iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Eca-034428

UUCD1 version

UUC-EqC-00322

Ensembl Protein ID

ENSECAP00000006373.1

UniProt Accession

F6VAB9; F6VAB9_HORSE

Protein Name

Uncharacterized protein

Gene Name

WDR88

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSECAG00000008371.1	ENSECAT00000008500.1	ENSECAP00000006373.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.90e-41	136.6	9	47
UBD/Beta-Prp	5.00e-56	190.2	133	317

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH+  v++++f  +dt l+sGs+D+t+k+WD  +g +++
   Q: 9    GHKHVVSSCHFcvDDTKLLSGSYDCTVKLWDAMDGSVVQ 47
           8***********777****************98887765 PP

UBD/Beta-Prp

   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseDrtikvwdls......tgk 85
            +k+hh+  + + +f pd++ +a+ s d++ik+wdvt++ +l ++ + h ++++ ++f  +g +l t+s D+t+k+w++       +g 
   Q: 133  HIKDHHERSVMACCFDPDSQKVASVSLDRSIKIWDVTSQATLLTItKAHANAISNCCFTFSGHFLCTSSWDKTLKIWNVHtgefrnQGA 221
           6899*************************************99999*******************************999999999999 PP
   S: 86   cvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl.......k 167
           cv  ++ghe  v s++f ++++ lvsG+ drt+ +wd+ +g+     l+gh+++v+ v+++++++ + s+s+Drt+rlW++        
   Q: 222  CVTLMRGHEGCVSSCHFARDTSILVSGGFDRTVAIWDVGEGYRKL-SLKGHNDWVMDVAISSNKKWILSASKDRTMRLWNIedideipL 309
           *********************************************.**********************************966666665 PP
   S: 168  tgkllrtl 175
            +++ +tl
   Q: 310  VMECKKTL 317
           55555555 PP

Organism

Equus caballus

Protein Sequence
(Fasta)

QIPFKIMRGH KHVVSSCHFC VDDTKLLSGS YDCTVKLWDA MDGSVVQDFK PSPEGPVLEC 60
SVTADSRRIV AASYDKTVKA WDLETGKLLW EISHETFIAS CKFSPDGKYV VSGLDVDCGI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGATCCCAT TTAAGATTAT GAGGGGACAC AAGCACGTCG TGAGCTCCTG TCACTTCTGC 60
GTGGATGACA CAAAGCTCCT CAGCGGCTCC TATGACTGCA CCGTGAAGCT GTGGGTAGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR018391--PQQ_beta_propeller_repeat
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00564--PQQ
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001328	Ailuropoda melanoleuca	83.23	4.00e-160	556.00
IUUC-Apl-003571	Anas platyrhynchos	56.66	6.00e-120	423.00
IUUC-Aca-005232	Anolis carolinensis	48.82	1.00e-77	282.00
IUUC-Ame-011833	Astyanax mexicanus	51.55	1.00e-55	209.00
IUUC-Bta-013562	Bos taurus	84.83	0.00e+00	630.00
IUUC-Cja-019202	Callithrix jacchus	79.05	5.00e-173	600.00
IUUC-Cfa-021095	Canis familiaris	81.48	9.00e-176	609.00
IUUC-Cpo-022170	Cavia porcellus	78.00	4.00e-165	573.00
IUUC-Csa-024218	Chlorocebus sabaeus	81.18	6.00e-178	616.00
IUUC-Cho-024561	Choloepus hoffmanni	79.03	1.00e-128	452.00
IUUC-Dno-029722	Dasypus novemcinctus	77.53	6.00e-162	563.00
IUUC-Dor-030464	Dipodomys ordii	67.70	4.00e-133	467.00
IUUC-Ete-032931	Echinops telfairi	63.21	2.00e-114	404.00
IUUC-Eeu-034568	Erinaceus europaeus	62.07	1.00e-119	422.00
IUUC-Fca-035707	Felis catus	80.62	4.00e-170	590.00
IUUC-Gmo-039646	Gadus morhua	45.34	1.00e-74	273.00
IUUC-Gga-040710	Gallus gallus	56.29	4.00e-115	407.00
IUUC-Ggo-044611	Gorilla gorilla	67.81	5.00e-94	337.00
IUUC-Hsa-046138	Homo sapiens	80.62	8.00e-176	609.00
IUUC-Itr-048283	Ictidomys tridecemlineatus	72.57	1.00e-155	542.00
IUUC-Lch-050329	Latimeria chalumnae	50.71	3.00e-109	388.00
IUUC-Loc-052876	Lepisosteus oculatus	42.96	2.00e-31	128.00
IUUC-Laf-053777	Loxodonta africana	79.38	2.00e-170	591.00
IUUC-Mcc-055771	Macaca mulatta	80.62	6.00e-177	613.00
IUUC-Meu-056584	Macropus eugenii	46.96	2.00e-82	299.00
IUUC-Mga-059818	Meleagris gallopavo	55.81	9.00e-116	409.00
IUUC-Mmr-060639	Microcebus murinus	77.01	2.00e-164	571.00
IUUC-Mdo-062321	Monodelphis domestica	58.92	1.00e-131	462.00
IUUC-Mpu-066849	Mustela putorius furo	81.92	2.00e-176	611.00
IUUC-Mlu-067238	Myotis lucifugus	75.28	3.00e-160	557.00
IUUC-Ont-071230	Oreochromis niloticus	43.10	2.00e-80	292.00
IUUC-Oan-072698	Ornithorhynchus anatinus	64.96	3.00e-144	504.00
IUUC-Ocu-074219	Oryctolagus cuniculus	81.42	4.00e-162	563.00
IUUC-Oga-087913	Otolemur garnettii	73.31	4.00e-165	574.00
IUUC-Oar-089977	Ovis aries	85.11	0.00e+00	633.00
IUUC-Ptr-090876	Pan troglodytes	80.90	7.00e-177	613.00
IUUC-Pan-091936	Papio anubis	81.97	6.00e-115	406.00
IUUC-Psi-093015	Pelodiscus sinensis	52.80	2.00e-76	278.00
IUUC-Pma-094552	Petromyzon marinus	35.59	2.00e-33	134.00
IUUC-Pfo-096240	Poecilia formosa	43.00	4.00e-78	286.00
IUUC-Pab-097983	Pongo abelii	70.79	4.00e-149	520.00
IUUC-Pca-100752	Procavia capensis	69.50	7.00e-130	457.00
IUUC-Pva-102199	Pteropus vampyrus	75.56	3.00e-167	581.00
IUUC-Rno-106062	Rattus norvegicus	71.47	1.00e-159	556.00
IUUC-Sar-113167	Sorex araneus	39.65	1.00e-52	199.00
IUUC-Ssc-116089	Sus scrofa	82.58	2.00e-176	611.00
IUUC-Tur-126500	Triticum urartu	29.55	2.00e-22	100.00
IUUC-Tbe-127860	Tupaia belangeri	70.22	9.00e-151	526.00
IUUC-Ttr-129152	Tursiops truncatus	82.30	2.00e-175	608.00
IUUC-Vpa-130745	Vicugna pacos	81.41	2.00e-174	605.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence