iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC	RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/Other	86.67	0.00e+00	1174.00	IUUC-Hsa-046947

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MEGAMAVRVT AAHTAEARAE AGHEAGEGGV AAAAALSNGG FLGLPAPFSE EDEDDVHRCG 60
RCQVEFTALE DFVQHKIQKT CHRAPQEALP TTSAATSLLG QEVVPTAAEE GPEEPITVAH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCGCGCTGG AGGCTCAAAG AGCTAAGCTC CACCTCTACT GACGCGCTAG ACCACAACCC 60
GTAGCCCTGC CCCTTTACCT GTCCATCAAA CTCGTTCTTG TCCCGCCCCC TGCCTGTAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004039--Rubredoxin-type_fold
IPR013087--Znf_C2H2_type

PROSITE

PS00028--ZINC_FINGER_C2H2_1
PS50157--ZINC_FINGER_C2H2_2

SMART

SM00355--ZnF_C2H2

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0005819--C:spindle
GO:0035497--F:cAMP response element binding
GO:0046872--F:metal ion binding
GO:0000977--F:RNA polymerase II regulatory region sequence-specific DNA binding
GO:0006260--P:DNA replication
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0010564--P:regulation of cell cycle process
GO:0009794--P:regulation of mitotic cell cycle, embryonic

KEGG

rno:681359

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001466	Ailuropoda melanoleuca	84.78	0.00e+00	1078.00
IUUC-Apl-004190	Anas platyrhynchos	65.55	0.00e+00	909.00
IUUC-Aca-005100	Anolis carolinensis	60.32	0.00e+00	801.00
IUUC-Ame-010704	Astyanax mexicanus	56.75	7.00e-111	394.00
IUUC-Bta-013540	Bos taurus	87.23	0.00e+00	1161.00
IUUC-Cja-018918	Callithrix jacchus	85.48	0.00e+00	1138.00
IUUC-Cfa-020601	Canis familiaris	87.56	0.00e+00	647.00
IUUC-Cpo-021573	Cavia porcellus	89.78	0.00e+00	1226.00
IUUC-Csa-023729	Chlorocebus sabaeus	86.51	0.00e+00	1113.00
IUUC-Dre-028803	Danio rerio	44.79	2.00e-146	513.00
IUUC-Dno-030072	Dasypus novemcinctus	86.97	2.00e-174	606.00
IUUC-Dor-030640	Dipodomys ordii	85.25	0.00e+00	1076.00
IUUC-Eca-034223	Equus caballus	89.66	0.00e+00	1135.00
IUUC-Fca-036268	Felis catus	83.02	0.00e+00	1060.00
IUUC-Fal-037359	Ficedula albicollis	64.81	0.00e+00	786.00
IUUC-Gmo-039016	Gadus morhua	47.13	2.00e-142	499.00
IUUC-Gga-040305	Gallus gallus	65.79	0.00e+00	897.00
IUUC-Gac-042016	Gasterosteus aculeatus	45.34	2.00e-155	542.00
IUUC-Ggo-044459	Gorilla gorilla	86.77	0.00e+00	1080.00
IUUC-Hsa-046947	Homo sapiens	86.26	0.00e+00	1074.00
IUUC-Itr-048641	Ictidomys tridecemlineatus	90.11	0.00e+00	1134.00
IUUC-Lch-049557	Latimeria chalumnae	44.28	6.00e-155	541.00
IUUC-Loc-052894	Lepisosteus oculatus	50.20	2.00e-178	619.00
IUUC-Laf-053791	Loxodonta africana	83.06	0.00e+00	1113.00
IUUC-Mcc-054901	Macaca mulatta	86.39	0.00e+00	1102.00
IUUC-Meu-056299	Macropus eugenii	70.83	0.00e+00	926.00
IUUC-Mga-059323	Meleagris gallopavo	65.68	0.00e+00	922.00
IUUC-Mmr-061422	Microcebus murinus	89.15	0.00e+00	1136.00
IUUC-Mdo-061906	Monodelphis domestica	70.16	0.00e+00	949.00
IUUC-Mmu-064422	Mus musculus	96.39	0.00e+00	1286.00
IUUC-Mpu-066440	Mustela putorius furo	87.14	0.00e+00	1078.00
IUUC-Mlu-067352	Myotis lucifugus	86.84	0.00e+00	1120.00
IUUC-Nle-069201	Nomascus leucogenys	88.27	7.00e-175	607.00
IUUC-Opr-071166	Ochotona princeps	84.86	0.00e+00	1070.00
IUUC-Ont-071370	Oreochromis niloticus	45.75	5.00e-148	518.00
IUUC-Oan-072749	Ornithorhynchus anatinus	56.31	0.00e+00	654.00
IUUC-Ocu-074254	Oryctolagus cuniculus	87.84	0.00e+00	1150.00
IUUC-Ola-086897	Oryzias latipes	46.10	2.00e-156	546.00
IUUC-Olu-087701	Ostreococcus lucimarinus	35.29	2.00e-05	45.10
IUUC-Oga-089179	Otolemur garnettii	87.71	0.00e+00	929.00
IUUC-Oar-090290	Ovis aries	74.77	0.00e+00	1052.00
IUUC-Ptr-091531	Pan troglodytes	84.24	0.00e+00	1019.00
IUUC-Pan-091839	Papio anubis	86.39	0.00e+00	1102.00
IUUC-Psi-093276	Pelodiscus sinensis	67.18	0.00e+00	741.00
IUUC-Pfo-096039	Poecilia formosa	49.06	7.00e-150	524.00
IUUC-Pca-100262	Procavia capensis	79.65	0.00e+00	1017.00
IUUC-Pva-102678	Pteropus vampyrus	86.11	0.00e+00	1097.00
IUUC-Sha-107571	Sarcophilus harrisii	70.69	0.00e+00	915.00
IUUC-Ssc-115849	Sus scrofa	88.47	0.00e+00	1088.00
IUUC-Tgu-117296	Taeniopygia guttata	66.01	0.00e+00	855.00
IUUC-Tru-118085	Takifugu rubripes	56.76	7.00e-102	365.00
IUUC-Tni-119719	Tetraodon nigroviridis	46.31	7.00e-163	567.00
IUUC-Ttr-129067	Tursiops truncatus	88.87	0.00e+00	1123.00
IUUC-Xtr-132116	Xenopus tropicalis	48.57	9.00e-167	580.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence