iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Dre-028276

Ensembl Protein ID

ENSDARP00000116409.1

UniProt Accession

F1QXI6; F1QXI6_DANRE

Genbank Protein ID

ENSDARP00000056762

Protein Name

Intraflagellar transport 80 homolog (Chlamydomonas)

Genbank Nucleotide ID

CR478286

Gene Name

ift80

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000038879.5	ENSDART00000133943.2	ENSDARP00000116409.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-11	44.5	187	216

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWD 29
           H + +  +++   ++l++sG+ D++ kvWD
   Q: 187  HDGVILKVDWsaVNDLILSGGEDCKYKVWD 216
           99999*****99449*************** PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MRLKTSLLKE PKHRELVSCV GWTSADELYS CSDDHQILKW NLLSNDTSVV VKLQDEIYPI 60
DLHWFPKTVS GKKQAAAEIF ALTSSDGKLH LVSKSGRIEK SVEAHRGAVL AGRWNYDGTA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAACTCGTTC TCGCGAGACG TGGGGCCAGA GTTGTTTTAC CGTCAGTAAT CTTTCTAGTA 60
TGCTGCTACT AAGAAATCTG TAACGACTAA AAGGAGATTT GGGATGTAAT AAAGCGGCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR002469--Peptidase_S9B_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005813--C:centrosome
GO:0005929--C:cilium
GO:0030992--C:intraciliary transport particle B
GO:0060271--P:cilium assembly
GO:0060026--P:convergent extension
GO:0008104--P:protein localization
GO:0060042--P:retina morphogenesis in camera-type eye

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001564	Ailuropoda melanoleuca	79.91	0.00e+00	777.00
IUUC-Apl-003721	Anas platyrhynchos	74.90	0.00e+00	1237.00
IUUC-Aca-004488	Anolis carolinensis	75.50	0.00e+00	1250.00
IUUC-Ame-011402	Astyanax mexicanus	82.80	0.00e+00	844.00
IUUC-Bta-013037	Bos taurus	67.86	0.00e+00	1093.00
IUUC-Cel-018360	Caenorhabditis elegans	40.26	0.00e+00	655.00
IUUC-Cja-019076	Callithrix jacchus	70.31	0.00e+00	1009.00
IUUC-Cfa-020999	Canis familiaris	74.94	0.00e+00	1253.00
IUUC-Cpo-021333	Cavia porcellus	67.61	0.00e+00	1093.00
IUUC-Cre-022899	Chlamydomonas reinhardtii	47.19	0.00e+00	680.00
IUUC-Csa-023699	Chlorocebus sabaeus	74.53	0.00e+00	1244.00
IUUC-Cho-024904	Choloepus hoffmanni	71.52	0.00e+00	711.00
IUUC-Cin-025399	Ciona intestinalis	55.45	0.00e+00	938.00
IUUC-Csv-026186	Ciona savignyi	54.66	0.00e+00	922.00
IUUC-Dno-029824	Dasypus novemcinctus	75.07	0.00e+00	1257.00
IUUC-Dor-031141	Dipodomys ordii	71.41	0.00e+00	1177.00
IUUC-Dme-031620	Drosophila melanogaster	36.48	2.00e-143	503.00
IUUC-Ete-033028	Echinops telfairi	50.52	4.00e-110	392.00
IUUC-Eca-033339	Equus caballus	75.76	0.00e+00	1253.00
IUUC-Eeu-034909	Erinaceus europaeus	71.20	0.00e+00	802.00
IUUC-Fca-035780	Felis catus	75.20	0.00e+00	1229.00
IUUC-Fal-037447	Ficedula albicollis	70.15	0.00e+00	1144.00
IUUC-Gmo-038657	Gadus morhua	65.57	0.00e+00	858.00
IUUC-Gga-040689	Gallus gallus	75.47	0.00e+00	1243.00
IUUC-Gac-041586	Gasterosteus aculeatus	77.67	0.00e+00	1052.00
IUUC-Hsa-047005	Homo sapiens	74.80	0.00e+00	1267.00
IUUC-Itr-048757	Ictidomys tridecemlineatus	75.09	0.00e+00	922.00
IUUC-Lch-050459	Latimeria chalumnae	75.89	0.00e+00	1262.00
IUUC-Loc-052774	Lepisosteus oculatus	78.50	0.00e+00	1050.00
IUUC-Laf-053765	Loxodonta africana	73.94	0.00e+00	1207.00
IUUC-Mcc-055052	Macaca mulatta	74.53	0.00e+00	1244.00
IUUC-Meu-056368	Macropus eugenii	64.36	0.00e+00	1048.00
IUUC-Mga-059488	Meleagris gallopavo	75.23	0.00e+00	1239.00
IUUC-Mmr-061527	Microcebus murinus	74.70	0.00e+00	1237.00
IUUC-Mdo-062850	Monodelphis domestica	74.68	0.00e+00	1016.00
IUUC-Mmu-063117	Mus musculus	74.71	0.00e+00	1247.00
IUUC-Mpu-066550	Mustela putorius furo	75.15	0.00e+00	1137.00
IUUC-Mlu-067772	Myotis lucifugus	71.73	0.00e+00	1165.00
IUUC-Nle-069215	Nomascus leucogenys	73.88	0.00e+00	1251.00
IUUC-Opr-070725	Ochotona princeps	56.84	0.00e+00	896.00
IUUC-Ont-072147	Oreochromis niloticus	78.96	0.00e+00	1300.00
IUUC-Oan-073176	Ornithorhynchus anatinus	77.05	1.00e-56	211.00
IUUC-Ocu-073896	Oryctolagus cuniculus	70.82	0.00e+00	1009.00
IUUC-Ola-086767	Oryzias latipes	72.89	0.00e+00	987.00
IUUC-Oga-088113	Otolemur garnettii	74.18	0.00e+00	1254.00
IUUC-Oar-089683	Ovis aries	72.79	0.00e+00	1202.00
IUUC-Ptr-091563	Pan troglodytes	74.93	0.00e+00	1267.00
IUUC-Pan-092042	Papio anubis	74.67	0.00e+00	1245.00
IUUC-Psi-093306	Pelodiscus sinensis	75.82	0.00e+00	1293.00
IUUC-Ppa-095694	Physcomitrella patens	45.29	0.00e+00	706.00
IUUC-Pfo-096800	Poecilia formosa	77.86	0.00e+00	1273.00
IUUC-Pab-098356	Pongo abelii	74.67	0.00e+00	1263.00
IUUC-Pva-102246	Pteropus vampyrus	70.62	0.00e+00	1158.00
IUUC-Rno-105195	Rattus norvegicus	74.67	0.00e+00	1254.00
IUUC-Sha-107056	Sarcophilus harrisii	74.84	0.00e+00	1253.00
IUUC-Smo-109240	Selaginella moellendorffii	43.54	2.00e-175	608.00
IUUC-Sar-113301	Sorex araneus	63.27	1.00e-114	407.00
IUUC-Ssc-116040	Sus scrofa	79.92	4.00e-126	444.00
IUUC-Tgu-117127	Taeniopygia guttata	73.40	0.00e+00	1199.00
IUUC-Tru-118663	Takifugu rubripes	73.66	0.00e+00	1231.00
IUUC-Tsy-119207	Tarsius syrichta	65.79	0.00e+00	1065.00
IUUC-Tni-120705	Tetraodon nigroviridis	73.05	0.00e+00	1224.00
IUUC-Tbe-127434	Tupaia belangeri	66.17	0.00e+00	774.00
IUUC-Ttr-128937	Tursiops truncatus	74.80	0.00e+00	1254.00
IUUC-Vpa-130518	Vicugna pacos	71.02	0.00e+00	1150.00
IUUC-Xtr-131879	Xenopus tropicalis	72.03	0.00e+00	1195.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence