iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093113

Ensembl Protein ID

ENSPSIP00000015457.1

UniProt Accession

K7G596; K7G596_PELSI

Genbank Protein ID

ENSPSIP00000015457

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01022411

Gene Name

TDRD3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000013821.1	ENSPSIT00000015529.1	ENSPSIP00000015457.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	5.30e-09	36.0	195	232

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           de +l  ++eMGF++e+a+qaL +++n+leaA+++Ll+
   Q: 195  DEKALKHITEMGFSKEAARQALMDNSNSLEAALNFLLN 232
           78999*******************************97 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

MLRLQMTDGH TSCTAIEYNY MSKISLNTPP GTKIKLSGII EVKNGFLLLD DNNTVVLGGE 60
VEHLIEKWEL QRSLSKHNRS NIGTEGGPPP FVPFGQKCVS SVQVDSKELD RRKTLQMMIT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTATCTTTCA GATGAAGGAA TTGAAGCTTG CACAAATTCT TCTGACAAAA TCAATATAAG 60
TGACGTTATC CTGATTGCCC TTAATGTAGG TTACAGTTGA GAAATTTTTG AAAAAAATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR013894--RMI1_N
IPR002999--Tudor
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50304--TUDOR
PS50030--UBA

Pfam

PF08585--RMI1_N
PF00567--TUDOR
PF00627--UBA

SMART

SM00333--TUDOR
SM00165--UBA

Gene Ontology

GO:0035145--C:exon-exon junction complex
GO:0003682--F:chromatin binding
GO:0003723--F:RNA binding
GO:0003713--F:transcription coactivator activity

KEGG

pss:102461515

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000323	Aegilops tauschii	35.79	3.00e-12	65.90
IUUC-Aml-001751	Ailuropoda melanoleuca	75.88	0.00e+00	915.00
IUUC-Atr-002788	Amborella trichopoda	33.68	6.00e-13	68.60
IUUC-Apl-004055	Anas platyrhynchos	84.18	0.00e+00	1011.00
IUUC-Aca-004367	Anolis carolinensis	78.07	0.00e+00	967.00
IUUC-Aly-006072	Arabidopsis lyrata	35.87	6.00e-14	71.60
IUUC-Ath-007491	Arabidopsis thaliana	34.78	2.00e-13	70.10
IUUC-Ame-011439	Astyanax mexicanus	64.09	3.00e-73	269.00
IUUC-Bta-012894	Bos taurus	74.73	0.00e+00	916.00
IUUC-Bdi-014462	Brachypodium distachyon	36.46	3.00e-13	69.30
IUUC-Bol-015343	Brassica oleracea	35.05	5.00e-13	68.60
IUUC-Bra-016787	Brassica rapa	36.08	5.00e-13	68.60
IUUC-Cel-018154	Caenorhabditis elegans	34.64	2.00e-17	84.30
IUUC-Cja-019364	Callithrix jacchus	75.80	0.00e+00	923.00
IUUC-Cfa-021166	Canis familiaris	75.30	0.00e+00	888.00
IUUC-Cpo-021678	Cavia porcellus	68.69	0.00e+00	787.00
IUUC-Csa-023299	Chlorocebus sabaeus	75.04	0.00e+00	941.00
IUUC-Cho-024694	Choloepus hoffmanni	86.76	5.00e-126	444.00
IUUC-Cin-025191	Ciona intestinalis	39.72	2.00e-21	95.50
IUUC-Csv-026348	Ciona savignyi	52.94	8.00e-12	61.20
IUUC-Dre-028715	Danio rerio	46.99	9.00e-135	473.00
IUUC-Dno-030091	Dasypus novemcinctus	75.19	0.00e+00	943.00
IUUC-Dor-030807	Dipodomys ordii	65.24	0.00e+00	760.00
IUUC-Dme-031770	Drosophila melanogaster	28.87	1.00e-20	95.10
IUUC-Ete-032507	Echinops telfairi	57.62	1.00e-161	563.00
IUUC-Eca-033406	Equus caballus	75.38	0.00e+00	842.00
IUUC-Eeu-034600	Erinaceus europaeus	68.71	0.00e+00	787.00
IUUC-Fca-035916	Felis catus	75.80	0.00e+00	912.00
IUUC-Fal-036658	Ficedula albicollis	82.33	0.00e+00	969.00
IUUC-Gmo-038974	Gadus morhua	55.56	6.00e-70	258.00
IUUC-Gga-040195	Gallus gallus	82.95	0.00e+00	1047.00
IUUC-Gac-042537	Gasterosteus aculeatus	56.57	9.00e-93	334.00
IUUC-Gma-044234	Glycine max	41.41	9.00e-17	81.30
IUUC-Ggo-044715	Gorilla gorilla	74.81	0.00e+00	939.00
IUUC-Hsa-045814	Homo sapiens	75.96	0.00e+00	951.00
IUUC-Hvu-047365	Hordeum vulgare	36.46	2.00e-12	66.60
IUUC-Itr-047866	Ictidomys tridecemlineatus	74.58	0.00e+00	922.00
IUUC-Kpa-049313	Komagataella pastoris	28.57	4.00e-03	36.60
IUUC-Lch-050393	Latimeria chalumnae	61.09	0.00e+00	684.00
IUUC-Lpe-050691	Leersia perrieri	36.46	7.00e-14	71.60
IUUC-Loc-052859	Lepisosteus oculatus	54.68	2.00e-158	552.00
IUUC-Laf-053953	Loxodonta africana	71.60	0.00e+00	652.00
IUUC-Mcc-055846	Macaca mulatta	74.73	0.00e+00	937.00
IUUC-Meu-056790	Macropus eugenii	66.31	0.00e+00	806.00
IUUC-Mtr-058749	Medicago truncatula	40.66	1.00e-14	73.90
IUUC-Mla-058959	Melampsora laricipopulina	44.62	3.00e-08	52.40
IUUC-Mga-059656	Meleagris gallopavo	82.64	0.00e+00	963.00
IUUC-Mmr-061089	Microcebus murinus	74.43	0.00e+00	860.00
IUUC-Mdo-063043	Monodelphis domestica	66.50	0.00e+00	721.00
IUUC-Mmu-063654	Mus musculus	69.07	0.00e+00	811.00
IUUC-Mac-064947	Musa acuminata	39.80	6.00e-10	58.20
IUUC-Mpu-066115	Mustela putorius furo	76.23	0.00e+00	850.00
IUUC-Mlu-066974	Myotis lucifugus	76.39	0.00e+00	905.00
IUUC-Nle-069184	Nomascus leucogenys	75.34	0.00e+00	951.00
IUUC-Opr-070770	Ochotona princeps	65.24	0.00e+00	790.00
IUUC-Ont-072040	Oreochromis niloticus	46.21	5.00e-138	484.00
IUUC-Oan-073448	Ornithorhynchus anatinus	84.13	3.00e-69	253.00
IUUC-Ocu-074405	Oryctolagus cuniculus	75.50	0.00e+00	914.00
IUUC-Oba-075977	Oryza barthii	35.42	3.00e-08	52.80
IUUC-Obr-076298	Oryza brachyantha	35.42	4.00e-13	68.90
IUUC-Ogl-077706	Oryza glaberrima	36.46	2.00e-08	53.10
IUUC-Ogu-078381	Oryza glumaepatula	35.42	1.00e-08	54.30
IUUC-Oin-080150	Oryza indica	36.46	2.00e-08	53.10
IUUC-Ome-081153	Oryza meridionalis	30.46	6.00e-08	51.60
IUUC-Oni-083115	Oryza nivara	35.42	4.00e-08	52.40
IUUC-Opu-083860	Oryza punctata	34.38	2.00e-12	66.60
IUUC-Oru-084859	Oryza rufipogon	36.46	2.00e-08	53.10
IUUC-Osa-085567	Oryza sativa	36.46	4.00e-07	48.90
IUUC-Ola-087049	Oryzias latipes	46.04	7.00e-129	454.00
IUUC-Olu-087599	Ostreococcus lucimarinus	34.88	5.80e-02	31.60
IUUC-Oga-088455	Otolemur garnettii	74.73	0.00e+00	931.00
IUUC-Oar-090096	Ovis aries	74.58	0.00e+00	915.00
IUUC-Ptr-090974	Pan troglodytes	75.80	0.00e+00	959.00
IUUC-Pan-092657	Papio anubis	75.19	0.00e+00	946.00
IUUC-Ppa-095466	Physcomitrella patens	44.57	1.00e-17	84.30
IUUC-Pfo-096631	Poecilia formosa	45.01	4.00e-128	452.00
IUUC-Pab-098070	Pongo abelii	75.65	0.00e+00	951.00
IUUC-Pop-099235	Populus trichocarpa	35.42	4.00e-13	69.30
IUUC-Pca-101032	Procavia capensis	68.87	0.00e+00	857.00
IUUC-Ppe-101793	Prunus persica	35.42	3.00e-15	75.90
IUUC-Pva-102290	Pteropus vampyrus	74.27	0.00e+00	921.00
IUUC-Rno-105080	Rattus norvegicus	68.91	0.00e+00	783.00
IUUC-Sce-106191	Saccharomyces cerevisiae	38.78	5.00e-03	36.20
IUUC-Sha-107598	Sarcophilus harrisii	74.66	0.00e+00	910.00
IUUC-Sit-110735	Setaria italica	35.42	5.00e-13	68.60
IUUC-Sly-111126	Solanum lycopersicum	37.63	1.00e-13	70.50
IUUC-Stu-112780	Solanum tuberosum	38.95	8.00e-16	77.80
IUUC-Sar-113418	Sorex araneus	74.62	0.00e+00	895.00
IUUC-Sbi-113925	Sorghum bicolor	36.46	2.00e-12	67.00
IUUC-Ssc-115712	Sus scrofa	75.38	0.00e+00	926.00
IUUC-Tgu-117148	Taeniopygia guttata	82.64	0.00e+00	1013.00
IUUC-Tru-117831	Takifugu rubripes	45.70	2.00e-130	459.00
IUUC-Tsy-118917	Tarsius syrichta	72.74	0.00e+00	857.00
IUUC-Tni-120783	Tetraodon nigroviridis	47.04	3.00e-134	472.00
IUUC-Tca-121430	Theobroma cacao	42.19	9.00e-06	44.70
IUUC-Tae-123752	Triticum aestivum	35.79	3.00e-12	66.20
IUUC-Tur-126238	Triticum urartu	37.50	4.00e-12	65.50
IUUC-Ttr-128615	Tursiops truncatus	69.94	0.00e+00	831.00
IUUC-Vpa-130531	Vicugna pacos	76.42	0.00e+00	940.00
IUUC-Vvi-131607	Vitis vinifera	41.76	5.00e-13	68.60
IUUC-Xtr-132787	Xenopus tropicalis	61.71	0.00e+00	715.00
IUUC-Xma-133815	Xiphophorus maculatus	53.08	9.00e-95	340.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence