iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Mga-059818

UUCD1 version

UUC-MeG-00283

Ensembl Protein ID

ENSMGAP00000005793.1

UniProt Accession

G1N2E0; G1N2E0_MELGA

Protein Name

Uncharacterized protein

Gene Name

WDR88

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMGAG00000005840.1	ENSMGAT00000006536.1	ENSMGAP00000005793.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-46	153.5	38	75
UBD/Beta-Prp	4.70e-64	216.1	160	337

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvll 36
           gH+d v++++f   d  ++s+s+D t+k+WD+ +g ++
   Q: 38   GHSDTVSSCHFccEDSKILSCSYDRTVKLWDVAKGFPV 75
           8**********964489**************9888665 PP

UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseDrtikvwdlstgkc.... 86
           ++++ghh s it  +f pd++ +++ s+d+tik+wd+   ++  ++ +gh++++++++f +dg +l t+s Dr +k+wd++tg+     
   Q: 160  ACVQGHHRSTITRCCFDPDNQRVTSVSYDKTIKLWDMVARSTSITIkEGHSNAISDCCFTSDGRYLCTASWDRSLKIWDVKTGEFrshg 248
           689***************************************99998**********************************77751111 PP
   S: 87   .vhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrt 174
            v   +ghe sv s+ fs++ + +vsG+ d+ i +w+++ g++    l+gh ++v+ v++++d++ + s+s+D+t+rlW++++++++  
   Q: 249  pVTLNQGHEGSVSSCCFSQDASLVVSGGYDNAITIWETDAGYKKL-SLKGHWDWVTDVAISEDKKWILSASKDSTLRLWNIERMDCIPS 336
           144455***************************************.****************************************987 PP
   S: 175  l 175
            
   Q: 337  V 337
           7 PP

Organism

Meleagris gallopavo

Protein Sequence
(Fasta)

DPLAIEPLPE LQPEMSLAEG RWGDQEQMAE IQFKILRGHS DTVSSCHFCC EDSKILSCSY 60
DRTVKLWDVA KGFPVQIFEE HTAPVSECNL SPDDRRVVTS SYDNTVKTWD METGKVLWTV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATCCCTTGG CCATAGAGCC ACTGCCTGAG CTCCAGCCTG AGATGTCCCT TGCTGAGGGG 60
CGCTGGGGGG ACCAGGAGCA AATGGCAGAG GTGGGCTGGG AAGGGGGAAG CGGGGGCTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001328	Ailuropoda melanoleuca	56.87	3.00e-105	374.00
IUUC-Apl-003571	Anas platyrhynchos	88.30	0.00e+00	649.00
IUUC-Aca-005232	Anolis carolinensis	56.13	6.00e-88	316.00
IUUC-Ame-011833	Astyanax mexicanus	53.65	3.00e-59	220.00
IUUC-Bta-013562	Bos taurus	55.56	8.00e-119	420.00
IUUC-Cja-019202	Callithrix jacchus	54.40	2.00e-119	422.00
IUUC-Cfa-021095	Canis familiaris	56.27	3.00e-120	424.00
IUUC-Cpo-022170	Cavia porcellus	53.81	4.00e-120	424.00
IUUC-Csa-024218	Chlorocebus sabaeus	54.92	2.00e-123	435.00
IUUC-Cho-024561	Choloepus hoffmanni	56.11	5.00e-85	306.00
IUUC-Dno-029722	Dasypus novemcinctus	53.26	1.00e-104	372.00
IUUC-Dor-030464	Dipodomys ordii	53.73	1.00e-95	342.00
IUUC-Ete-032931	Echinops telfairi	45.05	1.00e-74	272.00
IUUC-Eca-034428	Equus caballus	55.81	6.00e-116	409.00
IUUC-Eeu-034568	Erinaceus europaeus	46.71	3.00e-84	304.00
IUUC-Fca-035707	Felis catus	51.97	2.00e-111	395.00
IUUC-Fox-037826	Fusarium oxysporum	37.45	2.00e-44	174.00
IUUC-Gmo-039646	Gadus morhua	50.32	4.00e-84	303.00
IUUC-Gga-040710	Gallus gallus	93.06	0.00e+00	662.00
IUUC-Ggo-044611	Gorilla gorilla	51.74	3.00e-65	241.00
IUUC-Hsa-046138	Homo sapiens	54.66	2.00e-121	428.00
IUUC-Itr-048283	Ictidomys tridecemlineatus	47.78	2.00e-110	391.00
IUUC-Lch-050329	Latimeria chalumnae	59.49	5.00e-126	443.00
IUUC-Loc-052876	Lepisosteus oculatus	45.45	8.00e-41	159.00
IUUC-Laf-053777	Loxodonta africana	55.06	6.00e-122	430.00
IUUC-Mcc-055771	Macaca mulatta	54.92	2.00e-122	432.00
IUUC-Meu-056584	Macropus eugenii	44.76	9.00e-75	273.00
IUUC-Mmr-060639	Microcebus murinus	55.10	2.00e-111	395.00
IUUC-Mdo-062321	Monodelphis domestica	55.35	1.00e-121	429.00
IUUC-Mpu-066849	Mustela putorius furo	56.51	4.00e-124	437.00
IUUC-Mlu-067238	Myotis lucifugus	51.44	1.00e-111	395.00
IUUC-Nle-070150	Nomascus leucogenys	30.71	1.00e-34	139.00
IUUC-Ont-071230	Oreochromis niloticus	44.90	2.00e-87	315.00
IUUC-Oan-072698	Ornithorhynchus anatinus	59.53	2.00e-131	461.00
IUUC-Ocu-074219	Oryctolagus cuniculus	54.78	5.00e-114	403.00
IUUC-Oga-087913	Otolemur garnettii	51.82	4.00e-118	417.00
IUUC-Oar-089977	Ovis aries	55.68	9.00e-122	429.00
IUUC-Ptr-090876	Pan troglodytes	55.18	4.00e-123	434.00
IUUC-Pan-091936	Papio anubis	58.87	1.00e-79	288.00
IUUC-Psi-093015	Pelodiscus sinensis	68.15	3.00e-95	340.00
IUUC-Pma-094552	Petromyzon marinus	33.90	2.00e-31	127.00
IUUC-Pfo-096240	Poecilia formosa	45.89	5.00e-83	302.00
IUUC-Pab-097983	Pongo abelii	50.00	2.00e-104	372.00
IUUC-Pca-100752	Procavia capensis	45.45	2.00e-89	322.00
IUUC-Pva-102199	Pteropus vampyrus	50.69	1.00e-107	382.00
IUUC-Rno-106062	Rattus norvegicus	52.36	3.00e-118	417.00
IUUC-Ssc-116089	Sus scrofa	52.44	1.00e-114	405.00
IUUC-Tbe-127860	Tupaia belangeri	47.40	2.00e-101	362.00
IUUC-Ttr-129152	Tursiops truncatus	51.57	3.00e-110	391.00
IUUC-Vpa-130745	Vicugna pacos	54.26	8.00e-108	383.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence