iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007114

UUCD1 version

UUC-ArT-00426

Ensembl Protein ID

AT2G02350.2

UniProt Accession

Q9FV02; F4IQC4; Q9ZVQ7; SKIP3_ARATH

Genbank Protein ID

AAC78517.2; AEC05568.1; ANM61389.1; AAG21978.1

Protein Name

F-box protein SKIP3; F-box protein PP2-B9; Protein PHLOEM PROTEIN 2-LIKE B9; SKP1-interacting partner 3

Genbank Nucleotide ID

AC005312; CP002685; CP002685; AF263379

Gene Name

SKIP3; PP2B9; At2g02350; T16F16.14

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT2G02350	AT2G02350.2	AT2G02350.2

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	33.85	6.00e-03	39.30	IUUC-Hsa-046558

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MIRLRTLIEK NRSESRKKIV SSTLDSLPEG CISNIISFTS PEDACVAAAV SKIFESAVKS 60
DIVWEKFLPT DYESLITPSR VFSSKKELYF SLCNDPLLIE DGKMSLWLEK ASGKRCIMLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGGGGCATC GACGGAGACG ATGATACGGC TACGGACACT GATTGAGAAA AATCGAAGCG 60
AAAGCAGAAA AAAGATCGTC TCTTCTACTC TCGATTCGTT GCCTGAGGGA TGCATTTCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR001810--F-box_dom
IPR025886--PP2-like

PROSITE

PS50181--FBOX

Pfam

PF00646--F-box
PF14299--PP2

SMART

SM00256--FBOX

Gene Ontology

GO:0016567--P:protein ubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001232	Ailuropoda melanoleuca	37.04	4.00e-04	38.50
IUUC-Aca-005076	Anolis carolinensis	31.37	9.10e-02	30.80
IUUC-Aly-005608	Arabidopsis lyrata	52.73	2.00e-68	251.00
IUUC-Afu-008801	Aspergillus fumigatus	33.33	1.40e+00	28.10
IUUC-Bta-012449	Bos taurus	35.29	3.00e-03	35.40
IUUC-Cja-019890	Callithrix jacchus	33.85	3.00e-04	39.30
IUUC-Cfa-021134	Canis familiaris	35.29	1.00e-02	33.90
IUUC-Csa-023540	Chlorocebus sabaeus	33.85	3.00e-04	38.90
IUUC-Dno-028997	Dasypus novemcinctus	35.19	1.00e-03	37.00
IUUC-Dor-030135	Dipodomys ordii	35.42	3.30e-02	32.00
IUUC-Ete-033149	Echinops telfairi	37.04	1.00e-04	40.40
IUUC-Eca-033292	Equus caballus	37.50	6.00e-03	34.30
IUUC-Eeu-034504	Erinaceus europaeus	35.00	1.30e-02	33.10
IUUC-Fca-036476	Felis catus	37.04	5.00e-04	38.10
IUUC-Fal-036711	Ficedula albicollis	33.33	4.00e-03	34.70
IUUC-Gac-041791	Gasterosteus aculeatus	26.04	6.00e-03	34.70
IUUC-Ggo-044736	Gorilla gorilla	33.85	4.00e-04	38.50
IUUC-Hsa-046558	Homo sapiens	33.85	3.00e-04	39.30
IUUC-Itr-048956	Ictidomys tridecemlineatus	32.86	4.00e-04	38.50
IUUC-Lch-049817	Latimeria chalumnae	40.00	6.00e-03	34.30
IUUC-Lpe-051563	Leersia perrieri	36.21	8.00e-31	129.00
IUUC-Loc-052226	Lepisosteus oculatus	30.14	3.00e-05	42.40
IUUC-Laf-054371	Loxodonta africana	34.62	3.00e-03	35.80
IUUC-Mcc-054904	Macaca mulatta	33.85	3.00e-04	38.90
IUUC-Mmr-061692	Microcebus murinus	34.55	8.00e-04	37.40
IUUC-Mmu-064223	Mus musculus	31.25	5.00e-03	34.70
IUUC-Mpu-066290	Mustela putorius furo	37.04	6.00e-04	38.10
IUUC-Mlu-067882	Myotis lucifugus	36.54	2.00e-03	36.20
IUUC-Nle-070162	Nomascus leucogenys	33.85	3.00e-04	39.30
IUUC-Opr-070789	Ochotona princeps	33.33	3.00e-03	35.40
IUUC-Ont-071690	Oreochromis niloticus	25.48	1.00e-04	40.00
IUUC-Oan-072928	Ornithorhynchus anatinus	32.50	1.10e-02	33.10
IUUC-Ocu-073857	Oryctolagus cuniculus	34.00	8.00e-03	34.30
IUUC-Ola-086607	Oryzias latipes	37.25	2.00e-04	39.70
IUUC-Oga-088929	Otolemur garnettii	35.85	1.00e-03	37.00
IUUC-Oar-089305	Ovis aries	37.50	6.00e-03	34.30
IUUC-Ptr-090813	Pan troglodytes	33.85	2.00e-04	39.30
IUUC-Pan-092924	Papio anubis	33.85	2.00e-04	39.30
IUUC-Psi-093237	Pelodiscus sinensis	31.37	1.30e-02	33.50
IUUC-Ppa-095362	Physcomitrella patens	27.94	9.00e-20	90.10
IUUC-Pab-098292	Pongo abelii	33.85	3.00e-04	38.90
IUUC-Pva-102221	Pteropus vampyrus	36.92	3.00e-04	38.90
IUUC-Ptt-103902	Puccinia triticina	30.61	1.20e+00	28.50
IUUC-Rno-105910	Rattus norvegicus	33.33	3.00e-03	35.80
IUUC-Ssc-115507	Sus scrofa	33.96	5.00e-03	34.70
IUUC-Tgu-116502	Taeniopygia guttata	36.59	5.00e-03	34.70
IUUC-Tru-118203	Takifugu rubripes	35.56	3.00e-03	35.40
IUUC-Tni-120249	Tetraodon nigroviridis	37.78	2.00e-03	36.20
IUUC-Tur-126361	Triticum urartu	30.69	1.00e-33	135.00
IUUC-Ttr-128299	Tursiops truncatus	37.50	1.00e-02	33.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence