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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Cel-018413
Ensembl Protein ID F42H10.3a
UniProt Accession P34416; P34417; P34421; Q6AHR7; LASP1_CAEEL
Genbank Protein ID CCD62883.1
Protein Name LIM and SH3 domain protein F42H10.3
Genbank Nucleotide ID FO080327
Gene Name F42H10.3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
WBGene00018367 F42H10.3a F42H10.3a
WBGene00018367 F42H10.3b F42H10.3b
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNAmiRNAMapRAID2
Protein-protein Interaction
IIDiRefIndexPINAMentha
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
UBD/SH3 1.80e-12 47.3 269 323
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   UBD/SH3
   S: 4    ekvqvlydyeaqnddeLtlkkGdvvlviekeeqdegWlkgvkelegkrGlfPenFve 60
           + v+++ydy a+++de ++ +Gd++     e+ d gW+ g+ + + + G++P+n+v+
   Q: 269  FAVKAIYDYAAADKDEISFLEGDIIVNC--EKIDDGWMTGTVQRTLQWGMLPANYVQ 323
           579*********************9887..9************************98 PP
   
Organism Caenorhabditis elegans
Protein Sequence
(Fasta)
MSKKCAREDC GKTVYPVEEL KCLDKVWHKQ CFKCTVCGMT LNMKNYKGYD KRPYCDPHYP 60
KTVASVMADT PEMRRIAENT KNQSNIKYHA EYEKMKGTKI EIADDPEMER LKKNTQVQSN 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Cel-018413|UBD,SH3|Caenorhabditis elegans
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGAGCAAAA AGTGTGCTCG CGAAGATTGC GGGAAGACGG TATATCCAGT TGAGGAACTG 60
AAATGTCTTG ATAAAGTTTG GCACAAGCAA TGCTTCAAAT GCACTGTTTG CGGAATGACA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Cel-018413|UBD,SH3|Caenorhabditis elegans
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0440--LIM domain
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0728--SH3 domain
KW-0862--Zinc
Interpro

IPR000900--Nebulin_repeat
IPR001452--SH3_domain
IPR001781--Znf_LIM
PROSITE

PS50023--LIM_DOMAIN_2
PS51216--NEBULIN
PS50002--SH3
Pfam

PF00412--LIM
PF00880--Nebulin
PF00018--SH3_1
PRINTS

PR00452--SH3DOMAIN
SMART

SM00132--LIM
SM00227--NEBU
SM00326--SH3
Gene Ontology

GO:0030054--C:cell junction
GO:0055120--C:striated muscle dense body
GO:0008270--F:zinc ion binding
KEGG cel:CELE_F42H10.3
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000663 Aegilops tauschii 35.56 3.00e-05 42.00
IUUC-Aml-001609 Ailuropoda melanoleuca 52.80 1.00e-32 131.00
IUUC-Atr-002465 Amborella trichopoda 29.82 3.00e-03 35.40
IUUC-Apl-003494 Anas platyrhynchos 51.89 5.00e-26 109.00
IUUC-Aca-004462 Anolis carolinensis 53.60 1.00e-33 134.00
IUUC-Aly-005589 Arabidopsis lyrata 34.04 9.00e-03 33.90
IUUC-Ath-007530 Arabidopsis thaliana 34.04 8.00e-03 34.30
IUUC-Ame-011113 Astyanax mexicanus 46.75 4.00e-34 136.00
IUUC-Bta-012469 Bos taurus 52.00 4.00e-32 130.00
IUUC-Bol-015361 Brassica oleracea 34.04 1.00e-02 33.90
IUUC-Cja-019147 Callithrix jacchus 65.38 2.00e-17 83.60
IUUC-Cfa-020384 Canis familiaris 52.80 1.00e-32 131.00
IUUC-Cpo-022244 Cavia porcellus 50.50 1.00e-24 105.00
IUUC-Csa-023039 Chlorocebus sabaeus 52.80 3.00e-33 134.00
IUUC-Cho-024491 Choloepus hoffmanni 66.67 5.00e-17 84.70
IUUC-Cin-025236 Ciona intestinalis 43.06 1.00e-28 118.00
IUUC-Csv-026030 Ciona savignyi 56.82 9.00e-28 115.00
IUUC-Dre-028335 Danio rerio 52.80 2.00e-32 130.00
IUUC-Dno-029377 Dasypus novemcinctus 50.57 2.00e-18 84.30
IUUC-Dor-031101 Dipodomys ordii 51.04 2.00e-22 98.20
IUUC-Dme-031598 Drosophila melanogaster 63.64 1.00e-52 200.00
IUUC-Ete-032651 Echinops telfairi 67.50 1.00e-10 63.50
IUUC-Eca-033966 Equus caballus 50.50 1.00e-24 105.00
IUUC-Eeu-034613 Erinaceus europaeus 28.72 2.00e-18 87.00
IUUC-Fca-035699 Felis catus 52.80 8.00e-33 132.00
IUUC-Fal-037112 Ficedula albicollis 64.91 2.00e-18 86.70
IUUC-Gmo-039493 Gadus morhua 58.59 4.00e-27 113.00
IUUC-Gga-040316 Gallus gallus 51.54 1.00e-33 135.00
IUUC-Gac-042632 Gasterosteus aculeatus 48.92 3.00e-37 147.00
IUUC-Gma-043003 Glycine max 31.91 5.00e-03 35.00
IUUC-Ggo-044835 Gorilla gorilla 52.80 4.00e-33 133.00
IUUC-Hsa-046825 Homo sapiens 52.80 3.00e-33 133.00
IUUC-Hvu-047787 Hordeum vulgare 40.00 7.00e-06 44.30
IUUC-Itr-048498 Ictidomys tridecemlineatus 50.50 8.00e-25 105.00
IUUC-Lch-049942 Latimeria chalumnae 63.46 2.00e-17 83.60
IUUC-Lpe-050758 Leersia perrieri 66.67 1.00e-03 37.00
IUUC-Loc-052082 Lepisosteus oculatus 53.60 2.00e-33 134.00
IUUC-Laf-053578 Loxodonta africana 52.00 2.00e-32 130.00
IUUC-Mcc-055650 Macaca mulatta 52.80 3.00e-33 133.00
IUUC-Meu-056479 Macropus eugenii 51.52 2.00e-24 104.00
IUUC-Mtr-058103 Medicago truncatula 34.04 6.00e-04 37.70
IUUC-Mga-059763 Meleagris gallopavo 49.54 2.00e-25 107.00
IUUC-Mmr-061164 Microcebus murinus 52.80 3.00e-33 133.00
IUUC-Mdo-061979 Monodelphis domestica 52.80 4.00e-33 133.00
IUUC-Mmu-063302 Mus musculus 43.86 3.00e-33 134.00
IUUC-Mac-065516 Musa acuminata 50.00 3.00e-03 32.70
IUUC-Mpu-066114 Mustela putorius furo 52.80 7.00e-33 132.00
IUUC-Mlu-068217 Myotis lucifugus 52.80 4.00e-33 133.00
IUUC-Nle-069636 Nomascus leucogenys 61.29 8.00e-19 85.90
IUUC-Opr-070892 Ochotona princeps 52.80 5.00e-37 146.00
IUUC-Ont-072280 Oreochromis niloticus 51.20 4.00e-35 139.00
IUUC-Oan-072876 Ornithorhynchus anatinus 33.21 5.00e-26 112.00
IUUC-Ocu-073804 Oryctolagus cuniculus 52.80 4.00e-37 146.00
IUUC-Oba-075638 Oryza barthii 37.14 9.00e-05 40.40
IUUC-Obr-076045 Oryza brachyantha 37.14 1.00e-04 40.00
IUUC-Ogl-077659 Oryza glaberrima 32.08 1.00e-04 40.00
IUUC-Ogu-078055 Oryza glumaepatula 61.11 2.00e-03 35.80
IUUC-Oin-079541 Oryza indica 37.14 3.00e-04 38.90
IUUC-Olo-081092 Oryza longistaminata 61.11 3.00e-03 35.80
IUUC-Oni-082309 Oryza nivara 61.11 2.00e-03 35.80
IUUC-Opu-083412 Oryza punctata 32.08 1.00e-04 40.40
IUUC-Oru-085213 Oryza rufipogon 61.11 2.00e-03 35.80
IUUC-Osa-085312 Oryza sativa 32.08 1.00e-04 40.00
IUUC-Ola-086514 Oryzias latipes 49.62 2.00e-35 141.00
IUUC-Oga-088707 Otolemur garnettii 52.80 4.00e-33 133.00
IUUC-Oar-089771 Ovis aries 52.00 2.00e-32 130.00
IUUC-Ptr-091237 Pan troglodytes 52.80 3.00e-33 133.00
IUUC-Pan-092656 Papio anubis 52.80 3.00e-33 133.00
IUUC-Psi-093861 Pelodiscus sinensis 28.57 6.00e-23 101.00
IUUC-Pma-094377 Petromyzon marinus 33.97 6.00e-33 132.00
IUUC-Pno-094933 Phaeosphaeria nodorum 25.00 5.00e-04 38.50
IUUC-Ppa-096027 Physcomitrella patens 34.29 1.70e-02 33.10
IUUC-Pfo-097079 Poecilia formosa 43.97 5.00e-32 129.00
IUUC-Pab-097833 Pongo abelii 52.80 3.00e-33 134.00
IUUC-Pop-100076 Populus trichocarpa 34.29 1.00e-03 36.60
IUUC-Pca-100691 Procavia capensis 52.00 3.00e-32 130.00
IUUC-Pva-102270 Pteropus vampyrus 52.80 4.00e-33 133.00
IUUC-Ptt-103703 Puccinia triticina 39.66 1.00e-09 56.60
IUUC-Rno-105362 Rattus norvegicus 52.80 2.00e-33 134.00
IUUC-Sce-106228 Saccharomyces cerevisiae 40.00 3.00e-06 45.80
IUUC-Sha-107134 Sarcophilus harrisii 49.06 2.00e-25 107.00
IUUC-Smo-108841 Selaginella moellendorffii 35.09 2.00e-05 42.00
IUUC-Sly-111106 Solanum lycopersicum 36.17 7.00e-04 37.70
IUUC-Stu-112570 Solanum tuberosum 36.17 6.00e-04 37.70
IUUC-Sar-113072 Sorex araneus 29.18 4.00e-20 92.40
IUUC-Sbi-114441 Sorghum bicolor 32.50 8.00e-04 37.00
IUUC-Ssc-115305 Sus scrofa 29.51 5.00e-21 95.50
IUUC-Tru-118693 Takifugu rubripes 53.23 8.00e-37 145.00
IUUC-Tsy-119452 Tarsius syrichta 65.38 2.00e-17 83.20
IUUC-Tni-120393 Tetraodon nigroviridis 52.00 3.00e-35 140.00
IUUC-Tca-121863 Theobroma cacao 36.17 2.00e-04 39.70
IUUC-Tae-123416 Triticum aestivum 35.56 3.00e-05 42.00
IUUC-Tur-126326 Triticum urartu 35.56 4.00e-05 41.60
IUUC-Tbe-127585 Tupaia belangeri 65.38 2.00e-17 83.20
IUUC-Ttr-128639 Tursiops truncatus 48.00 1.00e-27 115.00
IUUC-Vpa-130364 Vicugna pacos 43.24 2.00e-11 66.20
IUUC-Vvi-131569 Vitis vinifera 34.29 1.00e-03 37.00
IUUC-Xtr-131827 Xenopus tropicalis 49.23 4.00e-35 139.00
IUUC-Xma-134054 Xiphophorus maculatus 52.80 3.00e-36 143.00
IUUC-Zma-135630 Zea mays 28.12 1.40e-02 33.10
Created Date 25-Jun-2017

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