iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000006145.1	ENSLACT00000006981.1	ENSLACP00000006922.1
ENSLACG00000006145.1	ENSLACT00000006982.1	ENSLACP00000006923.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.10e-10	39.5	452	490
E3 activity/RING/U-box	1.50e-10	41.2	448	495

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+  f++ p+++pCgH+f+++Cl++          + rCPlC+
   Q: 452  CSLCMRLFFE-PVTTPCGHTFCKKCLERC------LDYKPRCPLCK 490
           **********.9**************999......99999*****7 PP

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplte 52
           ++f C++ + l+ +Pv++p+G+t+ ++++e++l+ + + cP+++++l e
   Q: 448  SDFECSLCMRLFFEPVTTPCGHTFCKKCLERCLDYKPR-CPLCKESLGE 495
           68*******************************99999.*****99943 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MSELLVSEEE GRRLGGGCKV AGGAVGPGGR LPVQVRLLRQ GQVLALGNHL QEALETYSVA 60
LSDGALRPEH LSTLVDCVLL GYKRRDHSWC RRGEQPSQEG DPPGCAAPTR PAGELMSCRG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGGCGCGCAC GTGACGCTGT GATTTTTATA TATAAGCATG TGGCACGGCA GTAGACCGTT 60
TTATTTTTCT TCTTGGTGGG ATGGGTAGTA GCGCTTAGAA CCAGCGACCC TAACAGACCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003111--Lon_substr-bd
IPR015947--PUA-like_domain
IPR011990--TPR-like_helical_dom
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51787--LON_N
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02190--LON_substr_bdg
PF13445--zf-RING_UBOX

SMART

SM00464--LON
SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

lcm:102353128

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000484	Aegilops tauschii	28.00	4.00e-09	55.10
IUUC-Aml-001989	Ailuropoda melanoleuca	64.44	0.00e+00	669.00
IUUC-Apl-003309	Anas platyrhynchos	68.63	1.00e-159	555.00
IUUC-Aca-004288	Anolis carolinensis	57.24	0.00e+00	764.00
IUUC-Ame-010716	Astyanax mexicanus	52.06	0.00e+00	674.00
IUUC-Bta-012903	Bos taurus	59.97	0.00e+00	687.00
IUUC-Cel-018356	Caenorhabditis elegans	34.15	1.00e-10	58.90
IUUC-Cja-019312	Callithrix jacchus	57.62	0.00e+00	723.00
IUUC-Cfa-020159	Canis familiaris	61.80	0.00e+00	704.00
IUUC-Cpo-022528	Cavia porcellus	64.56	0.00e+00	673.00
IUUC-Cre-022730	Chlamydomonas reinhardtii	73.08	3.00e-08	52.40
IUUC-Csa-023361	Chlorocebus sabaeus	59.51	0.00e+00	689.00
IUUC-Cho-024549	Choloepus hoffmanni	58.54	9.00e-163	566.00
IUUC-Dre-028195	Danio rerio	51.51	0.00e+00	697.00
IUUC-Dno-029284	Dasypus novemcinctus	64.55	0.00e+00	685.00
IUUC-Dor-031123	Dipodomys ordii	58.08	5.00e-141	494.00
IUUC-Ete-032455	Echinops telfairi	69.42	4.00e-160	557.00
IUUC-Eca-033248	Equus caballus	69.50	1.00e-160	558.00
IUUC-Eeu-034441	Erinaceus europaeus	69.48	1.00e-161	562.00
IUUC-Fca-035551	Felis catus	64.56	0.00e+00	680.00
IUUC-Fal-036731	Ficedula albicollis	65.97	0.00e+00	695.00
IUUC-Gmo-039315	Gadus morhua	49.93	0.00e+00	634.00
IUUC-Gga-040888	Gallus gallus	70.17	2.00e-167	581.00
IUUC-Gac-042121	Gasterosteus aculeatus	53.80	0.00e+00	714.00
IUUC-Ggo-044985	Gorilla gorilla	61.59	0.00e+00	679.00
IUUC-Hsa-046592	Homo sapiens	59.45	0.00e+00	696.00
IUUC-Itr-048573	Ictidomys tridecemlineatus	62.76	0.00e+00	701.00
IUUC-Laf-053431	Loxodonta africana	64.63	0.00e+00	684.00
IUUC-Mcc-055751	Macaca mulatta	59.23	0.00e+00	685.00
IUUC-Mvi-060228	Microbotryum violaceum	33.85	2.00e-47	184.00
IUUC-Mmr-061283	Microcebus murinus	57.92	0.00e+00	702.00
IUUC-Mmu-063169	Mus musculus	60.06	0.00e+00	697.00
IUUC-Mpu-066537	Mustela putorius furo	57.80	0.00e+00	711.00
IUUC-Mlu-067497	Myotis lucifugus	63.77	0.00e+00	682.00
IUUC-Nle-068971	Nomascus leucogenys	63.89	0.00e+00	671.00
IUUC-Opr-070791	Ochotona princeps	65.57	2.00e-177	615.00
IUUC-Ont-071548	Oreochromis niloticus	54.86	0.00e+00	721.00
IUUC-Oan-072747	Ornithorhynchus anatinus	70.00	2.00e-164	571.00
IUUC-Ocu-074928	Oryctolagus cuniculus	69.80	9.00e-163	566.00
IUUC-Ome-081927	Oryza meridionalis	42.86	6.00e-10	58.20
IUUC-Ola-086977	Oryzias latipes	52.39	0.00e+00	695.00
IUUC-Oga-088719	Otolemur garnettii	57.62	0.00e+00	711.00
IUUC-Oar-089577	Ovis aries	64.31	0.00e+00	677.00
IUUC-Ptr-090711	Pan troglodytes	59.45	0.00e+00	696.00
IUUC-Pan-092587	Papio anubis	59.45	0.00e+00	698.00
IUUC-Psi-093128	Pelodiscus sinensis	62.67	0.00e+00	696.00
IUUC-Pfo-096474	Poecilia formosa	52.35	0.00e+00	697.00
IUUC-Pab-097800	Pongo abelii	59.23	0.00e+00	689.00
IUUC-Rno-105718	Rattus norvegicus	59.56	0.00e+00	666.00
IUUC-Sja-107742	Schizosaccharomyces japonicus	36.20	2.00e-30	126.00
IUUC-Spo-108344	Schizosaccharomyces pombe	34.36	2.00e-24	107.00
IUUC-Sar-113220	Sorex araneus	67.85	2.00e-151	528.00
IUUC-Ssc-115733	Sus scrofa	56.81	0.00e+00	712.00
IUUC-Tgu-117431	Taeniopygia guttata	60.85	0.00e+00	725.00
IUUC-Tru-118274	Takifugu rubripes	52.17	0.00e+00	671.00
IUUC-Tsy-119043	Tarsius syrichta	55.29	0.00e+00	701.00
IUUC-Tni-120766	Tetraodon nigroviridis	52.49	7.00e-180	623.00
IUUC-Tbe-127284	Tupaia belangeri	69.80	1.00e-158	552.00
IUUC-Vpa-130408	Vicugna pacos	58.07	1.00e-168	586.00
IUUC-Xtr-132417	Xenopus tropicalis	54.03	0.00e+00	697.00
IUUC-Xma-134099	Xiphophorus maculatus	53.41	0.00e+00	702.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence