iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-131903

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Josephin domain-containing 1; LOC100158575 protein

Genbank Nucleotide ID

AAMC01026212

Gene Name

josd1; LOC100158575

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000006895.3	ENSXETT00000015086.3	ENSXETP00000015086.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/Josephin	2.30e-90	301.3	1	200

Active Site

Position(s)	Description	Evidence
35	N/A	{ECO:0000256\|PROSITE-ProRule:PRU00331}
138		{ECO:0000256\|PROSITE-ProRule:PRU00331}
153		{ECO:0000256\|PROSITE-ProRule:PRU00331}

Domain Profile

DUB/Josephin

   S: 1    msqvpg...........aqaapesiyhekqrrelCalhalnnvlqd.elfsreeldeiakrldeeerlqPs.kslldtGnydvnvisaa 76
           ms+vp+            ++ p++iyhekqrrelCalhalnnv+qd  +f+re+l+ei++rl++++ ++P+ k++l++Gnydvnvi+aa
   Q: 1    MSCVPWkgdkaksgleaQEPLPPQIYHEKQRRELCALHALNNVFQDaGAFTRETLQEIFQRLSPNTLVTPHkKNVLGNGNYDVNVIMAA 89
           89*************966789*************************99***********************99**************** PP
   S: 77   lkvlGleavwfdkrrelqklaldnvlgfilnlpsslslgllklplkkqhWvtvrkvgkayynldsklkaPeligdetelrkflakllqq 165
           l+++G+eavw+dkrr+++ + l+nv gfi+nlpssls+g+lklplk+qhW++vr+vg++yynldsklk Pe+ig e+ lrkf++ +l++
   Q: 90   LQTKGYEAVWWDKRRDVNLICLSNVTGFIMNLPSSLSWGPLKLPLKRQHWICVREVGGNYYNLDSKLKRPEWIGSEDDLRKFFRYHLRG 178
           ***************************************************************************************** PP
   S: 166  kyselllvvkeevedkesdqrld 188
           k++elllvv+eeve ++ + r+d
   Q: 179  KNCELLLVVPEEVEVHQRW-RTD 200
           *******************.777 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MSCVPWKGDK AKSGLEAQEP LPPQIYHEKQ RRELCALHAL NNVFQDAGAF TRETLQEIFQ 60
RLSPNTLVTP HKKNVLGNGN YDVNVIMAAL QTKGYEAVWW DKRRDVNLIC LSNVTGFIMN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTTACATAG TCAGATTTTG TTCAGATTTT TGTCAGCAAA ACTTTAATCA CTACTGAGGA 60
ATGGAGGAAA AAGAAAGATG TGGTTGAGCG TTTTCTGCCT TCTGATTCAT TCTTGGAACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-1185--Reference proteome

Interpro

IPR006155--Josephin

PROSITE

PS50957--JOSEPHIN

Pfam

PF02099--Josephin

SMART

SM01246--Josephin

Gene Ontology

GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination

KEGG

xtr:100158575

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002429	Ailuropoda melanoleuca	84.65	6.00e-94	336.00
IUUC-Apl-003240	Anas platyrhynchos	81.59	1.00e-85	308.00
IUUC-Aca-004262	Anolis carolinensis	84.08	8.00e-92	328.00
IUUC-Aly-005621	Arabidopsis lyrata	39.52	2.00e-26	113.00
IUUC-Ath-007306	Arabidopsis thaliana	38.32	9.00e-27	114.00
IUUC-Ame-011040	Astyanax mexicanus	69.59	5.00e-79	286.00
IUUC-Bta-012440	Bos taurus	84.16	1.00e-93	334.00
IUUC-Bol-015647	Brassica oleracea	39.01	3.00e-27	114.00
IUUC-Bra-017811	Brassica rapa	37.95	2.00e-25	108.00
IUUC-Cja-019461	Callithrix jacchus	84.16	2.00e-93	334.00
IUUC-Cfa-021002	Canis familiaris	84.65	6.00e-94	336.00
IUUC-Cpo-021309	Cavia porcellus	85.15	1.00e-94	338.00
IUUC-Csa-023194	Chlorocebus sabaeus	85.64	2.00e-95	340.00
IUUC-Cho-025019	Choloepus hoffmanni	84.16	2.00e-94	337.00
IUUC-Cin-025666	Ciona intestinalis	58.90	1.00e-54	205.00
IUUC-Csv-026011	Ciona savignyi	56.78	6.00e-61	226.00
IUUC-Dre-028692	Danio rerio	68.06	9.00e-78	282.00
IUUC-Dno-029803	Dasypus novemcinctus	83.66	1.00e-93	334.00
IUUC-Dor-030619	Dipodomys ordii	85.00	8.00e-63	232.00
IUUC-Ete-032777	Echinops telfairi	83.96	9.00e-93	332.00
IUUC-Eca-034395	Equus caballus	84.65	1.00e-94	338.00
IUUC-Eeu-035075	Erinaceus europaeus	63.86	8.00e-63	232.00
IUUC-Fca-035819	Felis catus	84.65	2.00e-94	338.00
IUUC-Fal-037330	Ficedula albicollis	83.66	1.00e-89	321.00
IUUC-Gmo-038979	Gadus morhua	78.29	5.00e-74	270.00
IUUC-Gga-040456	Gallus gallus	83.74	3.00e-90	323.00
IUUC-Gac-041797	Gasterosteus aculeatus	75.62	1.00e-80	291.00
IUUC-Ggo-045586	Gorilla gorilla	85.15	6.00e-95	339.00
IUUC-Hsa-047008	Homo sapiens	85.15	7.00e-95	339.00
IUUC-Itr-048432	Ictidomys tridecemlineatus	84.16	3.00e-94	337.00
IUUC-Lch-049682	Latimeria chalumnae	76.62	5.00e-82	296.00
IUUC-Loc-051775	Lepisosteus oculatus	80.68	2.00e-75	274.00
IUUC-Laf-054283	Loxodonta africana	83.82	1.00e-92	331.00
IUUC-Mcc-055073	Macaca mulatta	85.42	6.00e-97	345.00
IUUC-Meu-056650	Macropus eugenii	82.67	1.00e-91	328.00
IUUC-Mga-059703	Meleagris gallopavo	84.16	2.00e-90	324.00
IUUC-Mdo-062114	Monodelphis domestica	84.65	7.00e-95	339.00
IUUC-Mmu-064230	Mus musculus	84.16	5.00e-94	336.00
IUUC-Mpu-065845	Mustela putorius furo	84.16	1.00e-93	334.00
IUUC-Mlu-067564	Myotis lucifugus	83.17	1.00e-90	325.00
IUUC-Nfi-068472	Neosartorya fischeri	34.38	3.00e-01	28.50
IUUC-Nle-069516	Nomascus leucogenys	85.15	5.00e-95	339.00
IUUC-Opr-070945	Ochotona princeps	71.14	6.00e-73	266.00
IUUC-Ont-071439	Oreochromis niloticus	79.55	2.00e-75	274.00
IUUC-Oan-073122	Ornithorhynchus anatinus	83.22	8.00e-62	228.00
IUUC-Ocu-074128	Oryctolagus cuniculus	77.69	3.00e-50	189.00
IUUC-Ola-086972	Oryzias latipes	66.03	1.00e-68	251.00
IUUC-Oga-088786	Otolemur garnettii	84.65	1.00e-101	361.00
IUUC-Oar-089212	Ovis aries	83.74	3.00e-92	330.00
IUUC-Ptr-090936	Pan troglodytes	85.15	7.00e-95	339.00
IUUC-Pan-092234	Papio anubis	85.15	7.00e-95	339.00
IUUC-Psi-093448	Pelodiscus sinensis	83.50	1.00e-92	332.00
IUUC-Pfo-096711	Poecilia formosa	80.68	5.00e-76	276.00
IUUC-Pab-097628	Pongo abelii	84.58	2.00e-94	337.00
IUUC-Pca-100555	Procavia capensis	84.42	2.00e-73	267.00
IUUC-Ppe-102087	Prunus persica	37.43	2.00e-27	114.00
IUUC-Pva-102259	Pteropus vampyrus	85.15	5.00e-95	339.00
IUUC-Rno-105045	Rattus norvegicus	85.15	7.00e-95	339.00
IUUC-Sha-107606	Sarcophilus harrisii	84.16	5.00e-94	336.00
IUUC-Ssc-115663	Sus scrofa	85.15	1.00e-94	338.00
IUUC-Tgu-117374	Taeniopygia guttata	85.15	2.00e-93	334.00
IUUC-Tru-118030	Takifugu rubripes	79.55	3.00e-75	274.00
IUUC-Tsy-119298	Tarsius syrichta	85.64	3.00e-95	340.00
IUUC-Tni-119797	Tetraodon nigroviridis	77.84	1.00e-74	271.00
IUUC-Tca-121220	Theobroma cacao	36.93	4.00e-26	111.00
IUUC-Tbe-127896	Tupaia belangeri	84.65	2.00e-94	337.00
IUUC-Ttr-128523	Tursiops truncatus	84.16	5.00e-93	332.00
IUUC-Vpa-130184	Vicugna pacos	81.19	1.00e-95	341.00
IUUC-Vvi-131246	Vitis vinifera	37.29	8.00e-27	112.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence