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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Rno-106030
UUCD1 version UUC-RaN-00085
Ensembl Protein ID ENSRNOP00000003088.3
UniProt Accession B6RHI6; B6RHI6_RAT
Genbank Protein ID ABW87494.1; EDL89936.1
Protein Name Ligand of numb-protein X 1; Ligand of numb-protein X 1 (Predicted), isoform CRA_a
Genbank Nucleotide ID AC099101; CH473981
Gene Name Lnx1; Lnx1_predicted; rCG_57041
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000002272.5 ENSRNOT00000003088.5 ENSRNOP00000003088.3
ENSRNOG00000002272.5 ENSRNOT00000082183.1 ENSRNOP00000069112.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IIDHINT
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 87.16 0.00e+00 1282.00 IUUC-Hsa-046470
E3 activity/RING/RING 95.47 0.00e+00 1402.00 IUUC-Mmu-063364
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MNQPDLADDP DPSPEPLCVV CGQNHSPEEN HFYTYTEDVD DDLVCHICLQ ALLDPLDTPC 60
GHTYCTLCLT NFLVEKDFCP VDRKPVVLQH CKKSNILVNK LLNKLLVNCP FTEHCSEVLQ 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-106030|E3,RING|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GAAGTTGAGA CCAGTCACAG CTCAGGCAGC CCTAGAAGCT TCTGGCACAG GGATGGAGGC 60
GGGCTGGTGA CTGCTGCTTT GAAAGCCCCA GACATCTTTG AACAGGTGAG CAGGAACTAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-106030|E3,RING|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
Interpro

IPR001478--PDZ
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
PROSITE

PS50106--PDZ
PS00518--ZF_RING_1
PS50089--ZF_RING_2
Pfam

PF00595--PDZ
SMART

SM00228--PDZ
SM00184--RING
Gene Ontology

GO:0005737--C:cytoplasm
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0051260--P:protein homooligomerization
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
KEGG rno:360926
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002005 Ailuropoda melanoleuca 86.03 0.00e+00 1187.00
IUUC-Apl-003561 Anas platyrhynchos 72.06 0.00e+00 998.00
IUUC-Aca-005346 Anolis carolinensis 70.98 0.00e+00 1032.00
IUUC-Bta-012970 Bos taurus 86.61 0.00e+00 1213.00
IUUC-Cja-019412 Callithrix jacchus 85.52 0.00e+00 1231.00
IUUC-Cfa-020735 Canis familiaris 86.61 0.00e+00 1259.00
IUUC-Cpo-022198 Cavia porcellus 76.71 0.00e+00 1040.00
IUUC-Dre-028841 Danio rerio 48.25 6.00e-30 123.00
IUUC-Dno-028889 Dasypus novemcinctus 87.53 0.00e+00 1269.00
IUUC-Dor-030810 Dipodomys ordii 78.58 0.00e+00 927.00
IUUC-Fca-036264 Felis catus 87.19 0.00e+00 1197.00
IUUC-Fal-037198 Ficedula albicollis 72.08 0.00e+00 1052.00
IUUC-Gga-040766 Gallus gallus 67.97 0.00e+00 999.00
IUUC-Ggo-045057 Gorilla gorilla 87.30 0.00e+00 1270.00
IUUC-Hsa-046470 Homo sapiens 87.16 0.00e+00 1293.00
IUUC-Itr-048393 Ictidomys tridecemlineatus 89.03 0.00e+00 1320.00
IUUC-Lch-050081 Latimeria chalumnae 63.39 0.00e+00 908.00
IUUC-Loc-052884 Lepisosteus oculatus 60.79 0.00e+00 884.00
IUUC-Laf-054498 Loxodonta africana 87.84 0.00e+00 1265.00
IUUC-Meu-056401 Macropus eugenii 54.27 1.00e-140 493.00
IUUC-Mga-059504 Meleagris gallopavo 72.50 0.00e+00 1038.00
IUUC-Mmr-060696 Microcebus murinus 62.04 0.00e+00 752.00
IUUC-Mdo-062731 Monodelphis domestica 79.94 0.00e+00 1160.00
IUUC-Mmu-063364 Mus musculus 95.47 0.00e+00 1412.00
IUUC-Mpu-066626 Mustela putorius furo 86.07 0.00e+00 1243.00
IUUC-Mlu-068207 Myotis lucifugus 85.75 0.00e+00 1206.00
IUUC-Nle-069304 Nomascus leucogenys 87.30 0.00e+00 1294.00
IUUC-Opr-071080 Ochotona princeps 73.40 0.00e+00 1036.00
IUUC-Ont-072002 Oreochromis niloticus 58.96 0.00e+00 798.00
IUUC-Ola-086477 Oryzias latipes 57.92 0.00e+00 818.00
IUUC-Oga-089142 Otolemur garnettii 84.45 0.00e+00 1221.00
IUUC-Oar-090359 Ovis aries 85.93 0.00e+00 1224.00
IUUC-Ptr-090797 Pan troglodytes 87.30 0.00e+00 1293.00
IUUC-Pan-091910 Papio anubis 86.61 0.00e+00 1280.00
IUUC-Psi-093386 Pelodiscus sinensis 73.26 0.00e+00 1035.00
IUUC-Pfo-096370 Poecilia formosa 58.84 0.00e+00 792.00
IUUC-Pab-097761 Pongo abelii 87.77 0.00e+00 1000.00
IUUC-Pva-102443 Pteropus vampyrus 87.00 0.00e+00 944.00
IUUC-Sha-107609 Sarcophilus harrisii 78.20 0.00e+00 1143.00
IUUC-Sar-113333 Sorex araneus 85.62 0.00e+00 1242.00
IUUC-Ssc-116222 Sus scrofa 78.02 0.00e+00 1096.00
IUUC-Tgu-117019 Taeniopygia guttata 72.32 0.00e+00 1023.00
IUUC-Tru-118481 Takifugu rubripes 61.07 0.00e+00 842.00
IUUC-Tni-119796 Tetraodon nigroviridis 52.42 0.00e+00 688.00
IUUC-Tbe-127538 Tupaia belangeri 84.43 0.00e+00 1201.00
IUUC-Ttr-128787 Tursiops truncatus 84.31 0.00e+00 1180.00
IUUC-Xtr-132476 Xenopus tropicalis 62.05 0.00e+00 839.00
Created Date 25-Jun-2017

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