iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pab-098075

Ensembl Protein ID

ENSPPYP00000010923.2

UniProt Accession

H2NY45; H2NY45_PONAB

Genbank Protein ID

ENSPPYP00000010923

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABGA01204628

Gene Name

UPF1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPPYG00000009752.2	ENSPPYT00000011348.2	ENSPPYP00000010923.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/Other	52.87	0.00e+00	882.00	IUUC-Sce-106206

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Pongo abelii

Protein Sequence
(Fasta)

MSVEAYGPSS QTLTFLDTEE AELLGADTQG SEFEFTDFTL PSQTQTPPGG PGGPGGGGAG 60
GPGGAGAGAA AGQLDAQVGP EGILQNGAVD DSVAKTSQLL AELNFEEDEE DTYYTKDLPI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGCCGGCGT CGGGCTCGCG CACGCGCACG GCGACGGCGG CGGTGGCGGC AGTTCCTGCT 60
CTAGGCTGCG AGCGGCGGGC GGCTTCGAGG GGAGCTGAGG CGCGGAGGGG CTCGGCGGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006935--Helicase/UvrB_N
IPR027417--P-loop_NTPase
IPR018999--RNA-helicase_UPF1_UPF2-interct

Pfam

PF04851--ResIII
PF09416--UPF1_Zn_bind

Gene Ontology

GO:0000785--C:chromatin
GO:0005737--C:cytoplasm
GO:0035145--C:exon-exon junction complex
GO:0000784--C:nuclear chromosome, telomeric region
GO:0005654--C:nucleoplasm
GO:0044530--C:supraspliceosomal complex
GO:0005524--F:ATP binding
GO:0004004--F:ATP-dependent RNA helicase activity
GO:0003682--F:chromatin binding
GO:0003723--F:RNA binding
GO:0042162--F:telomeric DNA binding
GO:0008270--F:zinc ion binding
GO:0061158--P:3'-UTR-mediated mRNA destabilization
GO:0071347--P:cellular response to interleukin-1
GO:0071222--P:cellular response to lipopolysaccharide
GO:0006281--P:DNA repair
GO:0009048--P:dosage compensation by inactivation of X chromosome
GO:0071044--P:histone mRNA catabolic process
GO:0000294--P:nuclear-transcribed mRNA catabolic process, endonucleolytic cleavage-dependent decay
GO:0000184--P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0061014--P:positive regulation of mRNA catabolic process
GO:0006449--P:regulation of translational termination
GO:0032201--P:telomere maintenance via semi-conservative replication

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000680	Aegilops tauschii	66.79	0.00e+00	1073.00
IUUC-Aml-002008	Ailuropoda melanoleuca	91.97	0.00e+00	1977.00
IUUC-Atr-002632	Amborella trichopoda	63.01	0.00e+00	1159.00
IUUC-Apl-003997	Anas platyrhynchos	91.15	0.00e+00	1857.00
IUUC-Aca-004322	Anolis carolinensis	29.54	4.00e-44	173.00
IUUC-Aly-006521	Arabidopsis lyrata	67.30	0.00e+00	1144.00
IUUC-Ath-007059	Arabidopsis thaliana	67.06	0.00e+00	1142.00
IUUC-Ago-007801	Ashbya gossypii	52.26	0.00e+00	861.00
IUUC-Acl-008312	Aspergillus clavatus	64.79	0.00e+00	1090.00
IUUC-Afl-008429	Aspergillus flavus	64.09	0.00e+00	1092.00
IUUC-Afu-009092	Aspergillus fumigatus	60.31	0.00e+00	1089.00
IUUC-Ani-009317	Aspergillus nidulans	64.79	0.00e+00	1093.00
IUUC-Ang-009783	Aspergillus niger	59.19	0.00e+00	1090.00
IUUC-Aor-010178	Aspergillus oryzae	64.09	0.00e+00	1092.00
IUUC-Ate-010294	Aspergillus terreus	57.24	0.00e+00	1099.00
IUUC-Ame-010774	Astyanax mexicanus	67.82	0.00e+00	1063.00
IUUC-Bgr-012293	Blumeria graminis	63.28	0.00e+00	1087.00
IUUC-Bta-012382	Bos taurus	92.21	0.00e+00	1985.00
IUUC-Bci-013937	Botrytis cinerea	63.53	0.00e+00	1081.00
IUUC-Bdi-014612	Brachypodium distachyon	59.80	0.00e+00	1157.00
IUUC-Bol-015145	Brassica oleracea	66.27	0.00e+00	1134.00
IUUC-Bra-017370	Brassica rapa	64.85	0.00e+00	1098.00
IUUC-Cel-018240	Caenorhabditis elegans	54.82	0.00e+00	888.00
IUUC-Cja-019892	Callithrix jacchus	92.24	0.00e+00	1880.00
IUUC-Cfa-020700	Canis familiaris	93.36	0.00e+00	1989.00
IUUC-Cpo-021510	Cavia porcellus	92.12	0.00e+00	1995.00
IUUC-Cre-022731	Chlamydomonas reinhardtii	55.10	0.00e+00	890.00
IUUC-Csa-023665	Chlorocebus sabaeus	92.65	0.00e+00	1963.00
IUUC-Cin-025798	Ciona intestinalis	78.44	0.00e+00	1226.00
IUUC-Csv-025901	Ciona savignyi	68.43	0.00e+00	1471.00
IUUC-Cgl-026653	Colletotrichum gloeosporioides	60.76	0.00e+00	1058.00
IUUC-Cne-027014	Cryptococcus neoformans	59.98	0.00e+00	1100.00
IUUC-Dre-028705	Danio rerio	86.04	0.00e+00	1879.00
IUUC-Dor-030369	Dipodomys ordii	90.11	0.00e+00	1827.00
IUUC-Dme-031767	Drosophila melanogaster	66.80	0.00e+00	1287.00
IUUC-Ete-032800	Echinops telfairi	31.19	4.00e-45	176.00
IUUC-Eca-033840	Equus caballus	91.91	0.00e+00	1863.00
IUUC-Fca-035466	Felis catus	92.44	0.00e+00	1891.00
IUUC-Fal-037548	Ficedula albicollis	90.14	0.00e+00	1817.00
IUUC-Fox-038023	Fusarium oxysporum	55.20	0.00e+00	1045.00
IUUC-Gmo-039285	Gadus morhua	86.11	0.00e+00	1831.00
IUUC-Ggr-039810	Gaeumannomyces graminis	62.45	0.00e+00	1077.00
IUUC-Gga-040972	Gallus gallus	89.56	0.00e+00	1915.00
IUUC-Gac-042075	Gasterosteus aculeatus	85.98	0.00e+00	1852.00
IUUC-Gma-042713	Glycine max	67.90	0.00e+00	1187.00
IUUC-Ggo-045398	Gorilla gorilla	92.20	0.00e+00	1868.00
IUUC-Hsa-046152	Homo sapiens	92.74	0.00e+00	1963.00
IUUC-Hvu-047555	Hordeum vulgare	71.40	0.00e+00	728.00
IUUC-Itr-048247	Ictidomys tridecemlineatus	93.53	0.00e+00	1850.00
IUUC-Kpa-049205	Komagataella pastoris	45.91	0.00e+00	686.00
IUUC-Lch-049587	Latimeria chalumnae	88.24	0.00e+00	1144.00
IUUC-Lpe-051059	Leersia perrieri	68.62	0.00e+00	1160.00
IUUC-Loc-051911	Lepisosteus oculatus	87.53	0.00e+00	1867.00
IUUC-Lma-053007	Leptosphaeria maculans	62.55	0.00e+00	1060.00
IUUC-Laf-054234	Loxodonta africana	92.12	0.00e+00	1964.00
IUUC-Mcc-054762	Macaca mulatta	92.65	0.00e+00	1992.00
IUUC-Meu-056677	Macropus eugenii	84.84	0.00e+00	781.00
IUUC-Mor-057147	Magnaporthe oryzae	63.02	0.00e+00	1070.00
IUUC-Mpo-057314	Magnaporthe poae	62.45	0.00e+00	1078.00
IUUC-Mtr-058329	Medicago truncatula	59.33	0.00e+00	1190.00
IUUC-Mla-059094	Melampsora laricipopulina	66.13	0.00e+00	676.00
IUUC-Mga-060126	Meleagris gallopavo	90.68	0.00e+00	1837.00
IUUC-Mvi-060373	Microbotryum violaceum	64.68	0.00e+00	1159.00
IUUC-Mmr-060628	Microcebus murinus	92.29	0.00e+00	1986.00
IUUC-Mdo-061858	Monodelphis domestica	91.25	0.00e+00	1850.00
IUUC-Mmu-064116	Mus musculus	90.79	0.00e+00	1943.00
IUUC-Mac-065136	Musa acuminata	67.06	0.00e+00	1152.00
IUUC-Mpu-066463	Mustela putorius furo	92.39	0.00e+00	1957.00
IUUC-Mlu-068098	Myotis lucifugus	92.01	0.00e+00	1945.00
IUUC-Nfi-068370	Neosartorya fischeri	64.18	0.00e+00	1089.00
IUUC-Ncr-068792	Neurospora crassa	58.25	0.00e+00	1062.00
IUUC-Nle-070102	Nomascus leucogenys	92.11	0.00e+00	1862.00
IUUC-Opr-070620	Ochotona princeps	85.82	0.00e+00	1706.00
IUUC-Ont-072685	Oreochromis niloticus	86.46	0.00e+00	1828.00
IUUC-Oan-073665	Ornithorhynchus anatinus	90.28	0.00e+00	1959.00
IUUC-Ocu-074154	Oryctolagus cuniculus	30.35	4.00e-46	180.00
IUUC-Oba-075075	Oryza barthii	58.67	0.00e+00	907.00
IUUC-Obr-076183	Oryza brachyantha	62.12	0.00e+00	984.00
IUUC-Ogl-077691	Oryza glaberrima	63.97	0.00e+00	1161.00
IUUC-Ogu-078423	Oryza glumaepatula	63.97	0.00e+00	1161.00
IUUC-Oin-080107	Oryza indica	63.97	0.00e+00	1161.00
IUUC-Olo-080269	Oryza longistaminata	63.28	0.00e+00	1087.00
IUUC-Ome-081779	Oryza meridionalis	64.08	0.00e+00	1161.00
IUUC-Oni-082366	Oryza nivara	63.97	0.00e+00	1160.00
IUUC-Opu-083958	Oryza punctata	60.98	0.00e+00	1162.00
IUUC-Oru-084182	Oryza rufipogon	63.97	0.00e+00	1160.00
IUUC-Osa-085285	Oryza sativa	63.80	0.00e+00	1160.00
IUUC-Ola-086954	Oryzias latipes	84.07	0.00e+00	1809.00
IUUC-Olu-087685	Ostreococcus lucimarinus	53.71	0.00e+00	852.00
IUUC-Oga-088591	Otolemur garnettii	92.65	0.00e+00	1961.00
IUUC-Oar-089417	Ovis aries	90.42	0.00e+00	1838.00
IUUC-Ptr-091510	Pan troglodytes	92.94	0.00e+00	1723.00
IUUC-Pan-091886	Papio anubis	92.74	0.00e+00	1963.00
IUUC-Psi-093755	Pelodiscus sinensis	87.97	0.00e+00	1260.00
IUUC-Pma-094470	Petromyzon marinus	81.05	0.00e+00	1750.00
IUUC-Pno-094963	Phaeosphaeria nodorum	62.67	0.00e+00	1059.00
IUUC-Ppa-095479	Physcomitrella patens	68.04	0.00e+00	1189.00
IUUC-Pfo-097456	Poecilia formosa	85.84	0.00e+00	1833.00
IUUC-Pop-099557	Populus trichocarpa	58.45	0.00e+00	1179.00
IUUC-Pca-100717	Procavia capensis	94.85	5.00e-157	548.00
IUUC-Ppe-101675	Prunus persica	59.03	0.00e+00	1188.00
IUUC-Pva-103029	Pteropus vampyrus	97.56	0.00e+00	1379.00
IUUC-Pgr-103318	Puccinia graminis	63.30	0.00e+00	1102.00
IUUC-Ptt-103956	Puccinia triticina	62.47	0.00e+00	1103.00
IUUC-Pte-104399	Pyrenophora teres	63.04	0.00e+00	1066.00
IUUC-Pyt-104749	Pyrenophora triticirepentis	62.79	0.00e+00	1063.00
IUUC-Rno-105784	Rattus norvegicus	91.59	0.00e+00	1972.00
IUUC-Sce-106206	Saccharomyces cerevisiae	52.86	0.00e+00	850.00
IUUC-Sha-106566	Sarcophilus harrisii	92.12	0.00e+00	1883.00
IUUC-Sja-107721	Schizosaccharomyces japonicus	58.19	0.00e+00	993.00
IUUC-Spo-108258	Schizosaccharomyces pombe	55.69	0.00e+00	957.00
IUUC-Ssl-108640	Sclerotinia sclerotiorum	64.36	0.00e+00	986.00
IUUC-Sit-109760	Setaria italica	59.61	0.00e+00	1158.00
IUUC-Sly-111807	Solanum lycopersicum	68.53	0.00e+00	1191.00
IUUC-Stu-112869	Solanum tuberosum	63.44	0.00e+00	1182.00
IUUC-Sar-112950	Sorex araneus	34.03	2.00e-36	147.00
IUUC-Sbi-114863	Sorghum bicolor	59.74	0.00e+00	1158.00
IUUC-Sre-115092	Sporisorium reilianum	62.09	0.00e+00	1150.00
IUUC-Tgu-117214	Taeniopygia guttata	84.82	0.00e+00	1526.00
IUUC-Tru-118386	Takifugu rubripes	81.42	0.00e+00	1779.00
IUUC-Tsy-119550	Tarsius syrichta	95.59	4.00e-164	572.00
IUUC-Tni-120212	Tetraodon nigroviridis	84.45	0.00e+00	1755.00
IUUC-Tca-121353	Theobroma cacao	67.41	0.00e+00	1182.00
IUUC-Tre-122245	Trichoderma reesei	33.83	2.00e-28	122.00
IUUC-Tvi-122452	Trichoderma virens	54.53	0.00e+00	1021.00
IUUC-Tae-123692	Triticum aestivum	68.67	0.00e+00	1154.00
IUUC-Tur-126770	Triticum urartu	57.13	0.00e+00	972.00
IUUC-Tme-126956	Tuber melanosporum	60.50	0.00e+00	1100.00
IUUC-Tbe-127873	Tupaia belangeri	32.13	1.00e-40	161.00
IUUC-Ttr-128212	Tursiops truncatus	87.52	0.00e+00	1830.00
IUUC-Uma-129327	Ustilago maydis	65.82	0.00e+00	1147.00
IUUC-Vda-129858	Verticillium dahliae	61.49	0.00e+00	1032.00
IUUC-Vpa-130743	Vicugna pacos	31.39	6.00e-42	166.00
IUUC-Vvi-131222	Vitis vinifera	68.01	0.00e+00	1164.00
IUUC-Xtr-131800	Xenopus tropicalis	79.55	0.00e+00	1621.00
IUUC-Xma-133216	Xiphophorus maculatus	85.66	0.00e+00	1829.00
IUUC-Yli-134482	Yarrowia lipolytica	50.00	0.00e+00	790.00
IUUC-Zma-134802	Zea mays	60.70	0.00e+00	1163.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence