iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sha-106536

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01080134

Gene Name

RAB40C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000009079.1	ENSSHAT00000010612.1	ENSSHAP00000010519.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	1.90e-16	59.8	184	231

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box

   S: 1    lsklwllrseprSLqhLCRlaIrrclgsqrlkaidkLPLPksLkdYLlyedy 52
           ++k+w ++++++SLq+LC++aI++c++ + +   dkLPLP  +k++L+++++
   Q: 184  MEKIW-RPNRVFSLQDLCCRAIVSCTPVHLI---DKLPLPVTIKSHLKSFSM 231
           67899.**********************888...***************976 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MRGRMGTQGS PVKSYDYLLK FLLVGDSDVG KGEILESLQD GASESPYAYS NGIDYKTTTI 60
LLDGRRVKLE LWDTSGQGRF CTIFRSYSRG AQGILLVYDI TNRWSFDGID RWIKEIDEHA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATGGAGGAG TGTTTTTACC CGGAAGATCA ATGATGGAAG GTGAACTGGA CACAGAGTTC 60
CTTTTGAGAG GGTGAATCTT TCCTCGACTT TCACCCTCCC TCTTCAACAA CAACAACCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR027417--P-loop_NTPase
IPR005225--Small_GTP-bd_dom
IPR001806--Small_GTPase
IPR001496--SOCS_box

PROSITE

PS50225--SOCS

Pfam

PF00071--Ras
PF07525--SOCS_box

SMART

SM00253--SOCS
SM00969--SOCS_box

Gene Ontology

GO:0005622--C:intracellular
GO:0005525--F:GTP binding
GO:0016567--P:protein ubiquitination
GO:0007264--P:small GTPase mediated signal transduction

KEGG

shr:100924893

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001616	Ailuropoda melanoleuca	97.77	4.00e-142	496.00
IUUC-Apl-003799	Anas platyrhynchos	88.57	2.00e-127	447.00
IUUC-Aca-005004	Anolis carolinensis	79.34	8.00e-126	442.00
IUUC-Ame-011203	Astyanax mexicanus	91.58	4.00e-152	530.00
IUUC-Bta-013490	Bos taurus	97.86	7.00e-151	525.00
IUUC-Cja-019990	Callithrix jacchus	96.81	4.00e-149	520.00
IUUC-Cfa-020527	Canis familiaris	73.71	2.00e-95	342.00
IUUC-Cpo-022437	Cavia porcellus	98.17	4.00e-143	500.00
IUUC-Csa-024147	Chlorocebus sabaeus	97.51	2.00e-150	524.00
IUUC-Cho-024716	Choloepus hoffmanni	71.26	1.00e-68	251.00
IUUC-Dre-027427	Danio rerio	92.17	4.00e-151	526.00
IUUC-Dno-029998	Dasypus novemcinctus	91.53	1.00e-115	411.00
IUUC-Dor-030584	Dipodomys ordii	88.84	6.00e-109	385.00
IUUC-Dme-031810	Drosophila melanogaster	69.20	2.00e-94	338.00
IUUC-Ete-033080	Echinops telfairi	96.44	5.00e-143	499.00
IUUC-Eca-033423	Equus caballus	97.86	3.00e-126	443.00
IUUC-Eeu-034590	Erinaceus europaeus	88.84	3.00e-111	393.00
IUUC-Fca-035697	Felis catus	97.86	4.00e-121	426.00
IUUC-Fal-037070	Ficedula albicollis	99.29	1.00e-150	525.00
IUUC-Gmo-039605	Gadus morhua	90.75	6.00e-149	519.00
IUUC-Gga-040343	Gallus gallus	99.29	1.00e-150	525.00
IUUC-Gac-041833	Gasterosteus aculeatus	88.11	1.00e-142	498.00
IUUC-Ggo-045131	Gorilla gorilla	90.04	5.00e-133	466.00
IUUC-Hsa-046237	Homo sapiens	97.51	2.00e-150	524.00
IUUC-Itr-048902	Ictidomys tridecemlineatus	98.58	7.00e-151	525.00
IUUC-Lch-050193	Latimeria chalumnae	94.39	3.00e-155	540.00
IUUC-Loc-052243	Lepisosteus oculatus	92.28	2.00e-153	534.00
IUUC-Laf-054435	Loxodonta africana	96.80	3.00e-150	523.00
IUUC-Mcc-055337	Macaca mulatta	97.15	1.00e-149	521.00
IUUC-Meu-056731	Macropus eugenii	99.40	8.00e-81	293.00
IUUC-Mga-059204	Meleagris gallopavo	79.43	2.00e-134	471.00
IUUC-Mmr-061380	Microcebus murinus	98.21	9.00e-150	522.00
IUUC-Mdo-062438	Monodelphis domestica	100.00	8.00e-154	535.00
IUUC-Mmu-064046	Mus musculus	98.22	7.00e-151	525.00
IUUC-Mpu-066029	Mustela putorius furo	94.87	1.00e-122	431.00
IUUC-Mlu-067741	Myotis lucifugus	97.52	6.00e-151	526.00
IUUC-Nle-069240	Nomascus leucogenys	91.46	1.00e-137	481.00
IUUC-Opr-070662	Ochotona princeps	74.38	3.00e-126	444.00
IUUC-Ont-071248	Oreochromis niloticus	92.17	1.00e-150	525.00
IUUC-Oan-073432	Ornithorhynchus anatinus	97.02	1.00e-121	428.00
IUUC-Ocu-074559	Oryctolagus cuniculus	75.80	1.00e-124	438.00
IUUC-Olo-080270	Oryza longistaminata	34.41	4.00e-12	65.90
IUUC-Ola-086486	Oryzias latipes	85.31	4.00e-137	480.00
IUUC-Oga-088293	Otolemur garnettii	98.22	7.00e-151	525.00
IUUC-Oar-089702	Ovis aries	74.25	2.00e-104	370.00
IUUC-Ptr-090720	Pan troglodytes	97.51	2.00e-150	524.00
IUUC-Pan-091732	Papio anubis	97.51	2.00e-150	524.00
IUUC-Psi-093627	Pelodiscus sinensis	98.58	2.00e-143	501.00
IUUC-Pma-094679	Petromyzon marinus	76.57	7.00e-107	379.00
IUUC-Pfo-097105	Poecilia formosa	91.10	5.00e-150	523.00
IUUC-Pab-098054	Pongo abelii	97.51	2.00e-150	524.00
IUUC-Pca-100775	Procavia capensis	96.37	3.00e-89	320.00
IUUC-Pva-102658	Pteropus vampyrus	97.15	1.00e-149	521.00
IUUC-Rno-105303	Rattus norvegicus	98.22	7.00e-151	525.00
IUUC-Sar-113518	Sorex araneus	73.64	4.00e-108	383.00
IUUC-Ssc-115719	Sus scrofa	72.99	1.00e-120	425.00
IUUC-Tgu-116858	Taeniopygia guttata	99.48	1.00e-114	404.00
IUUC-Tru-118264	Takifugu rubripes	75.60	1.00e-137	482.00
IUUC-Tsy-119011	Tarsius syrichta	73.58	2.00e-85	307.00
IUUC-Tni-120350	Tetraodon nigroviridis	91.10	3.00e-149	520.00
IUUC-Ttr-129236	Tursiops truncatus	97.51	2.00e-152	530.00
IUUC-Xtr-132079	Xenopus tropicalis	79.08	9.00e-135	472.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence