iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bta-012894

Ensembl Protein ID

ENSBTAP00000012261.4

UniProt Accession

G3X6R8; G3X6R8_BOVIN

Genbank Protein ID

ENSBTAP00000012261

Protein Name

Tudor domain-containing protein 3

Genbank Nucleotide ID

DAAA02032549

Gene Name

TDRD3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000009308.4	ENSBTAT00000012261.4	ENSBTAP00000012261.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.00e-08	35.1	266	303

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           de +l+ ++eMGF++e+ +qaL +++nnleaA++ Ll+
   Q: 266  DEKALRHITEMGFSKEASRQALMDNGNNLEAALNVLLN 303
           7999********************************97 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

MAEAPGAALS RAGWYLSDEG IEACTSSPDK VNVNDIILIA LNLEGPCVLQ IQKIRNVAAP 60
KDNEESQAAP RMLRLQMTDG HISCTAVEFS YLSKISLNTP PGTKVKLSGA VDIKNGFLLL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGCCCCCCA GCATCCCGGC ATAAGCAGCT ACCATGGCCG AGGCTCCCGG AGCGGCGCTG 60
TCCCGGGCGG GTTGGTAAGT GGCAGGTCTC CCGGCCGCGG GTGCGGGCCG GGCCCGAGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR033472--DUF1767
IPR013894--RMI1_N
IPR002999--Tudor
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50304--TUDOR
PS50030--UBA

Pfam

PF08585--RMI1_N
PF00567--TUDOR
PF00627--UBA

SMART

SM01161--DUF1767
SM00333--TUDOR
SM00165--UBA

Gene Ontology

GO:0035145--C:exon-exon junction complex
GO:0003682--F:chromatin binding
GO:0003723--F:RNA binding
GO:0003713--F:transcription coactivator activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000323	Aegilops tauschii	33.33	3.00e-16	79.00
IUUC-Aml-001751	Ailuropoda melanoleuca	90.44	0.00e+00	1262.00
IUUC-Atr-002788	Amborella trichopoda	32.03	6.00e-16	78.60
IUUC-Apl-004055	Anas platyrhynchos	75.51	0.00e+00	936.00
IUUC-Aca-004367	Anolis carolinensis	68.99	0.00e+00	960.00
IUUC-Aly-006072	Arabidopsis lyrata	36.57	2.00e-19	90.10
IUUC-Ath-007491	Arabidopsis thaliana	35.82	6.00e-19	88.60
IUUC-Ame-011439	Astyanax mexicanus	62.33	4.00e-92	332.00
IUUC-Bdi-014462	Brachypodium distachyon	32.28	1.00e-16	80.50
IUUC-Bol-015343	Brassica oleracea	38.76	2.00e-19	89.70
IUUC-Bra-016787	Brassica rapa	36.69	1.00e-19	90.90
IUUC-Cel-018154	Caenorhabditis elegans	31.28	3.00e-25	110.00
IUUC-Cja-019364	Callithrix jacchus	91.24	0.00e+00	1153.00
IUUC-Cfa-021166	Canis familiaris	88.95	0.00e+00	1221.00
IUUC-Cpo-021678	Cavia porcellus	81.40	0.00e+00	948.00
IUUC-Csa-023299	Chlorocebus sabaeus	88.17	0.00e+00	1306.00
IUUC-Cho-024694	Choloepus hoffmanni	94.43	2.00e-137	482.00
IUUC-Cin-025191	Ciona intestinalis	38.26	6.00e-39	153.00
IUUC-Csv-026348	Ciona savignyi	51.92	9.00e-13	65.10
IUUC-Dre-028715	Danio rerio	48.54	9.00e-156	543.00
IUUC-Dno-030091	Dasypus novemcinctus	86.03	0.00e+00	1234.00
IUUC-Dor-030807	Dipodomys ordii	78.65	0.00e+00	965.00
IUUC-Dme-031770	Drosophila melanogaster	31.12	4.00e-38	153.00
IUUC-Ete-032507	Echinops telfairi	67.08	0.00e+00	676.00
IUUC-Eca-033406	Equus caballus	92.12	0.00e+00	1037.00
IUUC-Eeu-034600	Erinaceus europaeus	81.41	0.00e+00	966.00
IUUC-Fca-035916	Felis catus	90.27	0.00e+00	1261.00
IUUC-Fal-036658	Ficedula albicollis	71.85	0.00e+00	938.00
IUUC-Gmo-038974	Gadus morhua	52.32	1.00e-89	323.00
IUUC-Gga-040195	Gallus gallus	72.39	0.00e+00	1008.00
IUUC-Gac-042537	Gasterosteus aculeatus	44.43	4.00e-145	508.00
IUUC-Gma-044234	Glycine max	40.77	4.00e-22	99.00
IUUC-Ggo-044715	Gorilla gorilla	90.20	0.00e+00	1181.00
IUUC-Hsa-045814	Homo sapiens	88.84	0.00e+00	1318.00
IUUC-Hvu-047365	Hordeum vulgare	30.99	7.00e-16	78.60
IUUC-Itr-047866	Ictidomys tridecemlineatus	87.12	0.00e+00	1237.00
IUUC-Lch-050393	Latimeria chalumnae	61.07	0.00e+00	776.00
IUUC-Lpe-050691	Leersia perrieri	33.59	2.00e-17	83.60
IUUC-Loc-052859	Lepisosteus oculatus	56.95	0.00e+00	669.00
IUUC-Laf-053953	Loxodonta africana	87.75	0.00e+00	843.00
IUUC-Mcc-055846	Macaca mulatta	88.08	0.00e+00	1282.00
IUUC-Meu-056790	Macropus eugenii	69.33	0.00e+00	857.00
IUUC-Mtr-058749	Medicago truncatula	40.62	1.00e-17	84.00
IUUC-Mla-058959	Melampsora laricipopulina	41.18	2.00e-06	47.00
IUUC-Mga-059656	Meleagris gallopavo	71.64	0.00e+00	933.00
IUUC-Mmr-061089	Microcebus murinus	86.57	0.00e+00	1196.00
IUUC-Mdo-063043	Monodelphis domestica	68.64	0.00e+00	738.00
IUUC-Mmu-063654	Mus musculus	80.51	0.00e+00	1111.00
IUUC-Mac-064947	Musa acuminata	37.40	5.00e-14	72.40
IUUC-Mpu-066115	Mustela putorius furo	92.66	0.00e+00	1055.00
IUUC-Mlu-066974	Myotis lucifugus	89.91	0.00e+00	1182.00
IUUC-Nle-069184	Nomascus leucogenys	87.77	0.00e+00	1298.00
IUUC-Opr-070770	Ochotona princeps	80.03	0.00e+00	1012.00
IUUC-Ont-072040	Oreochromis niloticus	49.14	3.00e-130	459.00
IUUC-Oan-073448	Ornithorhynchus anatinus	85.19	3.00e-67	247.00
IUUC-Ocu-074405	Oryctolagus cuniculus	88.44	0.00e+00	1272.00
IUUC-Oba-075977	Oryza barthii	32.28	8.00e-11	61.20
IUUC-Obr-076298	Oryza brachyantha	33.86	6.00e-17	82.00
IUUC-Ogl-077706	Oryza glaberrima	33.07	6.00e-11	62.00
IUUC-Ogu-078381	Oryza glumaepatula	32.82	1.00e-11	64.30
IUUC-Oin-080150	Oryza indica	33.59	2.00e-11	63.20
IUUC-Ome-081153	Oryza meridionalis	32.82	1.00e-10	61.20
IUUC-Oni-083115	Oryza nivara	33.59	5.00e-11	62.00
IUUC-Opu-083860	Oryza punctata	32.82	1.00e-15	77.80
IUUC-Oru-084859	Oryza rufipogon	33.59	3.00e-11	62.80
IUUC-Osa-085567	Oryza sativa	33.59	7.00e-10	58.50
IUUC-Ola-087049	Oryzias latipes	46.25	3.00e-161	561.00
IUUC-Oga-088455	Otolemur garnettii	87.23	0.00e+00	1264.00
IUUC-Oar-090096	Ovis aries	94.38	0.00e+00	1342.00
IUUC-Ptr-090974	Pan troglodytes	90.63	0.00e+00	1197.00
IUUC-Pan-092657	Papio anubis	87.63	0.00e+00	1302.00
IUUC-Psi-093113	Pelodiscus sinensis	74.73	0.00e+00	926.00
IUUC-Ppa-095466	Physcomitrella patens	38.52	5.00e-20	92.40
IUUC-Pfo-096631	Poecilia formosa	46.68	1.00e-157	550.00
IUUC-Pab-098070	Pongo abelii	88.17	0.00e+00	1306.00
IUUC-Pop-099235	Populus trichocarpa	34.92	5.00e-18	85.90
IUUC-Pca-101032	Procavia capensis	81.87	0.00e+00	1044.00
IUUC-Ppe-101793	Prunus persica	37.50	5.00e-20	92.00
IUUC-Pva-102290	Pteropus vampyrus	90.94	0.00e+00	1165.00
IUUC-Rno-105080	Rattus norvegicus	81.87	0.00e+00	961.00
IUUC-Sha-107598	Sarcophilus harrisii	75.61	0.00e+00	1053.00
IUUC-Sit-110735	Setaria italica	34.35	7.00e-17	81.60
IUUC-Sly-111126	Solanum lycopersicum	40.31	7.00e-17	81.60
IUUC-Stu-112780	Solanum tuberosum	39.06	3.00e-20	92.80
IUUC-Sar-113418	Sorex araneus	88.19	0.00e+00	1088.00
IUUC-Sbi-113925	Sorghum bicolor	34.35	2.00e-16	80.50
IUUC-Sre-114917	Sporisorium reilianum	39.76	5.00e-08	52.00
IUUC-Ssc-115712	Sus scrofa	89.53	0.00e+00	1296.00
IUUC-Tgu-117148	Taeniopygia guttata	72.79	0.00e+00	998.00
IUUC-Tru-117831	Takifugu rubripes	56.12	2.00e-120	426.00
IUUC-Tsy-118917	Tarsius syrichta	88.17	0.00e+00	1078.00
IUUC-Tni-120783	Tetraodon nigroviridis	46.10	1.00e-153	536.00
IUUC-Tca-121430	Theobroma cacao	45.31	7.00e-07	48.50
IUUC-Tae-123752	Triticum aestivum	33.33	3.00e-16	79.30
IUUC-Tur-126238	Triticum urartu	34.38	2.00e-15	76.60
IUUC-Ttr-128615	Tursiops truncatus	87.23	0.00e+00	1085.00
IUUC-Vpa-130531	Vicugna pacos	93.24	0.00e+00	1192.00
IUUC-Vvi-131607	Vitis vinifera	39.06	3.00e-14	72.80
IUUC-Xtr-132787	Xenopus tropicalis	60.34	0.00e+00	719.00
IUUC-Xma-133815	Xiphophorus maculatus	45.86	1.00e-155	543.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence