iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oga-088812

Ensembl Protein ID

ENSOGAP00000000727.2

UniProt Accession

H0WH93; H0WH93_OTOGA

Genbank Protein ID

ENSOGAP00000000727

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03171153

Gene Name

RNF19B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000000815.2	ENSOGAT00000000815.2	ENSOGAP00000000727.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RBR	2.90e-44	152.0	2	175

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RBR

   S: 27   ClkqylelkikegqvteiscpaaecpekleeseikellveeelykryekllleevveadaalkwcpapdCslvvllekea..eklevece 114
           Cl++yl+l+i+e++ + iscp  ec+e+l++++i+ ll+++ l+++ye+++l++++++d++++wcpapdC ++v++  +a  +kl++e+e
   Q: 2    CLRHYLRLEISESR-VPISCP--ECSERLNPHDIRLLLADPPLMHKYEEFMLRRYLASDPDCRWCPAPDCGYAVIAYGCAscPKLTCERE 88
           **************.9*****..89****************************************************999899******* PP
   S: 115  kcgkefCveCkeewHeglsCkelkeklakteeek......eeaeskelleanskkCpkCkvyiek..negCnhmtCakCkaefCwlC 193
           +c++efC++Ck++wH++++C+++++++a+t + +       ++ +++  ++++k+Cp+C++yi+k  +++CnhmtCa C++efCwlC
   Q: 89   GCQTEFCYHCKQIWHPNQTCDMARQQRAQTLRVRtkhtsgLSYGQESGPADDIKPCPRCSAYIIKmnDGSCNHMTCAVCGCEFCWLC 175
           *****************************99988888888888899999***************997889***************** PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

XCLRHYLRLE ISESRVPISC PECSERLNPH DIRLLLADPP LMHKYEEFML RRYLASDPDC 60
RWCPAPDCGY AVIAYGCASC PKLTCEREGC QTEFCYHCKQ IWHPNQTCDM ARQQRAQTLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

NNCTGCCTCC GCCACTACCT GCGCCTGGAG ATCAGCGAGA GCCGGGTGCC CATCAGCTGC 60
CCGGAGTGCA GCGAGCGACT CAACCCGCAC GACATCCGCC TGCTGCTCGC CGACCCGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR016150--Casein_kin_II_reg-sub_b-sht
IPR031127--E3_UB_ligase_RBR
IPR002867--IBR_dom

Pfam

PF01485--IBR

SMART

SM00647--IBR

Gene Ontology

GO:0005829--C:cytosol
GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding
GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002183	Ailuropoda melanoleuca	94.96	0.00e+00	1046.00
IUUC-Apl-003468	Anas platyrhynchos	90.06	0.00e+00	852.00
IUUC-Aca-004324	Anolis carolinensis	89.43	0.00e+00	932.00
IUUC-Ame-011813	Astyanax mexicanus	66.73	0.00e+00	657.00
IUUC-Bta-013135	Bos taurus	95.95	0.00e+00	1069.00
IUUC-Cja-019264	Callithrix jacchus	87.16	0.00e+00	928.00
IUUC-Cpo-022502	Cavia porcellus	95.43	0.00e+00	970.00
IUUC-Cho-025032	Choloepus hoffmanni	75.36	0.00e+00	738.00
IUUC-Dre-028769	Danio rerio	68.15	0.00e+00	702.00
IUUC-Dor-030551	Dipodomys ordii	96.98	4.00e-119	421.00
IUUC-Ete-033008	Echinops telfairi	82.73	0.00e+00	810.00
IUUC-Eca-033267	Equus caballus	97.32	0.00e+00	936.00
IUUC-Fca-035520	Felis catus	96.75	0.00e+00	930.00
IUUC-Fal-037090	Ficedula albicollis	89.28	0.00e+00	761.00
IUUC-Gga-041229	Gallus gallus	89.47	0.00e+00	743.00
IUUC-Gac-041619	Gasterosteus aculeatus	68.11	0.00e+00	694.00
IUUC-Hsa-045958	Homo sapiens	98.64	0.00e+00	1081.00
IUUC-Itr-048425	Ictidomys tridecemlineatus	96.51	0.00e+00	978.00
IUUC-Lch-049552	Latimeria chalumnae	85.33	0.00e+00	874.00
IUUC-Loc-051738	Lepisosteus oculatus	68.31	0.00e+00	751.00
IUUC-Laf-054252	Loxodonta africana	93.49	0.00e+00	942.00
IUUC-Meu-055920	Macropus eugenii	92.93	0.00e+00	949.00
IUUC-Mga-059587	Meleagris gallopavo	88.63	0.00e+00	796.00
IUUC-Mdo-061985	Monodelphis domestica	93.57	0.00e+00	1030.00
IUUC-Mmu-064262	Mus musculus	95.42	0.00e+00	1050.00
IUUC-Mpu-066101	Mustela putorius furo	96.45	0.00e+00	1090.00
IUUC-Mlu-067347	Myotis lucifugus	97.50	0.00e+00	942.00
IUUC-Ont-071298	Oreochromis niloticus	68.09	0.00e+00	712.00
IUUC-Oan-073219	Ornithorhynchus anatinus	89.08	0.00e+00	867.00
IUUC-Ocu-073792	Oryctolagus cuniculus	95.54	0.00e+00	902.00
IUUC-Ola-086499	Oryzias latipes	69.05	0.00e+00	713.00
IUUC-Oar-090353	Ovis aries	95.00	0.00e+00	986.00
IUUC-Psi-092988	Pelodiscus sinensis	90.06	0.00e+00	844.00
IUUC-Pfo-096268	Poecilia formosa	65.48	0.00e+00	710.00
IUUC-Pca-100597	Procavia capensis	96.54	0.00e+00	918.00
IUUC-Pva-102542	Pteropus vampyrus	84.67	0.00e+00	875.00
IUUC-Sha-106512	Sarcophilus harrisii	93.09	0.00e+00	1003.00
IUUC-Sar-113233	Sorex araneus	95.21	0.00e+00	891.00
IUUC-Ssc-115781	Sus scrofa	96.10	0.00e+00	1108.00
IUUC-Tgu-117384	Taeniopygia guttata	95.68	0.00e+00	774.00
IUUC-Tru-117919	Takifugu rubripes	68.32	0.00e+00	696.00
IUUC-Tsy-119275	Tarsius syrichta	93.61	0.00e+00	915.00
IUUC-Tbe-127335	Tupaia belangeri	99.73	0.00e+00	669.00
IUUC-Ttr-128554	Tursiops truncatus	95.97	0.00e+00	917.00
IUUC-Vpa-130407	Vicugna pacos	89.49	0.00e+00	923.00
IUUC-Xtr-132325	Xenopus tropicalis	85.75	0.00e+00	707.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence