iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-098834

Ensembl Protein ID

POPTR_0010s08880.1

UniProt Accession

B9HUN7; B9HUN7_POPTR

Genbank Protein ID

EEF01907.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

CM000346

Gene Name

POPTRDRAFT_566151; POPTR_0010s08880g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0010s08880	POPTR_0010s08880.1	POPTR_0010s08880.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	8.40e-16	59.1	161	258

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt.lt.......................elknsevalkYeDedGDlvtlksDedldkavsl 69
           +vkv+++g+++++++dl+ + ++++L +a+++ +                         l+ se+ + YeD+dGD++ l++D++++++v+ 
   Q: 161  FVKVCMDGAPYLRKVDLKMYKSYQELSDALAKmFSsftmgnygaqgmidfmnesklmdLLNSSEYVPSYEDKDGDWM-LVGDVPWEMFVD- 249
           8*******************************62256699*****************88888***************.************. PP
   S: 70   laskksllrlliqk 83
                s++rl+i+k
   Q: 250  -----SCKRLRIMK 258
           .....********8 PP

Organism

Populus trichocarpa

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MATATVLGTE MADLNYKETE LCLGLPGAVG VKNEVETPNK ATGKRGFAET VDLKLNLQAK 60
EGVMDLNENI KNIASKDKNH LPADTIKDPA KPPAKAQVVG WPPVRSYRKN VLAQKNASEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAGCCCAAC TTATATTATT GAGGTCTCTC TCTCTCTCTC TCTCTCTCTA GCTAGCTTGC 60
AAAACATAGA AGAGGACACA AGAAATAAGA AACAAAGAAA CGAGCAAAAG CTAGCTATCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

pop:POPTR_0010s08880g

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence