iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.2__1046__AT1G68070.1	fgenesh2_kg.2__1046__AT1G68070.1	fgenesh2_kg.2__1046__AT1G68070.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.60e-09	37.1	293	334

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl++++dg  +++l+C+H+fh +C+ kw       + +++CPlC+
   Q: 293  CCICLSSYEDGaeLVSLSCNHHFHSTCIVKW------LKMNATCPLCK 334
           ********88766999***************......**********7 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSSPESPSGS DSSTPLLRSR QSSPRRPPVI AVLLGRASGR RGASMVVRET AAQELEERRA 60
DWGYSKPVVA LDMLWNTAFV VVAIVMLLVF KEEKPNVPIR VWICGYAIQC LVHVVLVWLE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTGACTTT TGAGTGGTAC TGATAGGTAC AAAGAAACAC AAACCCTAGA TTTATCTTCA 60
TCTCTCTCAA TTCTGTGTCA AGCGAAGACG GATTCAACGA TGTCTTCACC TGAATCACCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005774--C:vacuolar membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_475916

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007135	Arabidopsis thaliana	93.35	5.00e-162	562.00
IUUC-Bdi-014419	Brachypodium distachyon	56.31	1.00e-67	249.00
IUUC-Bol-015503	Brassica oleracea	82.02	9.00e-125	439.00
IUUC-Bra-017341	Brassica rapa	82.09	5.00e-127	446.00
IUUC-Gma-042852	Glycine max	66.19	1.00e-101	362.00
IUUC-Lpe-050934	Leersia perrieri	54.66	3.00e-88	318.00
IUUC-Mtr-058387	Medicago truncatula	66.96	6.00e-97	346.00
IUUC-Mac-064512	Musa acuminata	56.74	1.00e-93	335.00
IUUC-Ocu-074655	Oryctolagus cuniculus	48.89	2.00e-09	57.00
IUUC-Oba-075784	Oryza barthii	57.53	3.00e-72	264.00
IUUC-Obr-076831	Oryza brachyantha	56.76	4.00e-72	263.00
IUUC-Ogu-077960	Oryza glumaepatula	52.12	4.00e-82	297.00
IUUC-Oin-079107	Oryza indica	51.72	3.00e-78	284.00
IUUC-Olo-080835	Oryza longistaminata	49.81	3.00e-63	234.00
IUUC-Ome-081564	Oryza meridionalis	57.68	9.00e-90	322.00
IUUC-Oni-082731	Oryza nivara	52.42	1.00e-82	299.00
IUUC-Opu-083749	Oryza punctata	57.33	2.00e-84	305.00
IUUC-Oru-084835	Oryza rufipogon	52.42	1.00e-82	299.00
IUUC-Pop-098913	Populus trichocarpa	67.72	4.00e-109	387.00
IUUC-Ppe-101978	Prunus persica	62.82	1.00e-109	389.00
IUUC-Rno-104862	Rattus norvegicus	51.02	9.00e-12	65.10
IUUC-Sit-110199	Setaria italica	57.52	1.00e-83	302.00
IUUC-Sly-110887	Solanum lycopersicum	61.43	6.00e-110	389.00
IUUC-Stu-112563	Solanum tuberosum	62.25	3.00e-114	404.00
IUUC-Sbi-114428	Sorghum bicolor	57.84	5.00e-83	300.00
IUUC-Tca-121328	Theobroma cacao	69.49	7.00e-103	366.00
IUUC-Tae-125157	Triticum aestivum	56.17	1.00e-70	259.00
IUUC-Tbe-128106	Tupaia belangeri	48.08	1.00e-11	64.30
IUUC-Ttr-128832	Tursiops truncatus	51.02	9.00e-12	65.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence