7.00e-27	114.00
IUUC-Ete-032950	Echinops telfairi	25.81	2.00e-29	123.00
IUUC-Eca-034039	Equus caballus	28.63	6.00e-62	231.00
IUUC-Eeu-035009	Erinaceus europaeus	29.72	2.00e-49	189.00
IUUC-Fca-036169	Felis catus	30.65	6.00e-73	267.00
IUUC-Fal-037579	Ficedula albicollis	27.35	2.00e-57	216.00
IUUC-Fso-038398	Fusarium solani	32.03	6.00e-11	62.40
IUUC-Gmo-038598	Gadus morhua	32.24	7.00e-25	108.00
IUUC-Ggr-039898	Gaeumannomyces graminis	25.00	1.10e-01	31.60
IUUC-Gga-040467	Gallus gallus	25.93	5.00e-57	215.00
IUUC-Gac-042316	Gasterosteus aculeatus	25.31	1.00e-49	190.00
IUUC-Ggo-045318	Gorilla gorilla	28.86	2.00e-64	239.00
IUUC-Hsa-046671	Homo sapiens	28.73	4.00e-64	238.00
IUUC-Itr-047996	Ictidomys tridecemlineatus	29.61	7.00e-59	221.00
IUUC-Lch-050461	Latimeria chalumnae	27.94	1.00e-62	233.00
IUUC-Loc-052582	Lepisosteus oculatus	29.79	7.00e-63	234.00
IUUC-Laf-054324	Loxodonta africana	29.00	6.00e-59	221.00
IUUC-Mcc-055390	Macaca mulatta	29.89	4.00e-73	268.00
IUUC-Meu-056365	Macropus eugenii	33.96	8.00e-34	137.00
IUUC-Mga-059205	Meleagris gallopavo	26.46	2.00e-56	213.00
IUUC-Mvi-060497	Microbotryum violaceum	26.32	1.00e-09	58.20
IUUC-Mmr-061407	Microcebus murinus	30.30	9.00e-71	260.00
IUUC-Mdo-063079	Monodelphis domestica	27.36	1.00e-60	227.00
IUUC-Mmu-063939	Mus musculus	29.12	1.00e-66	247.00
IUUC-Mpu-066226	Mustela putorius furo	30.71	3.00e-69	255.00
IUUC-Mlu-068092	Myotis lucifugus	29.32	3.00e-60	225.00
IUUC-Nfi-068405	Neosartorya fischeri	26.52	1.00e-09	58.20
IUUC-Nle-069479	Nomascus leucogenys	31.15	4.00e-33	135.00
IUUC-Opr-070246	Ochotona princeps	27.78	4.00e-30	125.00
IUUC-Ont-071702	Oreochromis niloticus	26.78	2.00e-60	226.00
IUUC-Oan-072742	Ornithorhynchus anatinus	29.07	6.00e-64	237.00
IUUC-Ocu-073959	Oryctolagus cuniculus	28.96	5.00e-67	248.00
IUUC-Ola-086351	Oryzias latipes	27.00	1.00e-58	220.00
IUUC-Oga-089173	Otolemur garnettii	30.91	3.00e-64	239.00
IUUC-Oar-089369	Ovis aries	28.90	3.00e-62	232.00
IUUC-Ptr-091032	Pan troglodytes	28.73	4.00e-64	238.00
IUUC-Pan-092383	Papio anubis	29.58	3.00e-72	265.00
IUUC-Psi-093432	Pelodiscus sinensis	28.85	3.00e-62	232.00
IUUC-Pma-094367	Petromyzon marinus	29.18	6.00e-22	97.80
IUUC-Pfo-096401	Poecilia formosa	27.57	1.00e-28	120.00
IUUC-Pab-098416	Pongo abelii	28.67	7.00e-64	237.00
IUUC-Pca-100993	Procavia capensis	28.29	2.00e-45	176.00
IUUC-Pva-102966	Pteropus vampyrus	28.91	1.00e-65	243.00
IUUC-Pgr-103529	Puccinia graminis	29.44	2.00e-11	63.90
IUUC-Rno-105198	Rattus norvegicus	26.88	8.00e-59	221.00
IUUC-Sha-107622	Sarcophilus harrisii	25.86	1.00e-53	203.00
IUUC-Ssl-108450	Sclerotinia sclerotiorum	27.08	1.70e-02	35.00
IUUC-Sar-113625	Sorex araneus	31.32	9.00e-29	121.00
IUUC-Ssc-116120	Sus scrofa	29.78	7.00e-58	218.00
IUUC-Tgu-117314	Taeniopygia guttata	28.49	4.00e-60	225.00
IUUC-Tru-118445	Takifugu rubripes	25.65	4.00e-29	122.00
IUUC-Tsy-119512	Tarsius syrichta	28.75	8.00e-31	127.00
IUUC-Tni-120711	Tetraodon nigroviridis	25.70	4.00e-58	218.00
IUUC-Tre-122194	Trichoderma reesei	33.04	1.00e-11	65.10
IUUC-Tbe-127644	Tupaia belangeri	33.71	6.00e-29	121.00
IUUC-Ttr-128421	Tursiops truncatus	28.28	5.00e-58	218.00
IUUC-Uma-129440	Ustilago maydis	34.09	5.20e-01	29.60
IUUC-Vpa-130602	Vicugna pacos	36.88	6.00e-38	151.00
IUUC-Xtr-131927	Xenopus tropicalis	28.41	6.00e-64	238.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence