iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-098938

Ensembl Protein ID

POPTR_0004s11240.1

UniProt Accession

B9N7M5; B9N7M5_POPTR

Genbank Protein ID

ERP62068.1

Protein Name

Basic transcription factor 2 family protein

Genbank Nucleotide ID

CM000340

Gene Name

POPTRDRAFT_837441; POPTR_0004s11240g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0004s11240	POPTR_0004s11240.1	POPTR_0004s11240.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	42.24	1.00e-78	288.00	IUUC-Sce-106434

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MTNKIAEKRR QQEEDDEEDG DLDGWGERNY SDERSWEALQ EDESGLLRPL DNKAMYHAQY 60
RRRLRSLSTA SNSQRIQKGL IRFLYIVLDL SRAASVMDFR PSRMAVVAQN VEAFIREFFD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGAGAGAGA GAGAGAAGAT TTTTTTAGCG AGATGGTGAC TTCTACTTAG ATGGGTCTCA 60
TAGTCAGTGC TGCATGTACA GTTACTGCTG CTACTACTAA TAACTGCAAC AACTGTTTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR007198--Ssl1-like
IPR004595--TFIIH_C1-like_dom
IPR012170--TFIIH_SSL1/p44
IPR002035--VWF_A
IPR013087--Znf_C2H2_type

PROSITE

PS50234--VWFA
PS00028--ZINC_FINGER_C2H2_1

Pfam

PF07975--C1_4
PF04056--Ssl1

SMART

SM01047--C1_4
SM00327--VWA

Gene Ontology

GO:0000439--C:core TFIIH complex
GO:0005675--C:holo TFIIH complex
GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding
GO:0006289--P:nucleotide-excision repair
GO:0006357--P:regulation of transcription from RNA polymerase II promoter
GO:0006351--P:transcription, DNA-templated

KEGG

pop:POPTR_0004s11240g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000536	Aegilops tauschii	73.93	2.00e-113	401.00
IUUC-Aml-002041	Ailuropoda melanoleuca	43.15	3.00e-81	294.00
IUUC-Atr-003056	Amborella trichopoda	74.52	2.00e-144	504.00
IUUC-Apl-003464	Anas platyrhynchos	43.39	1.00e-73	269.00
IUUC-Aca-004745	Anolis carolinensis	42.41	4.00e-79	287.00
IUUC-Aly-005559	Arabidopsis lyrata	80.68	2.00e-174	604.00
IUUC-Ath-007556	Arabidopsis thaliana	80.68	2.00e-174	604.00
IUUC-Ago-007851	Ashbya gossypii	40.81	2.00e-79	288.00
IUUC-Acl-008100	Aspergillus clavatus	38.12	6.00e-77	280.00
IUUC-Afl-008649	Aspergillus flavus	38.10	1.00e-10	57.00
IUUC-Afu-009066	Aspergillus fumigatus	37.93	3.00e-80	291.00
IUUC-Ani-009372	Aspergillus nidulans	37.88	5.00e-78	284.00
IUUC-Ang-009726	Aspergillus niger	36.14	4.00e-81	294.00
IUUC-Aor-010135	Aspergillus oryzae	37.93	3.00e-78	285.00
IUUC-Ate-010399	Aspergillus terreus	33.97	2.00e-18	85.10
IUUC-Ame-011618	Astyanax mexicanus	43.19	2.00e-87	315.00
IUUC-Bgr-012154	Blumeria graminis	37.99	1.00e-73	270.00
IUUC-Bta-012353	Bos taurus	42.64	6.00e-84	303.00
IUUC-Bci-013932	Botrytis cinerea	38.69	6.00e-80	290.00
IUUC-Bdi-014391	Brachypodium distachyon	75.00	3.00e-159	554.00
IUUC-Bol-015128	Brassica oleracea	80.00	1.00e-174	605.00
IUUC-Bra-017932	Brassica rapa	79.79	1.00e-174	605.00
IUUC-Cel-018649	Caenorhabditis elegans	40.11	8.00e-69	253.00
IUUC-Cja-018776	Callithrix jacchus	43.15	2.00e-81	295.00
IUUC-Cfa-020584	Canis familiaris	43.41	5.00e-82	297.00
IUUC-Cpo-021300	Cavia porcellus	43.41	9.00e-81	293.00
IUUC-Cre-022657	Chlamydomonas reinhardtii	47.83	4.00e-92	331.00
IUUC-Csa-024092	Chlorocebus sabaeus	43.15	1.00e-80	293.00
IUUC-Cho-024919	Choloepus hoffmanni	43.06	1.00e-40	158.00
IUUC-Cin-025386	Ciona intestinalis	41.77	1.00e-82	299.00
IUUC-Csv-026295	Ciona savignyi	40.82	5.00e-80	290.00
IUUC-Cgl-026612	Colletotrichum gloeosporioides	37.86	1.00e-73	270.00
IUUC-Cne-026956	Cryptococcus neoformans	35.75	6.00e-75	274.00
IUUC-Cme-027150	Cyanidioschyzon merolae	34.62	4.00e-56	211.00
IUUC-Dre-027962	Danio rerio	43.56	3.00e-89	321.00
IUUC-Dno-029979	Dasypus novemcinctus	44.64	6.00e-72	263.00
IUUC-Dse-031405	Dothistroma septosporum	40.62	3.00e-77	281.00
IUUC-Dme-031710	Drosophila melanogaster	40.15	6.00e-84	303.00
IUUC-Ete-032631	Echinops telfairi	40.57	1.00e-74	273.00
IUUC-Eca-034054	Equus caballus	43.93	1.00e-82	299.00
IUUC-Fca-035724	Felis catus	41.75	2.00e-78	285.00
IUUC-Fal-036987	Ficedula albicollis	43.67	1.00e-88	319.00
IUUC-Fox-037692	Fusarium oxysporum	40.79	3.00e-83	301.00
IUUC-Fso-038442	Fusarium solani	42.01	2.00e-83	302.00
IUUC-Gmo-039273	Gadus morhua	43.93	5.00e-90	323.00
IUUC-Ggr-040009	Gaeumannomyces graminis	35.44	8.00e-66	244.00
IUUC-Gga-041089	Gallus gallus	42.64	1.00e-88	319.00
IUUC-Gac-041978	Gasterosteus aculeatus	42.64	3.00e-82	298.00
IUUC-Gma-043371	Glycine max	78.09	0.00e+00	630.00
IUUC-Hsa-046001	Homo sapiens	43.15	2.00e-80	292.00
IUUC-Itr-048355	Ictidomys tridecemlineatus	43.67	1.00e-87	316.00
IUUC-Kpa-049235	Komagataella pastoris	40.44	3.00e-76	278.00
IUUC-Lch-049926	Latimeria chalumnae	43.67	2.00e-84	305.00
IUUC-Lpe-051352	Leersia perrieri	77.38	1.00e-158	551.00
IUUC-Loc-051987	Lepisosteus oculatus	42.01	4.00e-87	314.00
IUUC-Lma-053171	Leptosphaeria maculans	34.75	2.00e-66	246.00
IUUC-Laf-054372	Loxodonta africana	42.64	4.00e-84	304.00
IUUC-Mcc-055108	Macaca mulatta	43.15	1.00e-80	292.00
IUUC-Mor-056990	Magnaporthe oryzae	37.27	2.00e-77	282.00
IUUC-Mtr-058401	Medicago truncatula	77.55	0.00e+00	630.00
IUUC-Mla-059186	Melampsora laricipopulina	41.87	9.00e-87	313.00
IUUC-Mvi-060262	Microbotryum violaceum	40.85	2.00e-86	312.00
IUUC-Mmr-061688	Microcebus murinus	39.84	2.00e-69	255.00
IUUC-Mdo-062154	Monodelphis domestica	43.41	4.00e-86	310.00
IUUC-Mmu-064232	Mus musculus	42.01	1.00e-79	289.00
IUUC-Mac-065091	Musa acuminata	73.87	2.00e-163	568.00
IUUC-Mpu-066747	Mustela putorius furo	40.05	2.00e-67	248.00
IUUC-Mlu-067799	Myotis lucifugus	40.67	1.00e-69	256.00
IUUC-Nfi-068371	Neosartorya fischeri	37.50	1.00e-12	65.50
IUUC-Ncr-068704	Neurospora crassa	38.63	7.00e-79	287.00
IUUC-Nle-069054	Nomascus leucogenys	43.15	6.00e-81	293.00
IUUC-Ont-071624	Oreochromis niloticus	43.41	8.00e-87	313.00
IUUC-Oan-072898	Ornithorhynchus anatinus	42.38	6.00e-85	307.00
IUUC-Ocu-074289	Oryctolagus cuniculus	41.72	4.00e-63	234.00
IUUC-Oba-075985	Oryza barthii	75.84	8.00e-156	542.00
IUUC-Obr-076887	Oryza brachyantha	75.84	4.00e-161	560.00
IUUC-Ogl-077823	Oryza glaberrima	75.84	8.00e-156	542.00
IUUC-Ogu-078412	Oryza glumaepatula	75.14	2.00e-138	485.00
IUUC-Oin-079569	Oryza indica	75.95	1.00e-113	402.00
IUUC-Olo-080249	Oryza longistaminata	76.82	3.00e-113	402.00
IUUC-Ome-081240	Oryza meridionalis	74.86	2.00e-137	481.00
IUUC-Oni-082152	Oryza nivara	75.86	8.00e-137	479.00
IUUC-Opu-084011	Oryza punctata	76.09	4.00e-156	543.00
IUUC-Oru-084719	Oryza rufipogon	75.14	8.00e-143	499.00
IUUC-Osa-085286	Oryza sativa	75.58	6.00e-156	543.00
IUUC-Ola-086525	Oryzias latipes	40.00	2.00e-73	268.00
IUUC-Olu-087876	Ostreococcus lucimarinus	45.71	5.00e-85	307.00
IUUC-Oga-088125	Otolemur garnettii	42.12	3.00e-82	298.00
IUUC-Oar-089701	Ovis aries	42.64	7.00e-84	303.00
IUUC-Ptr-091218	Pan troglodytes	42.89	2.00e-80	292.00
IUUC-Pan-091755	Papio anubis	43.15	1.00e-80	292.00
IUUC-Psi-094061	Pelodiscus sinensis	43.67	5.00e-86	310.00
IUUC-Pma-094430	Petromyzon marinus	44.08	2.00e-58	218.00
IUUC-Pno-094900	Phaeosphaeria nodorum	29.78	2.00e-38	153.00
IUUC-Ppa-095895	Physcomitrella patens	60.57	1.00e-148	518.00
IUUC-Pfo-096297	Poecilia formosa	45.31	5.00e-58	216.00
IUUC-Pab-097717	Pongo abelii	43.15	1.00e-80	292.00
IUUC-Pca-100389	Procavia capensis	40.87	5.00e-67	247.00
IUUC-Ppe-102045	Prunus persica	81.25	2.00e-177	614.00
IUUC-Pva-102357	Pteropus vampyrus	49.28	2.00e-40	157.00
IUUC-Pgr-103399	Puccinia graminis	41.81	1.00e-85	309.00
IUUC-Ptt-103872	Puccinia triticina	42.79	3.00e-87	315.00
IUUC-Pte-104092	Pyrenophora teres	38.51	4.00e-63	234.00
IUUC-Pyt-104669	Pyrenophora triticirepentis	39.13	1.00e-63	236.00
IUUC-Rno-105515	Rattus norvegicus	42.53	3.00e-83	301.00
IUUC-Sce-106434	Saccharomyces cerevisiae	42.07	5.00e-82	297.00
IUUC-Sha-106808	Sarcophilus harrisii	42.89	5.00e-84	304.00
IUUC-Sja-107995	Schizosaccharomyces japonicus	40.31	5.00e-76	277.00
IUUC-Spo-108044	Schizosaccharomyces pombe	40.93	1.00e-85	309.00
IUUC-Smo-109581	Selaginella moellendorffii	58.03	1.00e-134	472.00
IUUC-Sit-110704	Setaria italica	76.41	1.00e-160	558.00
IUUC-Sly-110990	Solanum lycopersicum	79.29	2.00e-142	498.00
IUUC-Stu-112542	Solanum tuberosum	71.17	2.00e-89	321.00
IUUC-Sar-113766	Sorex araneus	42.68	1.00e-69	255.00
IUUC-Sbi-114016	Sorghum bicolor	77.63	7.00e-162	562.00
IUUC-Sre-115099	Sporisorium reilianum	36.63	5.00e-78	284.00
IUUC-Ssc-115277	Sus scrofa	43.15	1.00e-78	286.00
IUUC-Tgu-117343	Taeniopygia guttata	43.52	2.00e-88	318.00
IUUC-Tru-118397	Takifugu rubripes	42.38	3.00e-83	301.00
IUUC-Tni-120272	Tetraodon nigroviridis	43.19	2.00e-83	301.00
IUUC-Tca-121514	Theobroma cacao	83.51	0.00e+00	664.00
IUUC-Tre-121990	Trichoderma reesei	40.69	4.00e-79	288.00
IUUC-Tvi-122504	Trichoderma virens	41.37	9.00e-77	280.00
IUUC-Tae-123153	Triticum aestivum	75.06	5.00e-158	550.00
IUUC-Tur-126693	Triticum urartu	82.00	3.00e-123	434.00
IUUC-Tme-127011	Tuber melanosporum	41.28	2.00e-81	295.00
IUUC-Tbe-127939	Tupaia belangeri	43.15	2.00e-80	291.00
IUUC-Ttr-128889	Tursiops truncatus	37.47	3.00e-68	251.00
IUUC-Uma-129450	Ustilago maydis	36.53	3.00e-79	288.00
IUUC-Vda-129919	Verticillium dahliae	39.16	2.00e-73	269.00
IUUC-Vvi-130928	Vitis vinifera	83.51	0.00e+00	643.00
IUUC-Xtr-131891	Xenopus tropicalis	38.27	3.00e-74	271.00
IUUC-Xma-133260	Xiphophorus maculatus	44.49	4.00e-57	213.00
IUUC-Yli-134578	Yarrowia lipolytica	40.74	9.00e-78	283.00
IUUC-Zma-135427	Zea mays	76.92	1.00e-160	558.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence