iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mmr-060700

Ensembl Protein ID

ENSMICP00000030690.1

UniProt Accession

G5CYR6; G5CYR6_MICMU

Genbank Protein ID

AEP18770.1

Protein Name

Recombination activating protein 1

Genbank Nucleotide ID

JN414943

Gene Name

RAG1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMICG00000031942.1	ENSMICT00000048650.1	ENSMICP00000030690.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.80e-07	32.3	18	58

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C+iC+e +k+++++  C+Hvf+++C+  ++          ++CPlCr
   Q: 18   CPICQEVLKTPVRTAACQHVFCRKCFlTAM------RESGIHCPLCR 58
           **********999999*********96666......999*******8 PP

Organism

Microcebus murinus

Protein Sequence
(Fasta)

MAEELSAATS YTENDFYCPI CQEVLKTPVR TAACQHVFCR KCFLTAMRES GIHCPLCRGN 60
VTRRERACPE RALDLEDIMR KFSGSCRCCA KQIKFYRMRH HYKSCKKYQD EYGVSSIIPN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGAGG AACTCTCTGC GGCCACGTCC TACACCGAAA ATGATTTCTA CTGCCCCATC 60
TGTCAGGAGG TGCTCAAGAC ACCGGTGCGG ACTGCGGCCT GTCAGCACGT TTTCTGTAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0233--DNA recombination
KW-0238--DNA-binding
KW-0539--Nucleus

Interpro

IPR024627--RAG1
IPR019485--RAG1_Znf
IPR023336--RAG_nonamer-bd_dom
IPR013087--Znf_C2H2_type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51487--NBD
PS51765--ZF_RAG1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF12940--RAG1
PF10426--zf-RAG1

SMART

SM00184--RING

Gene Ontology

GO:0005634--C:nucleus
GO:0004519--F:endonuclease activity
GO:0043565--F:sequence-specific DNA binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0033151--P:V(D)J recombination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ete-032453	Echinops telfairi	91.54	3.00e-68	251.00
IUUC-Fox-037926	Fusarium oxysporum	37.80	7.00e-10	57.40
IUUC-Pca-100822	Procavia capensis	89.19	4.00e-116	410.00
IUUC-Sar-113678	Sorex araneus	96.39	3.00e-45	174.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence