iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-050329

Ensembl Protein ID

ENSLACP00000010112.1

UniProt Accession

H3AKE1; H3AKE1_LATCH

Genbank Protein ID

ENSLACP00000010112

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01143504

Gene Name

WDR88

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000008914.1	ENSLACT00000010189.1	ENSLACP00000010112.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-35	120.4	229	259
UBD/Beta-Prp	3.10e-48	164.7	94	310

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH++sv+++af  d  llvsG++D+++ +WD
   Q: 229  GHQGSVSSCAFsKDaSLLVSGAYDKSVCLWD 259
           8**********98889*************** PP

UBD/Beta-Prp

   S: 49   sgheaevtavkfspdgkilvtgseD..rtikvwdlstgkcvhtlk.ghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetls 134
           s+he++v ++++s++g  +vt  +D  +t+++ d ++g+ v  +k  he++ + + f+p +++++s s+drti++wd+  +    ++++
   Q: 94   SNHEGPVISCNISSHG-KYVTLCSDiqNTLYIIDGENGTNVAQVKdHHESTMMRCCFDPGNQRVASVSSDRTIKLWDMIAKRTTVTIKN 181
           5678888888888887.577777777777777788888888777755666777777888778888888888888888777666666888 PP
   S: 135  ghdgvvncvvvhpdgnllvsGslDrtvrlWdl......ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgec.vr 216
           gh+ v++  +++ +g  l ++s D+t+++Wd+      + g +   lt gh++sv s +f+++   lvsg++d++v lwd   g c   
   Q: 182  GHSNVISDCCFSLNGHFLCTASWDTTLKIWDImagefrSHGAVN--LTMGHQGSVSSCAFSKDASLLVSGAYDKSVCLWDTA-GACkKL 267
           88888888888887777888888888888888555432222222..244588888888888888888888888888888874.334256 PP
   S: 217  tlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllkt 259
           +l+gh+d+v +v++s ++++++s+s+D + r+W++++ +++ +
   Q: 268  ALKGHEDWVMDVALSADNKWILSCSKDCTSRLWNIENHEYIPA 310
           7788888888888888888888888888888888877776554 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

ILQIPIKVLR GHSDIITSCS FCFEDTRVIT SSYDKTVRLQ DINTGEVMHI FEGEHTAPIS 60
DCVLSQDHKR LITASWDKTV KAWDTETGKV LWTSNHEGPV ISCNISSHGK YVTLCSDIQN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTCTGCAGA TTCCCATTAA AGTTTTAAGA GGGCATTCAG ATATTATCAC TTCTTGTTCC 60
TTTTGCTTTG AAGACACAAG AGTAATAACA AGTTCTTATG ACAAGACAGT ACGGCTCCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR018391--PQQ_beta_propeller_repeat
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00564--PQQ
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001328	Ailuropoda melanoleuca	52.08	5.00e-96	343.00
IUUC-Apl-003571	Anas platyrhynchos	59.26	3.00e-124	437.00
IUUC-Aca-005232	Anolis carolinensis	54.55	1.00e-84	305.00
IUUC-Ame-011833	Astyanax mexicanus	54.92	1.00e-60	225.00
IUUC-Bta-013562	Bos taurus	51.28	4.00e-110	391.00
IUUC-Cja-019202	Callithrix jacchus	49.86	5.00e-103	367.00
IUUC-Cfa-021095	Canis familiaris	50.71	2.00e-106	379.00
IUUC-Cpo-022170	Cavia porcellus	50.00	1.00e-105	376.00
IUUC-Csa-024218	Chlorocebus sabaeus	50.43	1.00e-106	379.00
IUUC-Cho-024561	Choloepus hoffmanni	51.91	8.00e-82	296.00
IUUC-Dno-029722	Dasypus novemcinctus	49.57	4.00e-98	351.00
IUUC-Dor-030464	Dipodomys ordii	45.62	4.00e-85	307.00
IUUC-Ete-032931	Echinops telfairi	42.07	2.00e-69	255.00
IUUC-Eca-034428	Equus caballus	50.71	3.00e-109	388.00
IUUC-Eeu-034568	Erinaceus europaeus	43.71	1.00e-77	283.00
IUUC-Fca-035707	Felis catus	47.01	6.00e-95	341.00
IUUC-Gmo-039646	Gadus morhua	51.94	2.00e-88	318.00
IUUC-Gga-040710	Gallus gallus	59.77	1.00e-124	439.00
IUUC-Ggo-044611	Gorilla gorilla	46.05	1.00e-59	223.00
IUUC-Hsa-046138	Homo sapiens	50.43	6.00e-106	377.00
IUUC-Itr-048283	Ictidomys tridecemlineatus	47.97	1.00e-99	356.00
IUUC-Loc-052876	Lepisosteus oculatus	51.85	1.00e-41	162.00
IUUC-Laf-053777	Loxodonta africana	52.42	2.00e-108	385.00
IUUC-Mcc-055771	Macaca mulatta	50.71	8.00e-107	380.00
IUUC-Meu-056584	Macropus eugenii	45.85	2.00e-80	291.00
IUUC-Mga-059818	Meleagris gallopavo	59.49	7.00e-126	443.00
IUUC-Mmr-060639	Microcebus murinus	48.54	1.00e-102	365.00
IUUC-Mdo-062321	Monodelphis domestica	53.99	5.00e-119	421.00
IUUC-Mpu-066849	Mustela putorius furo	50.71	4.00e-108	384.00
IUUC-Mlu-067238	Myotis lucifugus	44.73	1.00e-91	330.00
IUUC-Ont-071230	Oreochromis niloticus	48.44	1.00e-91	329.00
IUUC-Oan-072698	Ornithorhynchus anatinus	58.24	1.00e-127	449.00
IUUC-Ocu-074219	Oryctolagus cuniculus	52.65	4.00e-102	364.00
IUUC-Oga-087913	Otolemur garnettii	49.57	1.00e-105	376.00
IUUC-Oar-089977	Ovis aries	51.85	4.00e-111	394.00
IUUC-Ptr-090876	Pan troglodytes	50.43	9.00e-107	380.00
IUUC-Pan-091936	Papio anubis	55.02	7.00e-75	273.00
IUUC-Psi-093015	Pelodiscus sinensis	59.44	9.00e-83	299.00
IUUC-Pma-094552	Petromyzon marinus	38.42	2.00e-36	144.00
IUUC-Pfo-096240	Poecilia formosa	48.58	9.00e-97	348.00
IUUC-Pab-097983	Pongo abelii	45.58	3.00e-90	325.00
IUUC-Pca-100752	Procavia capensis	47.59	2.00e-83	302.00
IUUC-Pva-102199	Pteropus vampyrus	45.87	1.00e-94	339.00
IUUC-Rno-106062	Rattus norvegicus	49.43	2.00e-105	375.00
IUUC-Ssc-116089	Sus scrofa	48.72	5.00e-99	354.00
IUUC-Tbe-127860	Tupaia belangeri	44.16	5.00e-91	327.00
IUUC-Ttr-129152	Tursiops truncatus	47.66	1.00e-98	353.00
IUUC-Vpa-130745	Vicugna pacos	48.00	2.00e-97	348.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence