iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ncr-068685

Ensembl Protein ID

EAA29819

UniProt Accession

Q7S306; Q7S306_NEUCR

Genbank Protein ID

EAA29819.2

Protein Name

Rad23-like protein

Genbank Nucleotide ID

CM002238

Gene Name

rad23; NCU07542

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
NCU07542	EAA29819	EAA29819

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	2.50e-15	55.1	151	189
ULD/UDP/UBQ/UBQ_PIM	1.20e-24	85.1	1	75

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLldg 41
           + ++++++++MGF+r+++  a+raa+ n+e+AveyLl+g
   Q: 151  RAEAIANMEAMGFERSQIDAAMRAAFFNPERAVEYLLNG 189
           6789*********************************86 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           mk+t+k lk+++f+le+++ +t++++K+ki++e+g  pe qkLIy+GkiLkD++t+++++i+++ +v++vv+k+k
   Q: 1    MKVTFKDLKQQKFTLEIEPTETISKVKQKISEERGWAPELQKLIYSGKILKDEETVESYKIEEKGFVVCVVNKPK 75
           99**********************************************************************987 PP

Organism

Neurospora crassa

Protein Sequence
(Fasta)

MKVTFKDLKQ QKFTLEIEPT ETISKVKQKI SEERGWAPEL QKLIYSGKIL KDEETVESYK 60
IEEKGFVVCV VNKPKTTAPK PAESSSSAAA PATPAAAAPA STPAPPAAPA ASSAAAAAPS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGGCTACCC GCCTGCTGTG CCCCTCTTCC ATTCAGTGCA CTCAGGTGAA GCGAACAAAC 60
CCCAAATTCT CCGCCTCAAA GCTGCCTCAT CAGTCATCAC AAGCCGCTGT AAAACGTTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005829--C:cytosol
GO:0005635--C:nuclear envelope
GO:0000111--C:nucleotide-excision repair factor 2 complex
GO:0000502--C:proteasome complex
GO:0003684--F:damaged DNA binding
GO:0000224--F:peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity
GO:0042177--P:negative regulation of protein catabolic process
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0006289--P:nucleotide-excision repair
GO:0006517--P:protein deglycosylation
GO:0016567--P:protein ubiquitination
GO:0030433--P:ubiquitin-dependent ERAD pathway

KEGG

ncr:NCU07542

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000770	Aegilops tauschii	48.87	3.00e-25	107.00
IUUC-Aml-001195	Ailuropoda melanoleuca	41.07	4.00e-15	73.90
IUUC-Atr-002756	Amborella trichopoda	37.60	5.00e-29	120.00
IUUC-Apl-003371	Anas platyrhynchos	44.12	5.00e-16	77.00
IUUC-Aca-004599	Anolis carolinensis	48.65	2.00e-14	71.60
IUUC-Aly-006159	Arabidopsis lyrata	44.19	4.00e-06	43.90
IUUC-Ath-006688	Arabidopsis thaliana	43.65	7.00e-25	106.00
IUUC-Ago-007830	Ashbya gossypii	30.67	7.00e-09	53.10
IUUC-Acl-008212	Aspergillus clavatus	53.82	6.00e-44	169.00
IUUC-Afl-008605	Aspergillus flavus	55.92	3.00e-44	171.00
IUUC-Afu-008877	Aspergillus fumigatus	57.85	3.00e-47	180.00
IUUC-Ani-009460	Aspergillus nidulans	57.50	2.00e-45	174.00
IUUC-Aor-010032	Aspergillus oryzae	56.33	3.00e-44	170.00
IUUC-Ate-010458	Aspergillus terreus	54.88	4.00e-47	180.00
IUUC-Ame-011704	Astyanax mexicanus	45.04	3.00e-23	99.40
IUUC-Bgr-012056	Blumeria graminis	62.67	7.00e-26	109.00
IUUC-Bta-012922	Bos taurus	41.07	3.00e-15	74.30
IUUC-Bci-013933	Botrytis cinerea	58.06	6.00e-47	179.00
IUUC-Bdi-014253	Brachypodium distachyon	39.27	1.00e-28	119.00
IUUC-Bol-016493	Brassica oleracea	38.24	5.00e-29	119.00
IUUC-Bra-016769	Brassica rapa	38.24	1.00e-28	119.00
IUUC-Cel-018364	Caenorhabditis elegans	44.30	2.00e-13	68.20
IUUC-Cja-018772	Callithrix jacchus	46.25	2.00e-15	74.70
IUUC-Cfa-020683	Canis familiaris	41.07	3.00e-15	74.30
IUUC-Cpo-022145	Cavia porcellus	47.62	9.00e-18	82.80
IUUC-Cre-022810	Chlamydomonas reinhardtii	37.19	4.00e-15	73.60
IUUC-Csa-023714	Chlorocebus sabaeus	50.00	1.00e-16	79.00
IUUC-Cho-024814	Choloepus hoffmanni	41.07	2.00e-15	74.70
IUUC-Cin-025741	Ciona intestinalis	34.19	1.00e-14	72.00
IUUC-Csv-025823	Ciona savignyi	45.95	2.00e-12	64.30
IUUC-Cgl-026495	Colletotrichum gloeosporioides	80.56	6.00e-31	126.00
IUUC-Cne-027056	Cryptococcus neoformans	46.67	7.00e-16	76.30
IUUC-Cme-027260	Cyanidioschyzon merolae	23.46	5.00e-05	40.40
IUUC-Dre-027581	Danio rerio	50.88	1.00e-18	85.90
IUUC-Dno-029543	Dasypus novemcinctus	41.07	3.00e-15	74.70
IUUC-Dor-030358	Dipodomys ordii	45.67	1.00e-16	79.00
IUUC-Dse-031336	Dothistroma septosporum	66.67	1.00e-28	118.00
IUUC-Dme-032027	Drosophila melanogaster	52.08	1.00e-10	59.30
IUUC-Ete-032583	Echinops telfairi	41.07	3.00e-15	74.70
IUUC-Eca-034243	Equus caballus	41.07	3.00e-15	73.90
IUUC-Eeu-034721	Erinaceus europaeus	43.86	8.00e-10	56.20
IUUC-Fca-035679	Felis catus	41.07	3.00e-15	74.30
IUUC-Fal-037148	Ficedula albicollis	40.35	6.00e-16	76.60
IUUC-Fox-037960	Fusarium oxysporum	64.03	8.00e-57	212.00
IUUC-Fso-038107	Fusarium solani	61.51	1.00e-52	198.00
IUUC-Gmo-039080	Gadus morhua	47.54	2.00e-16	77.80
IUUC-Ggr-040116	Gaeumannomyces graminis	74.02	1.00e-34	138.00
IUUC-Gga-040544	Gallus gallus	44.12	6.00e-16	76.60
IUUC-Gac-042239	Gasterosteus aculeatus	34.87	5.00e-24	103.00
IUUC-Gma-044245	Glycine max	33.60	3.00e-28	117.00
IUUC-Ggo-045125	Gorilla gorilla	50.00	1.00e-16	79.30
IUUC-Hsa-046519	Homo sapiens	50.00	1.00e-16	79.30
IUUC-Hvu-047832	Hordeum vulgare	39.27	8.00e-29	119.00
IUUC-Itr-048295	Ictidomys tridecemlineatus	50.00	2.00e-16	78.20
IUUC-Kpa-049314	Komagataella pastoris	35.83	1.00e-30	125.00
IUUC-Lch-050553	Latimeria chalumnae	60.00	3.00e-12	64.30
IUUC-Lpe-051087	Leersia perrieri	38.46	5.00e-30	123.00
IUUC-Loc-051748	Lepisosteus oculatus	43.27	2.00e-15	75.10
IUUC-Lma-053328	Leptosphaeria maculans	65.75	1.00e-21	92.00
IUUC-Laf-054293	Loxodonta africana	41.07	3.00e-15	74.30
IUUC-Mcc-055600	Macaca mulatta	41.07	3.00e-15	73.90
IUUC-Meu-056082	Macropus eugenii	41.44	2.00e-15	75.10
IUUC-Mor-057287	Magnaporthe oryzae	61.60	9.00e-50	189.00
IUUC-Mpo-057609	Magnaporthe poae	76.03	8.00e-35	139.00
IUUC-Mtr-058713	Medicago truncatula	36.60	8.00e-29	119.00
IUUC-Mla-058961	Melampsora laricipopulina	41.35	3.00e-20	90.90
IUUC-Mga-060060	Meleagris gallopavo	28.38	5.10e-01	26.60
IUUC-Mvi-060220	Microbotryum violaceum	44.27	2.00e-18	85.50
IUUC-Mmr-061759	Microcebus murinus	46.91	5.00e-16	76.60
IUUC-Mdo-061967	Monodelphis domestica	41.44	3.00e-15	74.30
IUUC-Mmu-063258	Mus musculus	50.00	1.00e-16	79.00
IUUC-Mac-064724	Musa acuminata	36.14	9.00e-31	125.00
IUUC-Mpu-066389	Mustela putorius furo	41.07	2.00e-15	74.70
IUUC-Mlu-067999	Myotis lucifugus	40.35	6.00e-15	73.60
IUUC-Nfi-068390	Neosartorya fischeri	57.85	3.00e-47	180.00
IUUC-Nle-069655	Nomascus leucogenys	48.72	1.00e-15	75.90
IUUC-Opr-070234	Ochotona princeps	48.21	1.00e-08	52.00
IUUC-Ont-072484	Oreochromis niloticus	38.00	2.00e-25	108.00
IUUC-Oan-073258	Ornithorhynchus anatinus	41.44	2.00e-15	73.60
IUUC-Ocu-074555	Oryctolagus cuniculus	39.26	7.00e-19	86.30
IUUC-Oba-075392	Oryza barthii	37.65	6.00e-28	116.00
IUUC-Obr-076909	Oryza brachyantha	33.05	1.00e-26	111.00
IUUC-Ogl-077021	Oryza glaberrima	46.97	7.00e-27	112.00
IUUC-Ogu-078883	Oryza glumaepatula	37.65	5.00e-28	116.00
IUUC-Oin-079817	Oryza indica	38.06	2.00e-28	117.00
IUUC-Olo-080929	Oryza longistaminata	37.65	5.00e-28	116.00
IUUC-Ome-081866	Oryza meridionalis	37.65	6.00e-28	116.00
IUUC-Oni-083092	Oryza nivara	38.06	2.00e-28	117.00
IUUC-Opu-083756	Oryza punctata	37.96	5.00e-28	116.00
IUUC-Oru-084816	Oryza rufipogon	38.06	2.00e-28	117.00
IUUC-Osa-086112	Oryza sativa	38.06	2.00e-28	117.00
IUUC-Ola-086540	Oryzias latipes	38.36	8.00e-14	69.70
IUUC-Olu-087843	Ostreococcus lucimarinus	41.09	6.00e-21	92.80
IUUC-Oga-088023	Otolemur garnettii	40.00	6.00e-15	73.20
IUUC-Oar-089964	Ovis aries	41.07	3.00e-15	74.30
IUUC-Ptr-091165	Pan troglodytes	41.07	3.00e-15	74.30
IUUC-Pan-092009	Papio anubis	50.00	1.00e-16	79.00
IUUC-Psi-093477	Pelodiscus sinensis	41.58	2.00e-13	68.20
IUUC-Pno-095064	Phaeosphaeria nodorum	55.26	2.00e-32	131.00
IUUC-Ppa-095654	Physcomitrella patens	45.67	1.00e-23	102.00
IUUC-Pfo-097385	Poecilia formosa	42.34	2.00e-22	97.80
IUUC-Pab-097868	Pongo abelii	41.07	3.00e-15	73.90
IUUC-Pop-099642	Populus trichocarpa	37.13	4.00e-29	120.00
IUUC-Pca-100348	Procavia capensis	45.67	1.00e-16	79.00
IUUC-Ppe-101830	Prunus persica	48.36	1.00e-24	105.00
IUUC-Pva-102137	Pteropus vampyrus	48.68	3.00e-15	74.30
IUUC-Pgr-103641	Puccinia graminis	49.33	3.00e-18	84.00
IUUC-Ptt-103717	Puccinia triticina	44.44	3.00e-21	94.40
IUUC-Pte-104303	Pyrenophora teres	56.05	2.00e-38	150.00
IUUC-Pyt-104580	Pyrenophora triticirepentis	56.85	2.00e-38	150.00
IUUC-Rno-104844	Rattus norvegicus	50.00	1.00e-16	79.30
IUUC-Sce-106214	Saccharomyces cerevisiae	33.33	3.00e-11	61.20
IUUC-Sha-107073	Sarcophilus harrisii	41.44	3.00e-15	74.30
IUUC-Sja-107851	Schizosaccharomyces japonicus	56.20	9.00e-29	119.00
IUUC-Spo-108298	Schizosaccharomyces pombe	45.31	2.00e-42	164.00
IUUC-Ssl-108382	Sclerotinia sclerotiorum	64.29	7.00e-27	112.00
IUUC-Smo-109129	Selaginella moellendorffii	46.15	1.00e-18	85.50
IUUC-Sit-110235	Setaria italica	46.46	8.00e-23	99.40
IUUC-Sly-111480	Solanum lycopersicum	35.37	2.00e-30	124.00
IUUC-Stu-112054	Solanum tuberosum	33.33	6.00e-29	119.00
IUUC-Sar-112925	Sorex araneus	41.07	3.00e-15	74.30
IUUC-Sbi-114835	Sorghum bicolor	46.46	2.00e-22	98.60
IUUC-Sre-114894	Sporisorium reilianum	50.70	7.00e-15	73.20
IUUC-Ssc-116329	Sus scrofa	41.07	3.00e-15	74.30
IUUC-Tgu-116918	Taeniopygia guttata	50.62	6.00e-18	83.20
IUUC-Tru-117920	Takifugu rubripes	40.00	8.00e-33	132.00
IUUC-Tsy-118836	Tarsius syrichta	41.07	2.00e-15	75.10
IUUC-Tni-120493	Tetraodon nigroviridis	49.60	3.00e-24	103.00
IUUC-Tca-121661	Theobroma cacao	38.40	1.00e-26	111.00
IUUC-Tre-121911	Trichoderma reesei	65.43	2.00e-58	217.00
IUUC-Tvi-122617	Trichoderma virens	64.05	1.00e-54	205.00
IUUC-Tae-124646	Triticum aestivum	48.87	1.00e-25	108.00
IUUC-Tur-126610	Triticum urartu	48.87	1.00e-25	109.00
IUUC-Tme-127092	Tuber melanosporum	65.35	6.00e-30	122.00
IUUC-Tbe-127493	Tupaia belangeri	41.07	4.00e-15	73.90
IUUC-Ttr-128464	Tursiops truncatus	41.07	3.00e-15	74.30
IUUC-Uma-129484	Ustilago maydis	52.11	2.00e-15	75.10
IUUC-Vda-129946	Verticillium dahliae	76.38	5.00e-38	150.00
IUUC-Vpa-130357	Vicugna pacos	45.61	1.00e-10	58.90
IUUC-Vvi-131039	Vitis vinifera	34.05	8.00e-29	119.00
IUUC-Xtr-132679	Xenopus tropicalis	47.44	9.00e-15	72.80
IUUC-Xma-133503	Xiphophorus maculatus	43.07	1.00e-22	99.00
IUUC-Yli-134615	Yarrowia lipolytica	52.89	7.00e-30	122.00
IUUC-Zma-135463	Zea mays	43.31	1.00e-22	98.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence