iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Mlu-067918

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAPE02049471

Gene Name

SYVN1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMLUG00000023783.1	ENSMLUT00000024634.1	ENSMLUP00000018950.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.00e-08	34.1	268	307

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e++ +g + l C+H+fh++Cl  w       +++++CP+Cr
   Q: 268  CIICREEMVTGAKKLLCNHIFHTSCLRSW------FQRQQTCPTCR 307
           ********99999999*************......**********8 PP

Organism

Myotis lucifugus

Protein Sequence
(Fasta)

XLKHHFYPTV VSLTKSSPRM PVLYIQAFVL VFLLGKVMGK VFFGQLRAAE MEHLLERSWY 60
AVTETCLAFT VFRDDFSPRF VALFTLLLFL KCFHWLAEDR VDFMERSPNI SWLFHCRIVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

NNCCTCAAGC ACCATTTCTA CCCCACGGTG GTGTCCCTGA CCAAGTCCAG CCCCAGAATG 60
CCCGTGAGTG GAGGGCGGGG GGAGGAACTC CGGGGGGGGG GGGGAGCGGG GAGCGGGAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR032832--E3_lig_synoviolin/Hrd1
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:0000839--C:Hrd1p ubiquitin ligase ERAD-L complex
GO:0016021--C:integral component of membrane
GO:0005654--C:nucleoplasm
GO:0005790--C:smooth endoplasmic reticulum
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0008270--F:zinc ion binding
GO:1902236--P:negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway
GO:0070936--P:protein K48-linked ubiquitination
GO:0018279--P:protein N-linked glycosylation via asparagine
GO:0050821--P:protein stabilization
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0030970--P:retrograde protein transport, ER to cytosol

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000344	Aegilops tauschii	38.85	4.00e-49	189.00
IUUC-Aml-001539	Ailuropoda melanoleuca	97.45	0.00e+00	642.00
IUUC-Atr-002892	Amborella trichopoda	45.48	1.00e-72	267.00
IUUC-Apl-004003	Anas platyrhynchos	94.92	3.00e-63	233.00
IUUC-Aca-004799	Anolis carolinensis	96.23	0.00e+00	640.00
IUUC-Aly-006352	Arabidopsis lyrata	44.52	8.00e-71	261.00
IUUC-Ath-006773	Arabidopsis thaliana	44.52	1.00e-70	260.00
IUUC-Ago-007894	Ashbya gossypii	24.84	8.00e-17	82.00
IUUC-Acl-008041	Aspergillus clavatus	30.47	8.00e-52	198.00
IUUC-Afl-008427	Aspergillus flavus	31.28	3.00e-49	190.00
IUUC-Afu-009023	Aspergillus fumigatus	31.01	1.00e-53	204.00
IUUC-Ani-009133	Aspergillus nidulans	31.30	3.00e-53	203.00
IUUC-Ang-009612	Aspergillus niger	34.63	5.00e-53	202.00
IUUC-Aor-010045	Aspergillus oryzae	30.71	8.00e-52	198.00
IUUC-Ate-010533	Aspergillus terreus	31.83	1.00e-51	197.00
IUUC-Ame-011083	Astyanax mexicanus	92.01	3.00e-174	605.00
IUUC-Bgr-012122	Blumeria graminis	27.78	1.00e-41	165.00
IUUC-Bta-013375	Bos taurus	97.75	0.00e+00	638.00
IUUC-Bci-013675	Botrytis cinerea	37.25	3.00e-22	100.00
IUUC-Bdi-015070	Brachypodium distachyon	43.23	9.00e-65	241.00
IUUC-Bol-015674	Brassica oleracea	44.19	2.00e-70	259.00
IUUC-Bra-017516	Brassica rapa	43.40	2.00e-69	256.00
IUUC-Cel-018422	Caenorhabditis elegans	57.88	2.00e-109	389.00
IUUC-Cja-019779	Callithrix jacchus	94.92	4.00e-175	607.00
IUUC-Cfa-020189	Canis familiaris	97.75	0.00e+00	639.00
IUUC-Cpo-022209	Cavia porcellus	97.45	0.00e+00	638.00
IUUC-Cre-022743	Chlamydomonas reinhardtii	38.26	1.00e-61	229.00
IUUC-Csa-023571	Chlorocebus sabaeus	97.75	0.00e+00	637.00
IUUC-Cho-024889	Choloepus hoffmanni	86.58	3.00e-160	558.00
IUUC-Csv-026160	Ciona savignyi	61.11	2.00e-113	402.00
IUUC-Cne-027002	Cryptococcus neoformans	41.94	9.00e-75	275.00
IUUC-Cme-027285	Cyanidioschyzon merolae	38.97	5.00e-50	192.00
IUUC-Dre-027999	Danio rerio	91.69	5.00e-176	610.00
IUUC-Dno-029250	Dasypus novemcinctus	97.77	0.00e+00	643.00
IUUC-Dor-030718	Dipodomys ordii	94.23	8.00e-178	617.00
IUUC-Dse-031498	Dothistroma septosporum	34.76	3.00e-26	113.00
IUUC-Dme-031969	Drosophila melanogaster	66.77	6.00e-134	471.00
IUUC-Ete-032592	Echinops telfairi	98.46	2.00e-31	129.00
IUUC-Eca-033258	Equus caballus	97.77	0.00e+00	642.00
IUUC-Fca-035980	Felis catus	97.44	0.00e+00	638.00
IUUC-Fal-037554	Ficedula albicollis	66.79	8.00e-87	313.00
IUUC-Fox-037902	Fusarium oxysporum	29.97	5.00e-45	176.00
IUUC-Fso-038418	Fusarium solani	30.59	6.00e-42	166.00
IUUC-Gmo-039288	Gadus morhua	91.12	1.00e-167	582.00
IUUC-Ggr-040076	Gaeumannomyces graminis	30.34	2.00e-43	171.00
IUUC-Gga-040347	Gallus gallus	92.44	3.00e-63	233.00
IUUC-Gac-042347	Gasterosteus aculeatus	91.37	2.00e-174	605.00
IUUC-Gma-044123	Glycine max	43.60	1.00e-69	257.00
IUUC-Ggo-044858	Gorilla gorilla	97.76	0.00e+00	640.00
IUUC-Hsa-046412	Homo sapiens	97.77	0.00e+00	642.00
IUUC-Hvu-047279	Hordeum vulgare	43.55	8.00e-66	244.00
IUUC-Itr-048924	Ictidomys tridecemlineatus	97.75	0.00e+00	636.00
IUUC-Kpa-049117	Komagataella pastoris	29.22	5.00e-31	129.00
IUUC-Lch-049533	Latimeria chalumnae	45.37	3.00e-59	222.00
IUUC-Lpe-051229	Leersia perrieri	32.41	2.00e-30	126.00
IUUC-Loc-052843	Lepisosteus oculatus	91.67	6.00e-119	419.00
IUUC-Lma-052997	Leptosphaeria maculans	32.80	3.00e-55	209.00
IUUC-Laf-053482	Loxodonta africana	97.75	0.00e+00	636.00
IUUC-Mcc-055075	Macaca mulatta	97.77	0.00e+00	643.00
IUUC-Meu-056683	Macropus eugenii	96.58	6.00e-148	517.00
IUUC-Mor-057082	Magnaporthe oryzae	30.42	1.00e-41	164.00
IUUC-Mpo-057573	Magnaporthe poae	31.18	8.00e-44	171.00
IUUC-Mtr-058601	Medicago truncatula	45.16	8.00e-75	274.00
IUUC-Mla-059168	Melampsora laricipopulina	41.37	2.00e-73	270.00
IUUC-Mga-059510	Meleagris gallopavo	96.39	2.00e-45	175.00
IUUC-Mvi-060515	Microbotryum violaceum	41.00	2.00e-62	234.00
IUUC-Mmr-060922	Microcebus murinus	97.76	0.00e+00	639.00
IUUC-Mdo-062491	Monodelphis domestica	96.17	5.00e-177	614.00
IUUC-Mmu-063770	Mus musculus	97.76	0.00e+00	638.00
IUUC-Mac-064789	Musa acuminata	45.16	7.00e-76	278.00
IUUC-Mpu-066107	Mustela putorius furo	97.48	0.00e+00	646.00
IUUC-Nfi-068389	Neosartorya fischeri	30.75	3.00e-53	203.00
IUUC-Ncr-068742	Neurospora crassa	31.70	1.00e-46	181.00
IUUC-Nle-069139	Nomascus leucogenys	97.77	0.00e+00	642.00
IUUC-Opr-070898	Ochotona princeps	97.60	7.00e-122	431.00
IUUC-Ont-071991	Oreochromis niloticus	89.71	2.00e-173	602.00
IUUC-Ocu-074065	Oryctolagus cuniculus	96.81	0.00e+00	634.00
IUUC-Oba-075221	Oryza barthii	41.94	3.00e-63	235.00
IUUC-Obr-076914	Oryza brachyantha	45.13	7.00e-63	234.00
IUUC-Ogu-078124	Oryza glumaepatula	41.94	4.00e-63	235.00
IUUC-Oin-080013	Oryza indica	40.13	1.00e-59	223.00
IUUC-Olo-080247	Oryza longistaminata	40.00	2.00e-57	216.00
IUUC-Ome-081769	Oryza meridionalis	42.58	6.00e-66	244.00
IUUC-Oni-082946	Oryza nivara	41.94	3.00e-63	236.00
IUUC-Opu-083268	Oryza punctata	36.14	3.00e-46	179.00
IUUC-Oru-085114	Oryza rufipogon	41.94	4.00e-63	235.00
IUUC-Osa-085829	Oryza sativa	42.58	5.00e-66	245.00
IUUC-Ola-087449	Oryzias latipes	91.64	2.00e-174	605.00
IUUC-Olu-087894	Ostreococcus lucimarinus	41.27	1.00e-66	246.00
IUUC-Oga-089036	Otolemur garnettii	97.75	0.00e+00	637.00
IUUC-Oar-089715	Ovis aries	97.77	0.00e+00	642.00
IUUC-Ptr-091000	Pan troglodytes	97.75	0.00e+00	635.00
IUUC-Pan-092187	Papio anubis	97.77	0.00e+00	642.00
IUUC-Psi-093377	Pelodiscus sinensis	95.54	4.00e-173	601.00
IUUC-Pma-094759	Petromyzon marinus	90.85	1.00e-77	283.00
IUUC-Pno-094883	Phaeosphaeria nodorum	32.50	1.00e-52	201.00
IUUC-Ppa-095684	Physcomitrella patens	44.52	2.00e-65	243.00
IUUC-Pfo-096861	Poecilia formosa	91.05	1.00e-170	592.00
IUUC-Pab-098030	Pongo abelii	97.77	0.00e+00	642.00
IUUC-Pop-099245	Populus trichocarpa	44.12	2.00e-75	276.00
IUUC-Pca-100191	Procavia capensis	93.71	7.00e-177	613.00
IUUC-Ppe-101829	Prunus persica	44.44	2.00e-74	273.00
IUUC-Pva-102689	Pteropus vampyrus	97.45	0.00e+00	643.00
IUUC-Pgr-103286	Puccinia graminis	37.86	5.00e-71	262.00
IUUC-Ptt-103919	Puccinia triticina	38.33	6.00e-70	258.00
IUUC-Pte-104372	Pyrenophora teres	33.33	3.00e-57	216.00
IUUC-Pyt-104456	Pyrenophora triticirepentis	33.24	5.00e-55	209.00
IUUC-Rno-105723	Rattus norvegicus	97.75	0.00e+00	636.00
IUUC-Sce-106348	Saccharomyces cerevisiae	25.96	9.00e-23	101.00
IUUC-Sha-107300	Sarcophilus harrisii	95.90	4.00e-151	527.00
IUUC-Sja-107685	Schizosaccharomyces japonicus	27.52	2.00e-36	146.00
IUUC-Spo-108308	Schizosaccharomyces pombe	29.43	1.00e-36	147.00
IUUC-Ssl-108558	Sclerotinia sclerotiorum	37.25	2.00e-22	101.00
IUUC-Smo-109123	Selaginella moellendorffii	45.83	2.00e-70	259.00
IUUC-Sit-110276	Setaria italica	43.87	2.00e-66	246.00
IUUC-Sly-111819	Solanum lycopersicum	46.43	7.00e-72	264.00
IUUC-Stu-112048	Solanum tuberosum	43.55	2.00e-70	259.00
IUUC-Sbi-114027	Sorghum bicolor	42.90	4.00e-73	268.00
IUUC-Sre-115212	Sporisorium reilianum	37.16	7.00e-61	228.00
IUUC-Ssc-116323	Sus scrofa	97.43	0.00e+00	634.00
IUUC-Tgu-117156	Taeniopygia guttata	93.51	5.00e-39	151.00
IUUC-Tru-118045	Takifugu rubripes	90.35	2.00e-170	592.00
IUUC-Tsy-118823	Tarsius syrichta	83.05	6.00e-141	493.00
IUUC-Tni-120106	Tetraodon nigroviridis	90.51	3.00e-128	452.00
IUUC-Tca-121462	Theobroma cacao	45.69	7.00e-74	271.00
IUUC-Tre-122204	Trichoderma reesei	38.41	2.00e-25	111.00
IUUC-Tvi-122550	Trichoderma virens	29.82	2.00e-39	157.00
IUUC-Tae-125239	Triticum aestivum	44.19	1.00e-68	253.00
IUUC-Tur-126538	Triticum urartu	38.85	4.00e-49	189.00
IUUC-Tme-127197	Tuber melanosporum	40.96	2.00e-62	234.00
IUUC-Tbe-127385	Tupaia belangeri	87.53	3.00e-164	571.00
IUUC-Ttr-128795	Tursiops truncatus	97.76	0.00e+00	641.00
IUUC-Uma-129401	Ustilago maydis	35.65	2.00e-50	194.00
IUUC-Vda-129968	Verticillium dahliae	29.32	2.00e-39	157.00
IUUC-Vvi-130944	Vitis vinifera	47.06	4.00e-74	271.00
IUUC-Xtr-131884	Xenopus tropicalis	92.68	9.00e-173	600.00
IUUC-Xma-133488	Xiphophorus maculatus	91.05	2.00e-171	595.00
IUUC-Yli-134552	Yarrowia lipolytica	26.44	2.00e-35	143.00
IUUC-Zma-135530	Zea mays	43.27	2.00e-65	243.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence