iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107951

Ensembl Protein ID

EEB08463

UniProt Accession

B6K4Q6; B6K4Q6_SCHJY

Genbank Protein ID

EEB08463.2

Protein Name

Transcription factor TFIIH complex subunit Pmh1

Genbank Nucleotide ID

KE651167

Gene Name

SJAG_03618

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_03618	EEB08463	EEB08463

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	33.55	3.00e-34	143.00	IUUC-Hsa-045876
E3 activity/RING/RING	38.08	1.00e-49	191.00	IUUC-Sce-106405

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MEIEAPRKPD EKCPLCQADR YLNPNMKLLI NPECYHKMCE SCVDRIFTTG PAPCPTPGCG 60
RILRKAKFRE QTFEDAQIER EIDIRRRMAK IFNKTQQDFA SLQAYNDYLE QVENLTFNLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAAATATGA AAGTTTAGCT GAAGAAGGTT CCAGCCATCC ATTAGCCATA TAAACTTCAT 60
AATTATCGAA TGCAGTAAAG AAGGTAGAGG AATGAATGCC TACGGCGAAT TCGTGCTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR015877--Cdk-activating_kinase_MAT1_cen
IPR004575--MAT1/Tfb3
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF06391--MAT1
PF17121--zf-C3HC4_5

Gene Ontology

GO:0005829--C:cytosol
GO:0070985--C:TFIIK complex
GO:0061575--F:cyclin-dependent protein serine/threonine kinase activator activity
GO:0008270--F:zinc ion binding
GO:0007049--P:cell cycle
GO:0006289--P:nucleotide-excision repair
GO:0070816--P:phosphorylation of RNA polymerase II C-terminal domain
GO:1901409--P:positive regulation of phosphorylation of RNA polymerase II C-terminal domain
GO:0006366--P:transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000821	Aegilops tauschii	43.42	2.00e-10	57.00
IUUC-Aml-002414	Ailuropoda melanoleuca	33.87	7.00e-40	155.00
IUUC-Atr-002627	Amborella trichopoda	53.12	3.00e-17	79.30
IUUC-Apl-003312	Anas platyrhynchos	31.65	5.00e-27	112.00
IUUC-Aca-004731	Anolis carolinensis	33.55	6.00e-38	149.00
IUUC-Aly-006244	Arabidopsis lyrata	44.78	2.00e-14	69.70
IUUC-Ath-007136	Arabidopsis thaliana	46.27	1.00e-14	70.90
IUUC-Ago-007788	Ashbya gossypii	37.62	5.00e-56	209.00
IUUC-Acl-008179	Aspergillus clavatus	36.78	2.00e-52	197.00
IUUC-Afl-008465	Aspergillus flavus	35.56	7.00e-50	189.00
IUUC-Afu-009056	Aspergillus fumigatus	36.36	8.00e-51	192.00
IUUC-Ani-009235	Aspergillus nidulans	25.82	5.00e-09	52.80
IUUC-Ang-009677	Aspergillus niger	56.93	1.00e-48	184.00
IUUC-Aor-010017	Aspergillus oryzae	35.76	1.00e-50	191.00
IUUC-Ate-010259	Aspergillus terreus	57.66	2.00e-49	187.00
IUUC-Ame-010934	Astyanax mexicanus	29.34	2.00e-28	117.00
IUUC-Bgr-012074	Blumeria graminis	34.26	2.00e-48	184.00
IUUC-Bta-013329	Bos taurus	33.23	1.00e-38	151.00
IUUC-Bci-013704	Botrytis cinerea	34.71	7.00e-46	175.00
IUUC-Bdi-014672	Brachypodium distachyon	56.25	1.00e-17	80.90
IUUC-Bol-015807	Brassica oleracea	29.55	1.00e-04	38.10
IUUC-Bra-016949	Brassica rapa	47.76	7.00e-15	71.20
IUUC-Cel-018428	Caenorhabditis elegans	38.97	1.00e-28	117.00
IUUC-Cja-019720	Callithrix jacchus	33.55	2.00e-39	153.00
IUUC-Cfa-020319	Canis familiaris	33.23	2.00e-38	150.00
IUUC-Cpo-021652	Cavia porcellus	34.53	4.00e-40	156.00
IUUC-Cre-022749	Chlamydomonas reinhardtii	44.29	9.00e-15	70.90
IUUC-Csa-023560	Chlorocebus sabaeus	33.87	4.00e-40	155.00
IUUC-Cho-025042	Choloepus hoffmanni	54.17	4.00e-03	33.50
IUUC-Cin-025502	Ciona intestinalis	34.27	1.00e-39	154.00
IUUC-Csv-026302	Ciona savignyi	31.35	6.00e-35	139.00
IUUC-Cgl-026541	Colletotrichum gloeosporioides	29.50	1.00e-10	57.80
IUUC-Cne-027055	Cryptococcus neoformans	55.97	8.00e-45	172.00
IUUC-Cme-027128	Cyanidioschyzon merolae	52.73	1.00e-11	61.20
IUUC-Dre-027714	Danio rerio	32.58	7.00e-35	139.00
IUUC-Dno-029232	Dasypus novemcinctus	38.10	8.00e-36	140.00
IUUC-Dor-030996	Dipodomys ordii	48.05	8.00e-17	78.60
IUUC-Dse-031359	Dothistroma septosporum	37.91	2.00e-49	187.00
IUUC-Dme-031992	Drosophila melanogaster	33.44	1.00e-36	144.00
IUUC-Ete-032973	Echinops telfairi	41.82	1.00e-10	58.20
IUUC-Eca-034116	Equus caballus	33.55	3.00e-39	153.00
IUUC-Eeu-035143	Erinaceus europaeus	29.84	6.00e-22	95.90
IUUC-Fca-035960	Felis catus	33.55	5.00e-39	152.00
IUUC-Fal-037039	Ficedula albicollis	35.80	9.00e-26	108.00
IUUC-Fox-037882	Fusarium oxysporum	46.98	4.00e-39	153.00
IUUC-Fso-038318	Fusarium solani	31.15	7.00e-40	155.00
IUUC-Gmo-038905	Gadus morhua	31.29	2.00e-33	134.00
IUUC-Ggr-039857	Gaeumannomyces graminis	48.15	1.00e-27	115.00
IUUC-Gga-041216	Gallus gallus	41.61	5.00e-32	129.00
IUUC-Gac-041987	Gasterosteus aculeatus	31.51	4.00e-33	132.00
IUUC-Gma-044312	Glycine max	56.72	3.00e-18	82.40
IUUC-Ggo-044930	Gorilla gorilla	29.35	9.00e-27	111.00
IUUC-Hsa-045876	Homo sapiens	33.87	4.00e-40	155.00
IUUC-Hvu-047088	Hordeum vulgare	54.69	2.00e-17	80.50
IUUC-Itr-048476	Ictidomys tridecemlineatus	38.32	2.00e-30	122.00
IUUC-Kpa-049202	Komagataella pastoris	34.09	7.00e-43	165.00
IUUC-Lch-049886	Latimeria chalumnae	32.25	9.00e-35	138.00
IUUC-Lpe-050952	Leersia perrieri	56.25	2.00e-17	80.10
IUUC-Loc-052556	Lepisosteus oculatus	44.53	9.00e-34	135.00
IUUC-Lma-053002	Leptosphaeria maculans	60.74	6.00e-51	192.00
IUUC-Laf-054516	Loxodonta africana	33.55	2.00e-39	153.00
IUUC-Mcc-054761	Macaca mulatta	38.22	1.00e-36	144.00
IUUC-Mor-057048	Magnaporthe oryzae	47.06	3.00e-34	136.00
IUUC-Mpo-057598	Magnaporthe poae	53.21	1.00e-24	103.00
IUUC-Mtr-058131	Medicago truncatula	55.22	2.00e-17	79.70
IUUC-Mla-059009	Melampsora laricipopulina	56.30	3.00e-46	175.00
IUUC-Mga-060199	Meleagris gallopavo	42.59	2.00e-24	103.00
IUUC-Mvi-060382	Microbotryum violaceum	36.54	3.00e-45	173.00
IUUC-Mmr-061671	Microcebus murinus	32.34	3.00e-37	146.00
IUUC-Mdo-062228	Monodelphis domestica	33.55	7.00e-40	155.00
IUUC-Mmu-064416	Mus musculus	34.19	2.00e-41	160.00
IUUC-Mac-064807	Musa acuminata	53.12	8.00e-16	74.70
IUUC-Mpu-066455	Mustela putorius furo	33.23	4.00e-38	149.00
IUUC-Mlu-067325	Myotis lucifugus	37.72	3.00e-30	122.00
IUUC-Nfi-068566	Neosartorya fischeri	36.81	1.00e-51	194.00
IUUC-Ncr-068687	Neurospora crassa	50.43	1.00e-36	144.00
IUUC-Nle-069937	Nomascus leucogenys	33.87	4.00e-40	155.00
IUUC-Opr-070321	Ochotona princeps	39.62	7.00e-22	95.50
IUUC-Ont-072636	Oreochromis niloticus	42.34	3.00e-32	130.00
IUUC-Oan-072915	Ornithorhynchus anatinus	33.95	2.00e-24	103.00
IUUC-Ocu-074547	Oryctolagus cuniculus	33.87	2.00e-35	140.00
IUUC-Oba-075318	Oryza barthii	59.38	3.00e-18	82.40
IUUC-Obr-076081	Oryza brachyantha	59.38	7.00e-19	84.70
IUUC-Ogl-077072	Oryza glaberrima	59.38	3.00e-18	82.40
IUUC-Ogu-078667	Oryza glumaepatula	57.81	6.00e-18	81.60
IUUC-Oin-079796	Oryza indica	59.38	1.00e-18	83.60
IUUC-Olo-080344	Oryza longistaminata	42.17	1.00e-13	67.80
IUUC-Ome-081805	Oryza meridionalis	59.38	2.00e-18	84.00
IUUC-Oni-082783	Oryza nivara	59.38	3.00e-18	82.80
IUUC-Opu-083247	Oryza punctata	56.25	1.00e-17	80.50
IUUC-Oru-084336	Oryza rufipogon	59.38	3.00e-18	82.40
IUUC-Osa-086047	Oryza sativa	59.38	1.00e-18	83.60
IUUC-Ola-086780	Oryzias latipes	31.83	4.00e-37	146.00
IUUC-Olu-087653	Ostreococcus lucimarinus	40.30	6.00e-12	61.60
IUUC-Oga-088012	Otolemur garnettii	33.00	1.00e-38	151.00
IUUC-Oar-090274	Ovis aries	29.35	1.00e-28	117.00
IUUC-Ptr-090780	Pan troglodytes	33.87	4.00e-40	155.00
IUUC-Pan-091815	Papio anubis	32.29	9.00e-22	94.70
IUUC-Psi-093883	Pelodiscus sinensis	33.23	6.00e-36	142.00
IUUC-Pma-094717	Petromyzon marinus	43.08	6.00e-14	68.90
IUUC-Pno-094958	Phaeosphaeria nodorum	37.97	2.00e-52	197.00
IUUC-Ppa-095445	Physcomitrella patens	47.62	2.00e-14	70.10
IUUC-Pfo-096051	Poecilia formosa	43.80	8.00e-34	135.00
IUUC-Pab-097609	Pongo abelii	37.70	5.00e-36	142.00
IUUC-Pop-099460	Populus trichocarpa	47.76	1.00e-15	74.30
IUUC-Pca-101094	Procavia capensis	32.74	4.00e-30	122.00
IUUC-Ppe-101481	Prunus persica	53.73	3.00e-17	79.30
IUUC-Pva-103219	Pteropus vampyrus	44.53	1.00e-35	141.00
IUUC-Pgr-103557	Puccinia graminis	57.78	1.00e-47	181.00
IUUC-Ptt-103719	Puccinia triticina	56.16	1.00e-48	184.00
IUUC-Pte-104301	Pyrenophora teres	48.39	1.00e-37	147.00
IUUC-Pyt-104486	Pyrenophora triticirepentis	49.19	3.00e-38	150.00
IUUC-Rno-105846	Rattus norvegicus	33.87	8.00e-41	158.00
IUUC-Sce-106405	Saccharomyces cerevisiae	38.08	3.00e-54	202.00
IUUC-Sha-107594	Sarcophilus harrisii	36.65	5.00e-27	111.00
IUUC-Spo-108137	Schizosaccharomyces pombe	61.66	3.00e-91	326.00
IUUC-Ssl-108503	Sclerotinia sclerotiorum	34.47	1.00e-49	188.00
IUUC-Smo-108895	Selaginella moellendorffii	51.52	6.00e-17	78.20
IUUC-Sit-110672	Setaria italica	56.25	3.00e-18	82.40
IUUC-Sly-111744	Solanum lycopersicum	48.44	3.00e-15	72.40
IUUC-Stu-112343	Solanum tuberosum	50.00	2.00e-15	73.20
IUUC-Sar-113298	Sorex araneus	37.70	4.00e-35	139.00
IUUC-Sbi-113918	Sorghum bicolor	57.81	5.00e-18	82.00
IUUC-Sre-114991	Sporisorium reilianum	53.10	4.00e-40	156.00
IUUC-Ssc-116152	Sus scrofa	45.37	2.00e-27	113.00
IUUC-Tgu-116452	Taeniopygia guttata	32.26	7.00e-34	135.00
IUUC-Tru-118621	Takifugu rubripes	30.67	3.00e-35	140.00
IUUC-Tsy-119500	Tarsius syrichta	37.77	3.00e-35	140.00
IUUC-Tni-120454	Tetraodon nigroviridis	40.00	3.00e-21	93.20
IUUC-Tca-121192	Theobroma cacao	50.75	1.00e-15	74.30
IUUC-Tre-122011	Trichoderma reesei	32.59	2.00e-36	144.00
IUUC-Tvi-122317	Trichoderma virens	33.12	3.00e-42	163.00
IUUC-Tae-123854	Triticum aestivum	57.81	2.00e-18	83.20
IUUC-Tur-126556	Triticum urartu	56.25	6.00e-18	81.60
IUUC-Tme-127135	Tuber melanosporum	43.18	3.00e-51	193.00
IUUC-Tbe-127287	Tupaia belangeri	32.73	4.00e-27	112.00
IUUC-Ttr-128864	Tursiops truncatus	32.58	1.00e-39	154.00
IUUC-Uma-129539	Ustilago maydis	56.35	2.00e-43	167.00
IUUC-Vda-129713	Verticillium dahliae	49.29	2.00e-31	127.00
IUUC-Vpa-130462	Vicugna pacos	30.97	4.00e-30	123.00
IUUC-Vvi-130988	Vitis vinifera	52.24	2.00e-16	76.60
IUUC-Xtr-131830	Xenopus tropicalis	37.17	1.00e-35	140.00
IUUC-Xma-133952	Xiphophorus maculatus	44.53	5.00e-34	135.00
IUUC-Yli-134433	Yarrowia lipolytica	34.53	2.00e-48	184.00
IUUC-Zma-134867	Zea mays	56.25	5.00e-18	82.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence