iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cfa-020212

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAEX03015319

Gene Name

KDM5A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCAFG00000015781.3	ENSCAFT00000025008.3	ENSCAFP00000023208.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.20e-18	66.5	295	342

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           vC +Cg+g +++ +l+ C+ C++ +H  Cl ++  +++p+ + w CpkC +
   Q: 295  VCMFCGRGNNED-KLLLCDGCDDSYHTFCLIPP-LPDVPKGD-WRCPKCVA 342
           8*********88.6*******************.*******7.******75 PP

Organism

Canis familiaris

Protein Sequence
(Fasta)

MAGVGPGGYA AEFVPPPECP VFEPSWEEFT DPLSFIGRIR PLAEKTGICK IRPPKDWQPP 60
FACEVKSFRF TPRVQRLNEL EAMTRVRLDF LDQLAKFWEL QGSTLKIPVV ERKILDLYAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGGCG TGGGGCCGGG GGGCTACGCG GCCGAGTTTG TGCCGCCGCC GGAGTGCCCA 60
GTCTTTGAGC CCAGCTGGGA GGAGTTCACG GACCCGCTCA GCTTCATCGG CCGCATCCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001606--ARID_dom
IPR003347--JmjC_dom
IPR003349--JmjN
IPR013637--Lys_sp_deMease-like_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51011--ARID
PS51184--JMJC
PS51183--JMJN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01388--ARID
PF02373--JmjC
PF02375--JmjN
PF00628--PHD
PF08429--PLU-1
PF02928--zf-C5HC2

SMART

SM00501--BRIGHT
SM00558--JmjC
SM00545--JmjN
SM00249--PHD

Gene Ontology

GO:0019907--C:cyclin-dependent protein kinase activating kinase holoenzyme complex
GO:0032993--C:protein-DNA complex
GO:0031490--F:chromatin DNA binding
GO:0016706--F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0003713--F:transcription coactivator activity
GO:0008270--F:zinc ion binding
GO:0032922--P:circadian regulation of gene expression
GO:0034720--P:histone H3-K4 demethylation
GO:1901726--P:negative regulation of histone deacetylase activity
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0045893--P:positive regulation of transcription, DNA-templated

KEGG

cfa:477727

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002061	Ailuropoda melanoleuca	98.82	0.00e+00	2985.00
IUUC-Atr-002595	Amborella trichopoda	30.31	4.00e-123	436.00
IUUC-Apl-004141	Anas platyrhynchos	91.15	0.00e+00	2792.00
IUUC-Aca-004952	Anolis carolinensis	89.95	0.00e+00	2818.00
IUUC-Ate-010453	Aspergillus terreus	29.07	1.00e-113	405.00
IUUC-Ame-011323	Astyanax mexicanus	75.83	0.00e+00	2038.00
IUUC-Bta-012902	Bos taurus	97.05	0.00e+00	2967.00
IUUC-Bdi-014050	Brachypodium distachyon	29.62	4.00e-118	420.00
IUUC-Cja-018988	Callithrix jacchus	95.32	0.00e+00	2772.00
IUUC-Cpo-022221	Cavia porcellus	96.09	0.00e+00	2066.00
IUUC-Csa-023575	Chlorocebus sabaeus	97.78	0.00e+00	2867.00
IUUC-Cho-024280	Choloepus hoffmanni	92.54	0.00e+00	2758.00
IUUC-Cin-025321	Ciona intestinalis	48.08	0.00e+00	1058.00
IUUC-Csv-026185	Ciona savignyi	47.69	0.00e+00	1150.00
IUUC-Dre-027909	Danio rerio	74.85	0.00e+00	1655.00
IUUC-Dno-029473	Dasypus novemcinctus	97.14	0.00e+00	2716.00
IUUC-Dor-030281	Dipodomys ordii	94.34	0.00e+00	1199.00
IUUC-Dme-032021	Drosophila melanogaster	46.99	0.00e+00	1120.00
IUUC-Eca-034265	Equus caballus	96.75	0.00e+00	2972.00
IUUC-Fca-035476	Felis catus	97.81	0.00e+00	2980.00
IUUC-Fal-037078	Ficedula albicollis	90.66	0.00e+00	2458.00
IUUC-Ggr-039929	Gaeumannomyces graminis	29.55	5.00e-105	376.00
IUUC-Gga-040466	Gallus gallus	89.98	0.00e+00	2873.00
IUUC-Gac-042566	Gasterosteus aculeatus	74.92	0.00e+00	2091.00
IUUC-Ggo-044524	Gorilla gorilla	90.76	0.00e+00	2495.00
IUUC-Hsa-045821	Homo sapiens	97.63	0.00e+00	2966.00
IUUC-Kpa-049245	Komagataella pastoris	23.32	1.00e-37	152.00
IUUC-Lch-050630	Latimeria chalumnae	74.12	0.00e+00	2120.00
IUUC-Loc-051963	Lepisosteus oculatus	75.62	0.00e+00	2067.00
IUUC-Laf-053918	Loxodonta africana	91.32	0.00e+00	2588.00
IUUC-Mcc-055672	Macaca mulatta	96.26	0.00e+00	2964.00
IUUC-Mor-057198	Magnaporthe oryzae	29.67	4.00e-115	410.00
IUUC-Mpo-057317	Magnaporthe poae	29.53	3.00e-106	380.00
IUUC-Mga-059192	Meleagris gallopavo	82.21	0.00e+00	2418.00
IUUC-Mmr-060968	Microcebus murinus	95.74	0.00e+00	2984.00
IUUC-Mdo-062945	Monodelphis domestica	94.70	0.00e+00	2783.00
IUUC-Mmu-063614	Mus musculus	95.68	0.00e+00	2910.00
IUUC-Mpu-066349	Mustela putorius furo	98.53	0.00e+00	2855.00
IUUC-Mlu-067363	Myotis lucifugus	97.81	0.00e+00	3049.00
IUUC-Nle-070142	Nomascus leucogenys	97.63	0.00e+00	2965.00
IUUC-Opr-071002	Ochotona princeps	89.49	0.00e+00	1382.00
IUUC-Ont-072471	Oreochromis niloticus	77.28	0.00e+00	1862.00
IUUC-Oan-072797	Ornithorhynchus anatinus	79.15	0.00e+00	2026.00
IUUC-Ocu-074164	Oryctolagus cuniculus	96.22	0.00e+00	3022.00
IUUC-Oba-075388	Oryza barthii	31.65	6.00e-83	303.00
IUUC-Obr-076296	Oryza brachyantha	34.56	4.00e-97	350.00
IUUC-Ogu-079040	Oryza glumaepatula	31.87	2.00e-82	301.00
IUUC-Ome-081764	Oryza meridionalis	34.61	2.00e-100	361.00
IUUC-Oni-083012	Oryza nivara	31.87	2.00e-82	301.00
IUUC-Oru-084630	Oryza rufipogon	31.37	1.00e-81	299.00
IUUC-Ola-087076	Oryzias latipes	74.54	0.00e+00	2082.00
IUUC-Oga-088350	Otolemur garnettii	95.21	0.00e+00	2892.00
IUUC-Oar-090045	Ovis aries	96.98	0.00e+00	2950.00
IUUC-Ptr-091199	Pan troglodytes	97.10	0.00e+00	2954.00
IUUC-Pan-092094	Papio anubis	93.09	0.00e+00	2892.00
IUUC-Psi-093550	Pelodiscus sinensis	90.53	0.00e+00	2738.00
IUUC-Pno-094879	Phaeosphaeria nodorum	29.01	5.00e-114	406.00
IUUC-Ppa-095839	Physcomitrella patens	35.20	6.00e-16	80.90
IUUC-Pfo-097266	Poecilia formosa	77.24	0.00e+00	1863.00
IUUC-Pab-098576	Pongo abelii	97.81	0.00e+00	2964.00
IUUC-Pca-100123	Procavia capensis	92.82	0.00e+00	1616.00
IUUC-Pva-103109	Pteropus vampyrus	92.07	0.00e+00	2811.00
IUUC-Pgr-103434	Puccinia graminis	27.88	5.00e-38	151.00
IUUC-Pte-104195	Pyrenophora teres	29.67	2.00e-117	418.00
IUUC-Pyt-104566	Pyrenophora triticirepentis	29.76	2.00e-119	424.00
IUUC-Rno-105664	Rattus norvegicus	95.74	0.00e+00	2908.00
IUUC-Sha-107506	Sarcophilus harrisii	93.07	0.00e+00	2529.00
IUUC-Sja-107734	Schizosaccharomyces japonicus	20.99	2.00e-32	135.00
IUUC-Smo-108843	Selaginella moellendorffii	52.08	1.00e-10	62.40
IUUC-Sit-110534	Setaria italica	29.59	2.00e-119	424.00
IUUC-Sar-113052	Sorex araneus	96.57	0.00e+00	2968.00
IUUC-Tgu-116613	Taeniopygia guttata	90.23	0.00e+00	2789.00
IUUC-Tru-118604	Takifugu rubripes	74.56	0.00e+00	2131.00
IUUC-Tsy-119237	Tarsius syrichta	96.78	0.00e+00	1280.00
IUUC-Tni-120779	Tetraodon nigroviridis	74.14	0.00e+00	2106.00
IUUC-Tae-125894	Triticum aestivum	34.49	2.00e-108	388.00
IUUC-Tme-127087	Tuber melanosporum	30.49	4.00e-129	456.00
IUUC-Tbe-127627	Tupaia belangeri	98.48	0.00e+00	805.00
IUUC-Ttr-129242	Tursiops truncatus	95.56	0.00e+00	2872.00
IUUC-Vda-129733	Verticillium dahliae	29.18	3.00e-101	363.00
IUUC-Vpa-130429	Vicugna pacos	90.95	0.00e+00	1475.00
IUUC-Xtr-131762	Xenopus tropicalis	75.59	0.00e+00	2238.00
IUUC-Xma-133693	Xiphophorus maculatus	74.14	0.00e+00	2131.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence