iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095895

Ensembl Protein ID

PP1S73_2V6.2

UniProt Accession

A9SFF5; A9SFF5_PHYPA

Genbank Protein ID

EDQ70042.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544962

Gene Name

PHYPADRAFT_106349

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S73_2V6	PP1S73_2V6.2	PP1S73_2V6.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	41.52	3.00e-87	317.00	IUUC-Sce-106434

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MMDMDEREVP LQLDFEDDGV EEDEPMADRG AFERQYADER SWEELQEDES GMLRVDVAQQ 60
QRQHRKRMSA MAGPRIQRGI IRYLFVLLDF SRAAAEMDLR PSRMGIVVDC VEAFVREFFD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTTCCAGCC CTACCTCAAT CTCTTCTCCT ACCTCCTCCT CTTCCTCCTC CTTCCTACTC 60
CTCCTGTAAC GTCCGTTTCC TCTATTGATA CAGTGTTGCT TTAGTGCGCC TCGCATCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR007198--Ssl1-like
IPR004595--TFIIH_C1-like_dom
IPR012170--TFIIH_SSL1/p44
IPR002035--VWF_A

PROSITE

PS50234--VWFA

Pfam

PF07975--C1_4
PF04056--Ssl1

SMART

SM01047--C1_4
SM00327--VWA

Gene Ontology

GO:0000439--C:core TFIIH complex
GO:0005675--C:holo TFIIH complex
GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding
GO:0006289--P:nucleotide-excision repair
GO:0006357--P:regulation of transcription from RNA polymerase II promoter
GO:0006351--P:transcription, DNA-templated

KEGG

ppp:PHYPADRAFT_106349

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000536	Aegilops tauschii	58.28	1.00e-96	345.00
IUUC-Aml-002041	Ailuropoda melanoleuca	42.56	1.00e-77	282.00
IUUC-Atr-003056	Amborella trichopoda	69.33	3.00e-134	470.00
IUUC-Apl-003464	Anas platyrhynchos	41.50	7.00e-71	259.00
IUUC-Aca-004745	Anolis carolinensis	42.99	7.00e-75	273.00
IUUC-Aly-005559	Arabidopsis lyrata	63.71	3.00e-143	500.00
IUUC-Ath-007556	Arabidopsis thaliana	63.45	1.00e-142	498.00
IUUC-Ago-007851	Ashbya gossypii	39.75	1.00e-83	303.00
IUUC-Acl-008100	Aspergillus clavatus	42.54	8.00e-84	303.00
IUUC-Afl-008649	Aspergillus flavus	48.53	4.00e-15	71.60
IUUC-Afu-009066	Aspergillus fumigatus	40.32	4.00e-86	311.00
IUUC-Ani-009372	Aspergillus nidulans	42.22	3.00e-83	301.00
IUUC-Ang-009726	Aspergillus niger	41.87	6.00e-89	320.00
IUUC-Aor-010135	Aspergillus oryzae	41.69	9.00e-84	303.00
IUUC-Ate-010399	Aspergillus terreus	41.98	1.00e-25	108.00
IUUC-Ame-011618	Astyanax mexicanus	41.78	3.00e-84	304.00
IUUC-Bgr-012154	Blumeria graminis	39.19	5.00e-79	287.00
IUUC-Bta-012353	Bos taurus	42.04	1.00e-79	289.00
IUUC-Bci-013932	Botrytis cinerea	41.81	7.00e-85	306.00
IUUC-Bdi-014391	Brachypodium distachyon	62.86	3.00e-137	480.00
IUUC-Bol-015128	Brassica oleracea	63.92	3.00e-145	507.00
IUUC-Bra-017932	Brassica rapa	64.34	2.00e-145	508.00
IUUC-Cel-018649	Caenorhabditis elegans	36.86	7.00e-66	243.00
IUUC-Cja-018776	Callithrix jacchus	42.30	2.00e-77	282.00
IUUC-Cfa-020584	Canis familiaris	42.56	2.00e-78	285.00
IUUC-Cpo-021300	Cavia porcellus	41.78	8.00e-76	276.00
IUUC-Cre-022657	Chlamydomonas reinhardtii	51.95	1.00e-103	369.00
IUUC-Csa-024092	Chlorocebus sabaeus	42.30	2.00e-77	281.00
IUUC-Cho-024919	Choloepus hoffmanni	38.53	2.00e-36	144.00
IUUC-Cin-025386	Ciona intestinalis	38.89	2.00e-80	291.00
IUUC-Csv-026295	Ciona savignyi	36.78	1.00e-76	279.00
IUUC-Cgl-026612	Colletotrichum gloeosporioides	40.62	3.00e-80	291.00
IUUC-Cne-026956	Cryptococcus neoformans	35.71	5.00e-77	280.00
IUUC-Cme-027150	Cyanidioschyzon merolae	33.74	2.00e-59	222.00
IUUC-Dre-027962	Danio rerio	42.41	2.00e-85	308.00
IUUC-Dno-029979	Dasypus novemcinctus	41.04	2.00e-68	251.00
IUUC-Dse-031405	Dothistroma septosporum	43.26	1.00e-84	306.00
IUUC-Dme-031710	Drosophila melanogaster	40.25	4.00e-85	307.00
IUUC-Ete-032631	Echinops telfairi	40.26	1.00e-71	262.00
IUUC-Eca-034054	Equus caballus	43.60	3.00e-78	284.00
IUUC-Fca-035724	Felis catus	40.65	2.00e-73	268.00
IUUC-Fal-036987	Ficedula albicollis	41.50	9.00e-84	303.00
IUUC-Fox-037692	Fusarium oxysporum	41.24	9.00e-87	313.00
IUUC-Fso-038442	Fusarium solani	43.31	7.00e-84	303.00
IUUC-Gmo-039273	Gadus morhua	40.15	9.00e-84	303.00
IUUC-Ggr-040009	Gaeumannomyces graminis	34.64	9.00e-70	256.00
IUUC-Gga-041089	Gallus gallus	41.00	1.00e-82	299.00
IUUC-Gac-041978	Gasterosteus aculeatus	41.04	1.00e-78	285.00
IUUC-Gma-043371	Glycine max	61.62	4.00e-146	510.00
IUUC-Hsa-046001	Homo sapiens	42.30	6.00e-77	280.00
IUUC-Itr-048355	Ictidomys tridecemlineatus	42.04	8.00e-83	300.00
IUUC-Kpa-049235	Komagataella pastoris	42.64	1.00e-86	313.00
IUUC-Lch-049926	Latimeria chalumnae	41.04	2.00e-78	285.00
IUUC-Lpe-051352	Leersia perrieri	61.40	5.00e-130	456.00
IUUC-Loc-051987	Lepisosteus oculatus	41.25	3.00e-83	301.00
IUUC-Lma-053171	Leptosphaeria maculans	35.70	7.00e-72	264.00
IUUC-Laf-054372	Loxodonta africana	42.82	5.00e-81	293.00
IUUC-Mcc-055108	Macaca mulatta	42.30	3.00e-77	281.00
IUUC-Mor-056990	Magnaporthe oryzae	38.22	8.00e-81	293.00
IUUC-Mtr-058401	Medicago truncatula	59.30	6.00e-144	503.00
IUUC-Mla-059186	Melampsora laricipopulina	41.04	1.00e-85	309.00
IUUC-Mvi-060262	Microbotryum violaceum	37.66	1.00e-79	290.00
IUUC-Mmr-061688	Microcebus murinus	39.47	2.00e-67	248.00
IUUC-Mdo-062154	Monodelphis domestica	43.08	2.00e-83	301.00
IUUC-Mmu-064232	Mus musculus	41.93	9.00e-76	276.00
IUUC-Mac-065091	Musa acuminata	62.28	3.00e-142	497.00
IUUC-Mpu-066747	Mustela putorius furo	38.64	5.00e-63	234.00
IUUC-Mlu-067799	Myotis lucifugus	39.84	7.00e-67	246.00
IUUC-Nfi-068371	Neosartorya fischeri	46.25	7.00e-17	79.00
IUUC-Ncr-068704	Neurospora crassa	42.78	4.00e-84	304.00
IUUC-Nle-069054	Nomascus leucogenys	42.30	3.00e-77	281.00
IUUC-Ont-071624	Oreochromis niloticus	41.67	9.00e-82	296.00
IUUC-Oan-072898	Ornithorhynchus anatinus	41.25	3.00e-80	291.00
IUUC-Ocu-074289	Oryctolagus cuniculus	39.73	3.00e-60	224.00
IUUC-Oba-075985	Oryza barthii	60.36	1.00e-128	451.00
IUUC-Obr-076887	Oryza brachyantha	60.36	1.00e-132	465.00
IUUC-Ogl-077823	Oryza glaberrima	60.36	1.00e-128	451.00
IUUC-Ogu-078412	Oryza glumaepatula	62.15	1.00e-115	409.00
IUUC-Oin-079569	Oryza indica	58.76	5.00e-94	337.00
IUUC-Olo-080249	Oryza longistaminata	58.50	3.00e-94	338.00
IUUC-Ome-081240	Oryza meridionalis	62.15	8.00e-115	406.00
IUUC-Oni-082152	Oryza nivara	62.15	6.00e-115	406.00
IUUC-Opu-084011	Oryza punctata	60.57	2.00e-129	455.00
IUUC-Oru-084719	Oryza rufipogon	60.06	7.00e-118	416.00
IUUC-Osa-085286	Oryza sativa	60.36	1.00e-128	452.00
IUUC-Ola-086525	Oryzias latipes	39.63	6.00e-70	256.00
IUUC-Olu-087876	Ostreococcus lucimarinus	47.14	3.00e-89	321.00
IUUC-Oga-088125	Otolemur garnettii	41.25	3.00e-77	281.00
IUUC-Oar-089701	Ovis aries	42.30	2.00e-79	288.00
IUUC-Ptr-091218	Pan troglodytes	42.04	5.00e-77	280.00
IUUC-Pan-091755	Papio anubis	42.30	3.00e-77	281.00
IUUC-Psi-094061	Pelodiscus sinensis	41.75	2.00e-81	295.00
IUUC-Pma-094430	Petromyzon marinus	40.31	1.00e-54	205.00
IUUC-Pno-094900	Phaeosphaeria nodorum	41.01	2.00e-36	146.00
IUUC-Pfo-096297	Poecilia formosa	40.17	3.00e-54	204.00
IUUC-Pab-097717	Pongo abelii	42.30	3.00e-77	281.00
IUUC-Pop-098938	Populus trichocarpa	60.47	4.00e-138	483.00
IUUC-Pca-100389	Procavia capensis	38.15	1.00e-61	229.00
IUUC-Ppe-102045	Prunus persica	63.02	6.00e-145	506.00
IUUC-Pva-102357	Pteropus vampyrus	46.92	2.00e-38	150.00
IUUC-Pgr-103399	Puccinia graminis	41.22	5.00e-87	314.00
IUUC-Ptt-103872	Puccinia triticina	41.22	6.00e-88	317.00
IUUC-Pte-104092	Pyrenophora teres	41.51	5.00e-68	250.00
IUUC-Pyt-104669	Pyrenophora triticirepentis	40.88	1.00e-68	252.00
IUUC-Rno-105515	Rattus norvegicus	42.86	4.00e-79	287.00
IUUC-Sce-106434	Saccharomyces cerevisiae	41.52	1.00e-87	316.00
IUUC-Sha-106808	Sarcophilus harrisii	42.56	3.00e-81	294.00
IUUC-Sja-107995	Schizosaccharomyces japonicus	41.33	3.00e-78	284.00
IUUC-Spo-108044	Schizosaccharomyces pombe	41.90	3.00e-87	314.00
IUUC-Smo-109581	Selaginella moellendorffii	63.78	8.00e-145	505.00
IUUC-Sit-110704	Setaria italica	60.88	1.00e-133	468.00
IUUC-Sly-110990	Solanum lycopersicum	63.52	2.00e-121	427.00
IUUC-Stu-112542	Solanum tuberosum	62.84	6.00e-78	282.00
IUUC-Sar-113766	Sorex araneus	40.69	7.00e-66	243.00
IUUC-Sbi-114016	Sorghum bicolor	60.77	5.00e-133	466.00
IUUC-Sre-115099	Sporisorium reilianum	36.94	4.00e-78	284.00
IUUC-Ssc-115277	Sus scrofa	42.56	5.00e-75	273.00
IUUC-Tgu-117343	Taeniopygia guttata	40.75	2.00e-83	301.00
IUUC-Tru-118397	Takifugu rubripes	42.41	2.00e-80	292.00
IUUC-Tni-120272	Tetraodon nigroviridis	41.15	8.00e-79	286.00
IUUC-Tca-121514	Theobroma cacao	61.44	5.00e-148	516.00
IUUC-Tre-121990	Trichoderma reesei	39.76	6.00e-78	284.00
IUUC-Tvi-122504	Trichoderma virens	41.48	2.00e-74	272.00
IUUC-Tae-123153	Triticum aestivum	61.56	1.00e-135	475.00
IUUC-Tur-126693	Triticum urartu	63.40	2.00e-108	384.00
IUUC-Tme-127011	Tuber melanosporum	43.14	2.00e-82	298.00
IUUC-Tbe-127939	Tupaia belangeri	42.56	3.00e-77	281.00
IUUC-Ttr-128889	Tursiops truncatus	35.77	8.00e-64	236.00
IUUC-Uma-129450	Ustilago maydis	36.83	2.00e-76	279.00
IUUC-Vda-129919	Verticillium dahliae	39.45	5.00e-70	257.00
IUUC-Vvi-130928	Vitis vinifera	63.38	1.00e-144	505.00
IUUC-Xtr-131891	Xenopus tropicalis	38.30	2.00e-70	258.00
IUUC-Xma-133260	Xiphophorus maculatus	39.33	4.00e-53	200.00
IUUC-Yli-134578	Yarrowia lipolytica	43.30	1.00e-83	303.00
IUUC-Zma-135427	Zea mays	61.22	1.00e-133	468.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence