iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058453

Ensembl Protein ID

AES96966

UniProt Accession

G7JXW5; A0A0C3XIY0; G7JXW5_MEDTR

Genbank Protein ID

AES96966.2

Protein Name

Zinc finger, C3HC4 type (RING finger) protein

Genbank Nucleotide ID

CM001221

Gene Name

MTR_5g043680

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_5g043680	AES96966	AES96966

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-06	30.4	46	100

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadCl..qkw.....pglknssskefrCPlC 45
           C+iC+e+f   ++ p+vl CgH+ +++C+   +w     p ++     + +CP+C
   Q: 46   CPICWESFnivENVPYVLWCGHTLCKNCVlgLQWavmkfPTQQIRIPFFVSCPWC 100
           ********999999**************98999977765555545555557**** PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MMWNFASHAL TSIGMKRSST EPILSCAECS DDEVCSNASK DEGLECPICW ESFNIVENVP 60
YVLWCGHTLC KNCVLGLQWA VMKFPTQQIR IPFFVSCPWC HLLSFRFIYK GNMKFPRKNF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCAAATTAA GCTATGCCAA CCTTATTAAC ACCCAAAGCA AAACTAACTA AACGATCCTC 60
CAAAACGACA TCGTTTCCAC TCATTTTCCC TTCATATAAA TAAATCACTC ATTCTTTTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13445--zf-RING_UBOX

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_5g043680

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006067	Arabidopsis lyrata	58.94	1.00e-79	288.00
IUUC-Ath-007395	Arabidopsis thaliana	56.30	5.00e-71	259.00
IUUC-Bra-017972	Brassica rapa	52.47	8.00e-56	209.00
IUUC-Gma-044330	Glycine max	79.77	2.00e-113	400.00
IUUC-Loc-051895	Lepisosteus oculatus	32.61	1.00e-06	45.10
IUUC-Laf-053629	Loxodonta africana	33.82	8.00e-07	46.60
IUUC-Mmu-063251	Mus musculus	34.29	3.00e-07	48.50
IUUC-Pca-100264	Procavia capensis	33.33	2.00e-07	48.90
IUUC-Ppe-101923	Prunus persica	62.29	5.00e-75	273.00
IUUC-Rno-106092	Rattus norvegicus	34.29	3.00e-07	48.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence