iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-049473

Ensembl Protein ID

ENSLACP00000016177.2

UniProt Accession

H3B2Q6; H3B2Q6_LATCH

Genbank Protein ID

ENSLACP00000016177

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01095751

Gene Name

PREB

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000014249.2	ENSLACT00000016289.2	ENSLACP00000016177.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-07	31.8	167	190

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 9    laf.sd.tllvsGsdDgtikvWDl 30
           ++f  d t+lv+G+ Dg i+vW++
   Q: 167  VRFnKDkTILVTGGVDGFIRVWEF 190
           78887789**************96 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MGSRRGRVPD LYRAPFPLYT VQIERESGTV ITAGGGGAAK TGVRNGVHFL RLERIGGQLA 60
ATLVHSQDTE TRPTMSMALA GDIIAAGQDA SCHILRYHEA PKKQEKKAGK KEEKKEANDK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGGCGGTGA GCATGCGCAT TACGGCGCAG CGGGTGCAGA TGGAGGGCTG TGACACGTCT 60
GGCTGCGGGG AACAACGTTA CAACCACAAC TGTTACAACA AGAACAACCG ACACAGTCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane

KEGG

lcm:102366534

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000155	Aegilops tauschii	25.49	8.00e-11	61.20
IUUC-Aml-001671	Ailuropoda melanoleuca	59.15	8.00e-127	446.00
IUUC-Atr-002477	Amborella trichopoda	22.76	5.00e-12	65.10
IUUC-Aly-005479	Arabidopsis lyrata	26.09	4.00e-14	72.40
IUUC-Ath-006922	Arabidopsis thaliana	28.14	3.00e-14	72.40
IUUC-Ame-010812	Astyanax mexicanus	52.11	5.00e-68	250.00
IUUC-Bta-012386	Bos taurus	61.08	2.00e-138	485.00
IUUC-Bdi-014110	Brachypodium distachyon	28.06	2.00e-20	93.60
IUUC-Bra-017708	Brassica rapa	28.45	2.00e-17	82.80
IUUC-Cel-018480	Caenorhabditis elegans	24.18	4.00e-21	95.50
IUUC-Cja-018998	Callithrix jacchus	61.00	2.00e-144	504.00
IUUC-Cfa-020666	Canis familiaris	60.14	2.00e-133	468.00
IUUC-Cpo-022030	Cavia porcellus	54.34	2.00e-128	452.00
IUUC-Csa-023521	Chlorocebus sabaeus	61.41	4.00e-133	467.00
IUUC-Cin-025431	Ciona intestinalis	34.34	1.00e-49	190.00
IUUC-Dre-027832	Danio rerio	58.64	1.00e-141	495.00
IUUC-Dno-028989	Dasypus novemcinctus	61.32	8.00e-147	513.00
IUUC-Dme-031901	Drosophila melanogaster	32.13	3.00e-47	182.00
IUUC-Ete-032290	Echinops telfairi	61.08	2.00e-133	468.00
IUUC-Eca-033917	Equus caballus	60.61	1.00e-137	483.00
IUUC-Fca-036323	Felis catus	60.14	3.00e-137	481.00
IUUC-Gmo-038693	Gadus morhua	58.37	5.00e-137	480.00
IUUC-Gga-040702	Gallus gallus	66.51	2.00e-148	518.00
IUUC-Gac-042635	Gasterosteus aculeatus	57.80	2.00e-131	462.00
IUUC-Gma-043946	Glycine max	27.04	1.00e-17	84.00
IUUC-Ggo-044648	Gorilla gorilla	60.99	8.00e-130	456.00
IUUC-Hsa-046003	Homo sapiens	60.85	1.00e-133	469.00
IUUC-Itr-048613	Ictidomys tridecemlineatus	60.85	6.00e-137	480.00
IUUC-Lpe-051586	Leersia perrieri	26.61	2.00e-20	93.20
IUUC-Loc-052177	Lepisosteus oculatus	66.51	3.00e-163	567.00
IUUC-Laf-054366	Loxodonta africana	61.56	2.00e-140	492.00
IUUC-Mcc-055775	Macaca mulatta	61.50	2.00e-133	468.00
IUUC-Meu-056562	Macropus eugenii	60.38	8.00e-127	446.00
IUUC-Mtr-058661	Medicago truncatula	28.57	1.00e-19	90.50
IUUC-Mvi-060443	Microbotryum violaceum	23.31	2.00e-12	67.40
IUUC-Mmr-061126	Microcebus murinus	61.56	2.00e-134	471.00
IUUC-Mdo-062928	Monodelphis domestica	61.03	3.00e-129	454.00
IUUC-Mmu-064083	Mus musculus	60.14	1.00e-127	449.00
IUUC-Mac-064955	Musa acuminata	24.37	6.00e-18	85.10
IUUC-Mpu-066857	Mustela putorius furo	59.43	2.00e-146	511.00
IUUC-Mlu-067891	Myotis lucifugus	60.61	3.00e-134	471.00
IUUC-Nle-070030	Nomascus leucogenys	60.61	6.00e-130	457.00
IUUC-Opr-070864	Ochotona princeps	66.04	3.00e-98	351.00
IUUC-Ont-072204	Oreochromis niloticus	57.77	2.00e-133	468.00
IUUC-Oan-073643	Ornithorhynchus anatinus	57.62	2.00e-100	358.00
IUUC-Ocu-074217	Oryctolagus cuniculus	61.32	1.00e-129	456.00
IUUC-Oba-075587	Oryza barthii	26.16	1.00e-18	87.00
IUUC-Obr-076826	Oryza brachyantha	27.41	5.00e-23	101.00
IUUC-Ogl-077927	Oryza glaberrima	26.61	2.00e-19	90.10
IUUC-Ogu-078241	Oryza glumaepatula	26.61	3.00e-19	89.40
IUUC-Oin-080217	Oryza indica	26.61	3.00e-19	89.40
IUUC-Olo-081060	Oryza longistaminata	26.40	1.00e-18	87.00
IUUC-Ome-082007	Oryza meridionalis	26.21	3.00e-19	89.00
IUUC-Oni-082827	Oryza nivara	26.61	3.00e-19	89.40
IUUC-Opu-083159	Oryza punctata	26.21	3.00e-19	89.40
IUUC-Oru-085039	Oryza rufipogon	26.61	3.00e-19	89.40
IUUC-Osa-086258	Oryza sativa	26.61	3.00e-19	89.40
IUUC-Ola-087223	Oryzias latipes	55.88	7.00e-121	427.00
IUUC-Oga-088417	Otolemur garnettii	60.38	3.00e-129	454.00
IUUC-Oar-090435	Ovis aries	60.85	6.00e-138	483.00
IUUC-Ptr-090869	Pan troglodytes	61.08	6.00e-128	450.00
IUUC-Pan-092527	Papio anubis	61.41	4.00e-133	467.00
IUUC-Pma-094156	Petromyzon marinus	57.66	3.00e-130	457.00
IUUC-Ppa-095904	Physcomitrella patens	27.85	4.00e-11	62.40
IUUC-Pfo-097488	Poecilia formosa	53.74	4.00e-129	454.00
IUUC-Pab-097720	Pongo abelii	61.08	4.00e-133	467.00
IUUC-Pop-099618	Populus trichocarpa	23.83	5.00e-16	78.60
IUUC-Pca-100288	Procavia capensis	60.12	3.00e-116	411.00
IUUC-Ppe-101864	Prunus persica	27.83	1.00e-12	67.40
IUUC-Pva-103192	Pteropus vampyrus	60.61	1.00e-135	476.00
IUUC-Rno-106123	Rattus norvegicus	59.91	6.00e-128	450.00
IUUC-Sha-107169	Sarcophilus harrisii	61.03	3.00e-127	448.00
IUUC-Smo-109265	Selaginella moellendorffii	27.90	2.00e-13	69.70
IUUC-Sly-111551	Solanum lycopersicum	27.40	1.00e-14	73.90
IUUC-Stu-112264	Solanum tuberosum	27.40	7.00e-13	68.20
IUUC-Sar-113218	Sorex araneus	58.82	4.00e-77	280.00
IUUC-Ssc-115282	Sus scrofa	61.76	6.00e-136	477.00
IUUC-Tru-117866	Takifugu rubripes	58.24	2.00e-132	465.00
IUUC-Tca-121083	Theobroma cacao	26.85	5.00e-18	85.50
IUUC-Tae-124218	Triticum aestivum	26.09	9.00e-19	87.40
IUUC-Tur-126597	Triticum urartu	24.51	7.00e-10	57.40
IUUC-Ttr-128585	Tursiops truncatus	61.08	1.00e-130	459.00
IUUC-Vvi-131024	Vitis vinifera	26.67	2.00e-17	83.60
IUUC-Xma-134081	Xiphophorus maculatus	53.74	3.00e-125	441.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence