iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114760

UUCD1 version

UUC-SoB-01098

Ensembl Protein ID

Sb07g003290.1

UniProt Accession

A0A1B6PFF0; A0A1B6PFF0_SORBI

Genbank Protein ID

KXG24414.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000766

Gene Name

SORBI_007G038700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb07g003290	Sb07g003290.1	Sb07g003290.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.00e-07	30.9	12	62

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf....kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C iC+ed+    ++++++lp CgHvfha Cl++w  +    +k+ +CP+C+
   Q: 12   CTICYEDLrplsDQHLHCLPaCGHVFHALCLEQWLEYCPGGKKKRTCPICK 62
           ********888855599999**************555557889999****6 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MTVAAAAAWP VCTICYEDLR PLSDQHLHCL PACGHVFHAL CLEQWLEYCP GGKKKRTCPI 60
CKQACGAAHP PTRLYFSSTG TCPTQACPSS PGNASGGADP AALAAEVARL EHKAASLGKV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACCGTCG CCGCCGCCGC CGCATGGCCG GTCTGCACCA TCTGCTACGA GGATCTCCGC 60
CCGCTCTCCG ACCAGCACCT CCACTGCCTC CCCGCCTGCG GCCACGTCTT CCACGCCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001411	Ailuropoda melanoleuca	36.23	3.00e-07	48.90
IUUC-Atr-002646	Amborella trichopoda	47.45	3.00e-51	195.00
IUUC-Aca-004476	Anolis carolinensis	40.00	3.00e-09	55.80
IUUC-Aly-005550	Arabidopsis lyrata	44.06	5.00e-51	194.00
IUUC-Ath-007362	Arabidopsis thaliana	39.19	2.00e-47	182.00
IUUC-Bta-013084	Bos taurus	37.68	1.00e-07	50.40
IUUC-Bdi-014334	Brachypodium distachyon	60.98	1.00e-163	569.00
IUUC-Bol-015839	Brassica oleracea	46.39	6.00e-52	197.00
IUUC-Bra-016703	Brassica rapa	45.70	3.00e-50	192.00
IUUC-Cja-019856	Callithrix jacchus	36.23	3.00e-07	48.90
IUUC-Cfa-020075	Canis familiaris	36.23	3.00e-07	48.90
IUUC-Cpo-022481	Cavia porcellus	36.23	2.00e-07	49.30
IUUC-Csa-023793	Chlorocebus sabaeus	36.23	2.00e-07	49.30
IUUC-Dno-029478	Dasypus novemcinctus	36.23	2.00e-07	49.30
IUUC-Ete-033012	Echinops telfairi	36.23	2.00e-07	49.30
IUUC-Eca-034084	Equus caballus	36.23	4.00e-07	48.90
IUUC-Fca-035772	Felis catus	36.23	3.00e-07	48.90
IUUC-Fal-037098	Ficedula albicollis	29.66	2.00e-08	52.80
IUUC-Gac-042636	Gasterosteus aculeatus	27.81	2.00e-09	56.20
IUUC-Gma-042775	Glycine max	36.48	4.00e-59	221.00
IUUC-Ggo-045184	Gorilla gorilla	36.23	3.00e-07	49.30
IUUC-Hsa-046651	Homo sapiens	36.23	3.00e-07	48.90
IUUC-Hvu-047625	Hordeum vulgare	62.21	4.00e-177	613.00
IUUC-Itr-048550	Ictidomys tridecemlineatus	36.23	2.00e-07	49.70
IUUC-Lch-049575	Latimeria chalumnae	35.29	2.00e-07	49.70
IUUC-Lpe-051238	Leersia perrieri	66.67	0.00e+00	648.00
IUUC-Loc-051999	Lepisosteus oculatus	28.35	5.00e-09	55.10
IUUC-Laf-053347	Loxodonta africana	36.23	3.00e-07	48.90
IUUC-Mtr-058033	Medicago truncatula	34.98	3.00e-69	255.00
IUUC-Mmr-061219	Microcebus murinus	36.23	3.00e-07	48.90
IUUC-Mdo-062103	Monodelphis domestica	33.33	6.00e-07	48.10
IUUC-Mmu-064005	Mus musculus	36.23	2.00e-07	49.30
IUUC-Mac-064444	Musa acuminata	53.14	4.00e-68	251.00
IUUC-Mpu-066570	Mustela putorius furo	36.23	4.00e-07	48.50
IUUC-Mlu-067806	Myotis lucifugus	34.78	8.00e-07	47.80
IUUC-Nle-069123	Nomascus leucogenys	36.23	3.00e-07	49.30
IUUC-Ont-071973	Oreochromis niloticus	27.74	6.00e-11	61.20
IUUC-Ocu-074582	Oryctolagus cuniculus	36.23	4.00e-07	48.50
IUUC-Oba-075193	Oryza barthii	65.08	0.00e+00	633.00
IUUC-Ogl-077006	Oryza glaberrima	65.20	0.00e+00	647.00
IUUC-Ogu-078240	Oryza glumaepatula	62.56	0.00e+00	636.00
IUUC-Oin-079866	Oryza indica	64.25	0.00e+00	642.00
IUUC-Olo-081029	Oryza longistaminata	63.24	3.00e-166	577.00
IUUC-Ome-081703	Oryza meridionalis	65.08	0.00e+00	636.00
IUUC-Oni-082490	Oryza nivara	62.72	0.00e+00	637.00
IUUC-Opu-083315	Oryza punctata	65.42	0.00e+00	636.00
IUUC-Oru-084228	Oryza rufipogon	64.74	0.00e+00	653.00
IUUC-Osa-085981	Oryza sativa	64.86	0.00e+00	668.00
IUUC-Oga-088807	Otolemur garnettii	36.23	2.00e-07	49.70
IUUC-Ptr-090768	Pan troglodytes	36.23	3.00e-07	48.90
IUUC-Pan-091880	Papio anubis	36.23	3.00e-07	48.90
IUUC-Psi-093782	Pelodiscus sinensis	36.76	2.00e-07	49.70
IUUC-Ppa-095896	Physcomitrella patens	42.95	5.00e-44	171.00
IUUC-Pfo-096068	Poecilia formosa	24.25	3.00e-09	55.50
IUUC-Pop-099603	Populus trichocarpa	47.26	4.00e-54	204.00
IUUC-Pca-100327	Procavia capensis	36.23	1.00e-07	50.10
IUUC-Ppe-101994	Prunus persica	32.96	5.00e-45	174.00
IUUC-Pva-102924	Pteropus vampyrus	34.78	1.00e-06	47.40
IUUC-Rno-105799	Rattus norvegicus	36.23	2.00e-07	49.70
IUUC-Sit-109687	Setaria italica	76.60	0.00e+00	770.00
IUUC-Sly-111145	Solanum lycopersicum	48.16	4.00e-61	228.00
IUUC-Stu-112328	Solanum tuberosum	46.32	1.00e-60	227.00
IUUC-Sar-113187	Sorex araneus	34.78	3.00e-06	45.80
IUUC-Ssc-115838	Sus scrofa	36.23	8.00e-08	50.10
IUUC-Tgu-116674	Taeniopygia guttata	37.93	2.00e-07	49.70
IUUC-Tru-117753	Takifugu rubripes	29.27	3.00e-09	55.80
IUUC-Tsy-119416	Tarsius syrichta	36.23	5.00e-07	48.10
IUUC-Tni-120767	Tetraodon nigroviridis	30.08	8.00e-10	57.40
IUUC-Tca-121056	Theobroma cacao	35.71	1.00e-59	223.00
IUUC-Tur-126115	Triticum urartu	62.37	9.00e-180	623.00
IUUC-Ttr-128687	Tursiops truncatus	36.23	9.00e-08	50.80
IUUC-Vvi-130955	Vitis vinifera	47.80	6.00e-57	214.00
IUUC-Xma-133304	Xiphophorus maculatus	25.90	6.00e-11	61.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence