iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Oga-088641

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03148914

Gene Name

USP42

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000003758.2	ENSOGAT00000003764.2	ENSOGAP00000003344.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	8.70e-82	275.0	112	411

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeq 89
           Gl+NlgNtC+ N++LQcL+ +p+l++++l+ ++++++++     +  ++++ +q  +++ +++   +++p  +++ ++++a++f+  +q
   Q: 112  GLQNLGNTCFANAALQCLTYTPPLANYMLShEHSKTCHA-----EGFCMMCIMQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQ 195
           9*****************************445555544.....578****************************************** PP
   S: 90   qDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpg 178
           +Da+Efl++ +d++++++                  l+ +++ + +++ ++++ ++F+g l+s++kcl+c+ vs +++p ld++l+++ 
   Q: 196  EDAHEFLQYTVDAMQKAC------------------LNGSNKLDRHTQATTFVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA 266
           ******************..................3344567789999**************************************** PP
   S: 179  keetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts 267
            +     +++++Le+f+k+e+l+gen+y+c+kckk ++a+k++++++ ++vL+l LkRf    ++    ki k v++p+ Ld++p++++
   Q: 267  AQ-----TVNKALEQFVKPEQLDGENAYKCSKCKKMVTASKRFTIHRSSNVLTLSLKRF----ANFTGGKIAKDVKYPEYLDIRPYMSQ 346
           **.....9***************************************************....668889******************** PP
   S: 268  peekqkekkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           p+ +   + +Y L+av+vH+G +++ GHY++y+k ++g W++++Ds V++++  +vl+   ++aYvlfY r
   Q: 347  PNGE---PIIYVLYAVLVHTGfNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLS---QQAYVLFYIR 411
           9977...8**************************************************...********87 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

MTIVDKNSES SDPSACQNQP GSSEAVSTGD MDASSASWGP VSSLNDVSNH TLSLGPVPGA 60
VVYSSSSVPD KSKQSPQKDQ APGDGIAPPQ KVLFPSEKIC LKWQQTHRVG AGLQNLGNTC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACCATAG TTGACAAAAA TTCTGAATCT TCAGACCCAT CAGCCTGTCA GAATCAGCCT 60
GGCAGTTCTG AGGCAGTCTC AACTGGAGAC ATGGATGCAA GTTCTGCCAG CTGGGGACCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002303	Ailuropoda melanoleuca	76.41	0.00e+00	1549.00
IUUC-Apl-003459	Anas platyrhynchos	45.46	0.00e+00	820.00
IUUC-Aca-004440	Anolis carolinensis	52.65	0.00e+00	1020.00
IUUC-Ago-007836	Ashbya gossypii	26.74	2.00e-35	144.00
IUUC-Ame-011358	Astyanax mexicanus	65.69	0.00e+00	662.00
IUUC-Bta-012803	Bos taurus	71.18	0.00e+00	1707.00
IUUC-Cja-019199	Callithrix jacchus	72.92	0.00e+00	1656.00
IUUC-Cfa-020597	Canis familiaris	77.87	0.00e+00	1793.00
IUUC-Cpo-021945	Cavia porcellus	72.72	0.00e+00	1735.00
IUUC-Csa-023485	Chlorocebus sabaeus	74.06	0.00e+00	1643.00
IUUC-Cho-024575	Choloepus hoffmanni	78.20	0.00e+00	1065.00
IUUC-Dre-028442	Danio rerio	54.10	0.00e+00	646.00
IUUC-Dno-029673	Dasypus novemcinctus	79.49	0.00e+00	1970.00
IUUC-Dor-030518	Dipodomys ordii	65.20	9.00e-134	471.00
IUUC-Ete-033088	Echinops telfairi	60.61	0.00e+00	1039.00
IUUC-Eca-033579	Equus caballus	75.45	0.00e+00	1794.00
IUUC-Eeu-034511	Erinaceus europaeus	54.83	0.00e+00	998.00
IUUC-Fca-035792	Felis catus	73.66	0.00e+00	1628.00
IUUC-Fal-037075	Ficedula albicollis	44.54	0.00e+00	894.00
IUUC-Gga-040504	Gallus gallus	44.78	0.00e+00	854.00
IUUC-Gma-044075	Glycine max	47.88	2.00e-85	310.00
IUUC-Ggo-044798	Gorilla gorilla	69.69	0.00e+00	1405.00
IUUC-Hsa-046072	Homo sapiens	73.83	0.00e+00	1620.00
IUUC-Hvu-047620	Hordeum vulgare	41.96	1.00e-72	268.00
IUUC-Itr-048078	Ictidomys tridecemlineatus	81.20	0.00e+00	2034.00
IUUC-Lch-049867	Latimeria chalumnae	48.78	0.00e+00	975.00
IUUC-Loc-052621	Lepisosteus oculatus	63.33	0.00e+00	696.00
IUUC-Laf-054330	Loxodonta africana	89.63	0.00e+00	1253.00
IUUC-Mcc-054900	Macaca mulatta	93.92	0.00e+00	754.00
IUUC-Meu-056877	Macropus eugenii	53.57	0.00e+00	757.00
IUUC-Mga-059501	Meleagris gallopavo	41.87	0.00e+00	784.00
IUUC-Mvi-060547	Microbotryum violaceum	45.62	5.00e-81	295.00
IUUC-Mmr-060864	Microcebus murinus	87.18	0.00e+00	2145.00
IUUC-Mdo-062395	Monodelphis domestica	64.93	0.00e+00	1599.00
IUUC-Mmu-064236	Mus musculus	69.69	0.00e+00	1605.00
IUUC-Mpu-065822	Mustela putorius furo	79.24	0.00e+00	1849.00
IUUC-Mlu-067091	Myotis lucifugus	72.65	0.00e+00	1671.00
IUUC-Nle-069004	Nomascus leucogenys	73.46	0.00e+00	1644.00
IUUC-Opr-071170	Ochotona princeps	60.68	0.00e+00	1150.00
IUUC-Ont-071832	Oreochromis niloticus	62.09	0.00e+00	659.00
IUUC-Oan-073711	Ornithorhynchus anatinus	59.09	0.00e+00	1346.00
IUUC-Ocu-074596	Oryctolagus cuniculus	93.47	0.00e+00	1016.00
IUUC-Oar-089760	Ovis aries	67.84	0.00e+00	1564.00
IUUC-Ptr-091445	Pan troglodytes	74.06	0.00e+00	1643.00
IUUC-Pan-092484	Papio anubis	73.98	0.00e+00	1577.00
IUUC-Psi-093277	Pelodiscus sinensis	57.61	0.00e+00	1214.00
IUUC-Pma-094651	Petromyzon marinus	37.93	8.00e-56	210.00
IUUC-Pfo-096469	Poecilia formosa	66.40	0.00e+00	659.00
IUUC-Pab-097794	Pongo abelii	72.72	0.00e+00	1520.00
IUUC-Pva-103238	Pteropus vampyrus	70.56	0.00e+00	1566.00
IUUC-Rno-105068	Rattus norvegicus	69.96	0.00e+00	1613.00
IUUC-Sha-106713	Sarcophilus harrisii	65.57	0.00e+00	1632.00
IUUC-Sit-110536	Setaria italica	36.64	4.00e-81	296.00
IUUC-Sar-113340	Sorex araneus	81.74	0.00e+00	1084.00
IUUC-Tgu-117149	Taeniopygia guttata	45.45	0.00e+00	902.00
IUUC-Tru-117776	Takifugu rubripes	62.99	5.00e-177	614.00
IUUC-Tsy-118974	Tarsius syrichta	77.67	0.00e+00	1905.00
IUUC-Tni-120774	Tetraodon nigroviridis	68.22	1.00e-174	605.00
IUUC-Tbe-128006	Tupaia belangeri	73.43	2.00e-159	556.00
IUUC-Ttr-128764	Tursiops truncatus	65.00	0.00e+00	1467.00
IUUC-Xtr-132544	Xenopus tropicalis	57.14	0.00e+00	652.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence