iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cpo-021995

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02003255

Gene Name

Pdlim2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000020871.1	ENSCPOT00000024755.1	ENSCPOP00000018094.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/Other	68.64	1.00e-109	393.00	IUUC-Mmu-063244

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Cavia porcellus

Protein Sequence
(Fasta)

MVLTVDVVGP APWGFRITGG RDFHTPIMVT KVNERGKAEA ADLRPGDIIV AINGESAEGM 60
LHAEAQSKIR QSASPLRLQL DRSRAASPGQ GNSDGSLEVL ATRFQGSLRT RPDSQSSLWS 120

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Nucleotide Sequence
(Fasta)

ATGGTGCTGA CTGTGGATGT GGTGGGGCCA GCGCCCTGGG GCTTCCGCAT CACTGGGGGC 60
AGGGATTTCC ACACACCCAT CATGGTAACC AAGGTAAGGG CTGCTTCCAG GACCACAGGA 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR031847--DUF4749
IPR001478--PDZ
IPR001781--Znf_LIM

PROSITE

PS00478--LIM_DOMAIN_1
PS50023--LIM_DOMAIN_2
PS50106--PDZ

Pfam

PF15936--DUF4749
PF00412--LIM
PF00595--PDZ

SMART

SM00132--LIM
SM00228--PDZ

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001484	Ailuropoda melanoleuca	70.59	7.00e-118	416.00
IUUC-Aca-004512	Anolis carolinensis	65.93	9.00e-51	194.00
IUUC-Ame-011626	Astyanax mexicanus	40.64	1.00e-69	256.00
IUUC-Bta-012510	Bos taurus	71.03	3.00e-111	394.00
IUUC-Bdi-014056	Brachypodium distachyon	30.16	5.90e-02	32.30
IUUC-Cja-019248	Callithrix jacchus	74.44	2.00e-115	408.00
IUUC-Cfa-020352	Canis familiaris	72.27	1.00e-115	409.00
IUUC-Csa-024190	Chlorocebus sabaeus	75.49	2.00e-115	408.00
IUUC-Dre-027418	Danio rerio	37.70	3.00e-52	198.00
IUUC-Dor-030439	Dipodomys ordii	56.91	1.00e-52	200.00
IUUC-Dme-031753	Drosophila melanogaster	41.18	2.00e-10	60.10
IUUC-Eca-034183	Equus caballus	73.11	7.00e-117	413.00
IUUC-Eeu-034958	Erinaceus europaeus	67.00	4.00e-82	297.00
IUUC-Fca-035680	Felis catus	73.26	7.00e-116	410.00
IUUC-Gmo-038558	Gadus morhua	53.28	4.00e-39	155.00
IUUC-Gac-041738	Gasterosteus aculeatus	54.48	2.00e-40	159.00
IUUC-Ggo-044609	Gorilla gorilla	74.65	3.00e-114	404.00
IUUC-Hsa-045868	Homo sapiens	75.21	3.00e-112	399.00
IUUC-Itr-048876	Ictidomys tridecemlineatus	75.07	1.00e-118	419.00
IUUC-Loc-052212	Lepisosteus oculatus	45.23	4.00e-75	274.00
IUUC-Laf-053824	Loxodonta africana	71.94	2.00e-113	402.00
IUUC-Mcc-054962	Macaca mulatta	75.49	2.00e-115	408.00
IUUC-Meu-056007	Macropus eugenii	77.27	7.00e-39	155.00
IUUC-Mmr-060607	Microcebus murinus	74.58	1.00e-114	406.00
IUUC-Mdo-062935	Monodelphis domestica	73.48	4.00e-52	197.00
IUUC-Mmu-063244	Mus musculus	70.54	1.00e-115	409.00
IUUC-Mpu-065888	Mustela putorius furo	73.11	2.00e-106	378.00
IUUC-Mlu-067124	Myotis lucifugus	72.73	2.00e-124	439.00
IUUC-Nle-069063	Nomascus leucogenys	72.37	1.00e-81	295.00
IUUC-Opr-071221	Ochotona princeps	89.84	2.00e-50	193.00
IUUC-Ont-072000	Oreochromis niloticus	41.21	1.00e-69	256.00
IUUC-Oan-073012	Ornithorhynchus anatinus	76.69	3.00e-54	205.00
IUUC-Ocu-074376	Oryctolagus cuniculus	70.82	6.00e-109	387.00
IUUC-Ola-086915	Oryzias latipes	42.82	1.00e-67	250.00
IUUC-Oga-088393	Otolemur garnettii	73.63	1.00e-118	419.00
IUUC-Oar-089421	Ovis aries	71.59	3.00e-116	411.00
IUUC-Ptr-091089	Pan troglodytes	74.56	4.00e-102	364.00
IUUC-Pan-092163	Papio anubis	73.80	8.00e-109	386.00
IUUC-Psi-093043	Pelodiscus sinensis	45.10	5.00e-69	254.00
IUUC-Pfo-096885	Poecilia formosa	55.91	3.00e-39	155.00
IUUC-Pab-097988	Pongo abelii	73.96	4.00e-102	364.00
IUUC-Pca-100131	Procavia capensis	72.50	1.00e-107	383.00
IUUC-Pva-102706	Pteropus vampyrus	69.10	1.00e-103	370.00
IUUC-Rno-104992	Rattus norvegicus	69.97	4.00e-117	414.00
IUUC-Sha-107463	Sarcophilus harrisii	57.80	3.00e-62	231.00
IUUC-Ssc-115811	Sus scrofa	73.33	1.00e-113	402.00
IUUC-Tbe-127240	Tupaia belangeri	57.27	1.00e-68	253.00
IUUC-Ttr-128236	Tursiops truncatus	54.65	5.00e-80	291.00
IUUC-Vpa-130569	Vicugna pacos	59.34	1.00e-52	199.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence