iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.8__2251__AT5G62560.1	fgenesh2_kg.8__2251__AT5G62560.1	fgenesh2_kg.8__2251__AT5G62560.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.40e-20	73.8	31	103

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p+eflCpI++ lM+dPvv++sG+t++r s++ + + g   + +++++ + ++++Pnl+++++i +wc++n++
   Q: 31   TPPEFLCPITGFLMSDPVVVSSGQTFERLSVQVCRNLGYIPDLLDGTRPDLSTVIPNLAMKSTIFSWCDRNKV 103
           79********************************************************************986 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGGNKQKWYS FHQRSSSATT TTIPQHKHDE TPPEFLCPIT GFLMSDPVVV SSGQTFERLS 60
VQVCRNLGYI PDLLDGTRPD LSTVIPNLAM KSTIFSWCDR NKVDHPRPPD SAYVEGVVRA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTTAGCTC GGAGCCGCTT CTTCTTCATC TTCTTCCTCC TCTCAAAAAC CTAATTTTTC 60
CTCCGATGGG TGGAAATAAG CAGAAATGGT ACTCTTTCCA CCAACGATCC TCATCCGCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

aly:ARALYDRAFT_496435

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007483	Arabidopsis thaliana	95.19	0.00e+00	985.00
IUUC-Bta-013555	Bos taurus	30.77	4.00e-08	53.50
IUUC-Bol-015381	Brassica oleracea	82.72	0.00e+00	868.00
IUUC-Bra-017860	Brassica rapa	84.10	0.00e+00	875.00
IUUC-Cpo-021441	Cavia porcellus	30.28	7.00e-10	59.30
IUUC-Csa-023874	Chlorocebus sabaeus	30.88	9.00e-10	58.90
IUUC-Ete-032470	Echinops telfairi	30.88	3.00e-09	57.40
IUUC-Fca-035957	Felis catus	31.62	3.00e-10	60.50
IUUC-Gac-041812	Gasterosteus aculeatus	29.21	1.00e-09	58.50
IUUC-Ggo-045030	Gorilla gorilla	30.77	5.00e-08	53.10
IUUC-Hsa-046644	Homo sapiens	30.88	1.00e-09	58.20
IUUC-Itr-048617	Ictidomys tridecemlineatus	30.88	4.00e-09	56.60
IUUC-Mcc-055873	Macaca mulatta	30.88	7.00e-10	58.20
IUUC-Meu-056121	Macropus eugenii	33.59	2.00e-08	54.30
IUUC-Mga-059688	Meleagris gallopavo	32.61	3.00e-12	67.40
IUUC-Mmr-061778	Microcebus murinus	33.06	1.00e-10	59.70
IUUC-Mlu-067208	Myotis lucifugus	30.77	4.00e-08	53.50
IUUC-Ocu-074455	Oryctolagus cuniculus	32.35	1.00e-09	58.50
IUUC-Ogl-077033	Oryza glaberrima	40.00	8.00e-39	154.00
IUUC-Ogu-078087	Oryza glumaepatula	40.00	2.00e-38	152.00
IUUC-Oin-079818	Oryza indica	38.14	1.00e-35	142.00
IUUC-Oni-082747	Oryza nivara	40.65	7.00e-40	157.00
IUUC-Opu-084021	Oryza punctata	41.80	2.00e-43	169.00
IUUC-Oru-084445	Oryza rufipogon	40.65	2.00e-39	157.00
IUUC-Osa-085410	Oryza sativa	40.65	4.00e-40	158.00
IUUC-Oga-088587	Otolemur garnettii	30.77	2.00e-08	54.30
IUUC-Ptr-090915	Pan troglodytes	30.88	1.00e-09	58.50
IUUC-Pan-092171	Papio anubis	31.62	5.00e-10	59.70
IUUC-Pca-100151	Procavia capensis	30.15	3.00e-08	53.90
IUUC-Sha-107173	Sarcophilus harrisii	32.82	7.00e-08	52.80
IUUC-Sar-113307	Sorex araneus	30.77	4.00e-08	52.80
IUUC-Tru-118154	Takifugu rubripes	28.65	1.00e-08	55.10
IUUC-Tni-120112	Tetraodon nigroviridis	28.65	1.00e-08	55.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence