iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000009245.1	ENSORLT00000011590.1	ENSORLP00000011589.1
ENSORLG00000009245.1	ENSORLT00000011592.1	ENSORLP00000011591.1
ENSORLG00000009245.1	ENSORLT00000011594.1	ENSORLP00000011593.1
ENSORLG00000009245.1	ENSORLT00000011595.1	ENSORLP00000011594.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.00e-11	43.1	417	466
E3 activity/RING/RING	6.30e-11	42.9	422	460

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpltee 53
           p ++ C++ + l+ +Pv++p+G+t+  +++e++l+++ k cP+++++l+e 
   Q: 417  PTDLECSLCMRLFYEPVTTPCGHTFCLQCLERCLDHNPK-CPLCKEELSEY 466
           67899*********************************9.********654 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+  f + p+++pCgH+f+++Cl++          + +CPlC+
   Q: 422  CSLCMRLFYE-PVTTPCGHTFCLQCLERC------LDHNPKCPLCK 460
           ****999977.***************999......9*********7 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MLHLAAQAFR AKNFDLAAEI YECQLACLGE AESRLELMVK RADALAFGDK ISDAFEVYRQ 60
ASEIEKLRPA HLANLMDYLI RNIRTQDRRT AEQEAARAVG ESGRGLISCG MCLGFLFEPV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGCACC TCGCAGCTCA GGCTTTCCGG GCGAAAAACT TCGACCTGGC GGCGGAAATT 60
TACGAGTGTC AGCTGGCGTG TCTCGGAGAA GCGGAGAGCC GGCTGGAGCT GATGGTGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0802--TPR repeat

Interpro

IPR023114--Elongated_TPR_rpt_dom
IPR003111--Lon_substr-bd
IPR007330--MIT
IPR015947--PUA-like_domain
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
IPR003613--Ubox_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51787--LON_N
PS50293--TPR_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02190--LON_substr_bdg

SMART

SM00464--LON
SM00184--RING
SM00028--TPR
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001774	Ailuropoda melanoleuca	70.67	1.00e-131	464.00
IUUC-Apl-003916	Anas platyrhynchos	75.50	9.00e-143	499.00
IUUC-Ame-010881	Astyanax mexicanus	79.36	9.00e-144	503.00
IUUC-Bta-012872	Bos taurus	49.02	3.00e-174	605.00
IUUC-Cfa-020101	Canis familiaris	67.59	2.00e-130	459.00
IUUC-Cpo-022041	Cavia porcellus	69.45	1.00e-130	460.00
IUUC-Dno-029518	Dasypus novemcinctus	46.72	1.00e-151	530.00
IUUC-Dor-031132	Dipodomys ordii	65.62	1.00e-127	450.00
IUUC-Fca-035777	Felis catus	67.49	1.00e-127	449.00
IUUC-Fal-036730	Ficedula albicollis	74.51	9.00e-144	503.00
IUUC-Gmo-039110	Gadus morhua	76.64	2.00e-143	502.00
IUUC-Gac-042201	Gasterosteus aculeatus	85.36	7.00e-167	580.00
IUUC-Lch-050429	Latimeria chalumnae	53.64	0.00e+00	734.00
IUUC-Loc-051823	Lepisosteus oculatus	58.32	0.00e+00	803.00
IUUC-Laf-053434	Loxodonta africana	48.50	4.00e-133	468.00
IUUC-Mcc-055249	Macaca mulatta	52.10	8.00e-130	456.00
IUUC-Mga-060131	Meleagris gallopavo	57.91	3.00e-165	574.00
IUUC-Mdo-062261	Monodelphis domestica	69.26	5.00e-132	464.00
IUUC-Mpu-066222	Mustela putorius furo	67.28	7.00e-130	457.00
IUUC-Ont-072029	Oreochromis niloticus	71.16	0.00e+00	923.00
IUUC-Oan-073179	Ornithorhynchus anatinus	71.96	9.00e-142	496.00
IUUC-Ocu-074884	Oryctolagus cuniculus	67.60	1.00e-129	457.00
IUUC-Oga-089109	Otolemur garnettii	67.50	7.00e-130	457.00
IUUC-Oar-089903	Ovis aries	49.37	1.00e-175	609.00
IUUC-Pfo-097284	Poecilia formosa	76.25	0.00e+00	1025.00
IUUC-Pva-102242	Pteropus vampyrus	68.21	8.00e-125	441.00
IUUC-Rno-105899	Rattus norvegicus	52.08	1.00e-175	610.00
IUUC-Sha-107565	Sarcophilus harrisii	68.54	3.00e-124	439.00
IUUC-Spo-108344	Schizosaccharomyces pombe	27.59	5.00e-24	105.00
IUUC-Sre-114977	Sporisorium reilianum	33.20	1.00e-32	135.00
IUUC-Ssc-115705	Sus scrofa	70.03	3.00e-130	459.00
IUUC-Tgu-116978	Taeniopygia guttata	75.33	5.00e-143	501.00
IUUC-Tsy-118988	Tarsius syrichta	68.44	1.00e-131	462.00
IUUC-Ttr-128875	Tursiops truncatus	69.71	9.00e-129	454.00
IUUC-Vpa-130779	Vicugna pacos	70.03	6.00e-120	424.00
IUUC-Xtr-132508	Xenopus tropicalis	51.54	0.00e+00	680.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence