iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Csa-023299

Ensembl Protein ID

ENSCSAP00000013665.1

UniProt Accession

A0A0D9RYH6; A0A0D9RYH6_CHLSB

Genbank Protein ID

ENSCSAP00000013665

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AQIB01113382

Gene Name

TDRD3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCSAG00000017640.1	ENSCSAT00000015735.1	ENSCSAP00000013665.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.10e-08	34.9	288	325

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           de +l  ++eMGF++e+ +qaL +++nnleaA++ Ll+
   Q: 288  DEKALKHITEMGFSKEASRQALMDNGNNLEAALNVLLT 325
           78999*******************************97 PP

Organism

Chlorocebus sabaeus

Protein Sequence
(Fasta)

MAQVANAALS QAGWYLSDEG IEACTSSPDK VNVNDIILIA LNTDLRTIGK KFLPSDINSG 60
KVEKLEGPCV LQIQKIRNVA APKDNEESQA APRMLRLQMT DGHISCTAVE FSYMSKISLN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCACCCCAA CCCCCCAGCA CCCCCGGCTT AAGCAGCTAC CATGGCCCAG GTGGCCAACG 60
CGGCGTTGTC CCAGGCGGGT TGGTAAGTGG CGAGTCCCGC CGGCTGCCGG GCCGCGGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR033472--DUF1767
IPR013894--RMI1_N
IPR002999--Tudor
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50304--TUDOR
PS50030--UBA

Pfam

PF08585--RMI1_N
PF00567--TUDOR
PF00627--UBA

SMART

SM01161--DUF1767
SM00333--TUDOR
SM00165--UBA

Gene Ontology

GO:0035145--C:exon-exon junction complex
GO:0003682--F:chromatin binding
GO:0003723--F:RNA binding
GO:0003713--F:transcription coactivator activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000323	Aegilops tauschii	31.51	8.00e-16	77.80
IUUC-Aml-001751	Ailuropoda melanoleuca	91.67	0.00e+00	1306.00
IUUC-Atr-002788	Amborella trichopoda	31.75	3.00e-21	95.90
IUUC-Apl-004055	Anas platyrhynchos	75.95	0.00e+00	950.00
IUUC-Aca-004367	Anolis carolinensis	72.08	0.00e+00	1022.00
IUUC-Aly-006072	Arabidopsis lyrata	36.31	6.00e-23	101.00
IUUC-Ath-007491	Arabidopsis thaliana	35.67	2.00e-22	100.00
IUUC-Ame-011439	Astyanax mexicanus	49.56	3.00e-161	562.00
IUUC-Bta-012894	Bos taurus	88.17	0.00e+00	1283.00
IUUC-Bdi-014462	Brachypodium distachyon	31.05	3.00e-21	95.90
IUUC-Bol-015343	Brassica oleracea	37.50	2.00e-23	103.00
IUUC-Bra-016787	Brassica rapa	37.11	5.00e-23	101.00
IUUC-Cel-018154	Caenorhabditis elegans	33.06	6.00e-28	119.00
IUUC-Cja-019364	Callithrix jacchus	94.62	0.00e+00	1191.00
IUUC-Cfa-021166	Canis familiaris	90.31	0.00e+00	1266.00
IUUC-Cpo-021678	Cavia porcellus	81.89	0.00e+00	956.00
IUUC-Cho-024694	Choloepus hoffmanni	95.82	9.00e-140	490.00
IUUC-Cin-025191	Ciona intestinalis	42.24	4.00e-44	171.00
IUUC-Csv-026348	Ciona savignyi	50.98	6.00e-12	62.00
IUUC-Dre-028715	Danio rerio	50.13	2.00e-172	598.00
IUUC-Dno-030091	Dasypus novemcinctus	88.04	0.00e+00	1303.00
IUUC-Dor-030807	Dipodomys ordii	79.26	0.00e+00	975.00
IUUC-Dse-031459	Dothistroma septosporum	23.83	3.80e-02	33.50
IUUC-Dme-031770	Drosophila melanogaster	34.04	6.00e-43	169.00
IUUC-Ete-032507	Echinops telfairi	66.73	0.00e+00	677.00
IUUC-Eca-033406	Equus caballus	90.07	0.00e+00	1028.00
IUUC-Eeu-034600	Erinaceus europaeus	80.80	0.00e+00	960.00
IUUC-Fca-035916	Felis catus	91.37	0.00e+00	1300.00
IUUC-Fal-036658	Ficedula albicollis	74.36	0.00e+00	1001.00
IUUC-Gmo-038974	Gadus morhua	56.22	3.00e-104	372.00
IUUC-Gga-040195	Gallus gallus	75.34	0.00e+00	1070.00
IUUC-Gac-042537	Gasterosteus aculeatus	46.91	4.00e-165	575.00
IUUC-Gma-044234	Glycine max	35.57	7.00e-25	108.00
IUUC-Ggo-044715	Gorilla gorilla	96.32	0.00e+00	1260.00
IUUC-Hsa-045814	Homo sapiens	97.85	0.00e+00	1459.00
IUUC-Hvu-047365	Hordeum vulgare	30.00	3.00e-16	79.70
IUUC-Itr-047866	Ictidomys tridecemlineatus	90.68	0.00e+00	1300.00
IUUC-Lch-050393	Latimeria chalumnae	62.52	0.00e+00	818.00
IUUC-Lpe-050691	Leersia perrieri	32.91	6.00e-20	92.00
IUUC-Loc-052859	Lepisosteus oculatus	57.69	0.00e+00	712.00
IUUC-Laf-053953	Loxodonta africana	86.96	0.00e+00	850.00
IUUC-Mcc-055846	Macaca mulatta	99.32	0.00e+00	1457.00
IUUC-Meu-056790	Macropus eugenii	69.17	0.00e+00	857.00
IUUC-Mtr-058749	Medicago truncatula	36.18	7.00e-22	98.20
IUUC-Mla-058959	Melampsora laricipopulina	39.71	2.00e-06	46.20
IUUC-Mga-059656	Meleagris gallopavo	73.92	0.00e+00	991.00
IUUC-Mmr-061089	Microcebus murinus	90.86	0.00e+00	1275.00
IUUC-Mdo-063043	Monodelphis domestica	69.11	0.00e+00	744.00
IUUC-Mmu-063654	Mus musculus	84.27	0.00e+00	1193.00
IUUC-Mac-064947	Musa acuminata	34.57	4.00e-20	92.40
IUUC-Mpu-066115	Mustela putorius furo	90.86	0.00e+00	1047.00
IUUC-Mlu-066974	Myotis lucifugus	84.71	0.00e+00	1157.00
IUUC-Nle-069184	Nomascus leucogenys	96.91	0.00e+00	1446.00
IUUC-Opr-070770	Ochotona princeps	81.41	0.00e+00	1026.00
IUUC-Ont-072040	Oreochromis niloticus	55.51	1.00e-142	500.00
IUUC-Oan-073448	Ornithorhynchus anatinus	84.13	2.00e-69	254.00
IUUC-Ocu-074405	Oryctolagus cuniculus	92.34	0.00e+00	1337.00
IUUC-Oba-075977	Oryza barthii	30.10	1.00e-13	70.50
IUUC-Obr-076298	Oryza brachyantha	30.96	1.00e-18	87.40
IUUC-Ogl-077706	Oryza glaberrima	30.61	1.00e-13	70.50
IUUC-Ogu-078381	Oryza glumaepatula	30.00	4.00e-14	72.40
IUUC-Oin-080150	Oryza indica	31.00	5.00e-14	72.40
IUUC-Ome-081153	Oryza meridionalis	29.69	2.00e-13	70.50
IUUC-Oni-083115	Oryza nivara	30.50	1.00e-13	70.90
IUUC-Opu-083860	Oryza punctata	30.65	6.00e-19	88.60
IUUC-Oru-084859	Oryza rufipogon	31.00	8.00e-14	71.60
IUUC-Osa-085567	Oryza sativa	31.00	1.00e-12	67.80
IUUC-Ola-087049	Oryzias latipes	47.65	5.00e-171	594.00
IUUC-Oga-088455	Otolemur garnettii	91.13	0.00e+00	1337.00
IUUC-Oar-090096	Ovis aries	90.82	0.00e+00	1318.00
IUUC-Ptr-090974	Pan troglodytes	97.08	0.00e+00	1277.00
IUUC-Pan-092657	Papio anubis	99.33	0.00e+00	1489.00
IUUC-Psi-093113	Pelodiscus sinensis	75.04	0.00e+00	933.00
IUUC-Ppa-095466	Physcomitrella patens	37.93	3.00e-23	102.00
IUUC-Pfo-096631	Poecilia formosa	48.43	1.00e-168	587.00
IUUC-Pab-098070	Pongo abelii	97.31	0.00e+00	1454.00
IUUC-Pop-099235	Populus trichocarpa	35.43	2.00e-22	100.00
IUUC-Pca-101032	Procavia capensis	81.72	0.00e+00	1048.00
IUUC-Ppe-101793	Prunus persica	32.99	3.00e-23	102.00
IUUC-Pva-102290	Pteropus vampyrus	89.09	0.00e+00	1146.00
IUUC-Rno-105080	Rattus norvegicus	83.56	0.00e+00	995.00
IUUC-Sce-106191	Saccharomyces cerevisiae	40.00	3.00e-03	37.00
IUUC-Sha-107598	Sarcophilus harrisii	78.61	0.00e+00	1118.00
IUUC-Sit-110735	Setaria italica	31.00	2.00e-19	90.50
IUUC-Sly-111126	Solanum lycopersicum	41.45	3.00e-21	95.90
IUUC-Stu-112780	Solanum tuberosum	35.14	1.00e-24	107.00
IUUC-Sar-113418	Sorex araneus	86.50	0.00e+00	1076.00
IUUC-Sbi-113925	Sorghum bicolor	30.77	2.00e-20	93.60
IUUC-Sre-114917	Sporisorium reilianum	38.55	3.00e-07	50.10
IUUC-Ssc-115712	Sus scrofa	91.14	0.00e+00	1348.00
IUUC-Tgu-117148	Taeniopygia guttata	75.20	0.00e+00	1057.00
IUUC-Tru-117831	Takifugu rubripes	48.27	2.00e-166	579.00
IUUC-Tsy-118917	Tarsius syrichta	90.48	0.00e+00	1109.00
IUUC-Tni-120783	Tetraodon nigroviridis	56.80	4.00e-130	458.00
IUUC-Tca-121430	Theobroma cacao	37.13	2.00e-09	56.60
IUUC-Tae-123752	Triticum aestivum	31.38	6.00e-16	78.60
IUUC-Tur-126238	Triticum urartu	31.05	1.00e-15	77.40
IUUC-Ttr-128615	Tursiops truncatus	84.15	0.00e+00	1058.00
IUUC-Vpa-130531	Vicugna pacos	90.94	0.00e+00	1177.00
IUUC-Vvi-131607	Vitis vinifera	39.74	1.00e-17	84.30
IUUC-Xtr-132787	Xenopus tropicalis	58.98	0.00e+00	746.00
IUUC-Xma-133815	Xiphophorus maculatus	48.04	3.00e-169	588.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence