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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Hsa-046092
Ensembl Protein ID ENSP00000422552.1
UniProt Accession G5E9Y7; G5E9Y7_HUMAN
Genbank Protein ID EAW92766.1
Protein Name LIM domain binding 2, isoform CRA_b; LIM domain-binding protein 2
Genbank Nucleotide ID AC005690
Gene Name LDB2; hCG_1811661
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSG00000169744.12 ENST00000515064.5 ENSP00000422552.1
ENSG00000169744.12 ENST00000441778.6 ENSP00000392089.2
ENSG00000169744.12 ENST00000304523.9 ENSP00000306772.5
ENSG00000169744.12 ENST00000502640.5 ENSP00000423963.1
ENSG00000169744.12 ENST00000507464.5 ENSP00000425754.1
ENSG00000169744.12 ENST00000508918.5 ENSP00000424770.1
ENSG00000169744.12 ENST00000512345.5 ENSP00000424676.1
Annotation
Cancer Mutation
TCGAICGCCOSMICCGAP
IntOGen
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpressTCGAICGC
COSMICTHPAHPM
DNA & RNA Element
UTRdbAREsitecircBasecircRNADb
CircNetmiRTarBasemicroRNATRANSFAC
TargetScanRepTarSomamiRmiRcode
RAID2
Protein-protein Interaction
HINTInWeb_IM
Disease-associated Variation
GWASdbOMIM
Post-translational Modifications (PTMs)
BioGRID
DNA Methylation
TCGAICGCCOSMIC
Protein Expression/Proteomics
THPAHPMGPMDB
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/U-box 63.72 5.00e-125 444.00 IUUC-Dme-031667
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Homo sapiens
Protein Sequence
(Fasta)
MSSTPHDPFY SSPFGPFYRR HTPYMVQPEY RIYEMNKRLQ SRTEDSDNLW WDAFATEFFE 60
DDATLTLSFC LEDGPKRYTI GRTLIPRYFS TVFEGGVTDL YYILKHSKES YHNSSITVDC 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Hsa-046092|E3,U-box|Homo sapiens
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CCCTCCCTCC CTTCTTCCCT CCCTTCCTCC ATACCAACCT CCCTCCCTCT CTGGAGCTCC 60
TGCTCTCTCC CTCTCCCTCC TCTCCCGTGC TCCCTCCCTC CCTCCCTCTT TCCCTCCCTC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Hsa-046092|E3,U-box|Homo sapiens
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
Interpro

IPR030174--LDB2
IPR029005--LIM-bd/SEUSS
Gene Ontology

GO:0005730--C:nucleolus
GO:0005634--C:nucleus
GO:0005886--C:plasma membrane
GO:0000989--F:transcription factor activity, transcription factor binding
GO:0006357--P:regulation of transcription from RNA polymerase II promoter
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000177 Aegilops tauschii 23.84 1.00e-03 38.90
IUUC-Aml-002031 Ailuropoda melanoleuca 77.09 4.00e-152 531.00
IUUC-Atr-003083 Amborella trichopoda 21.39 2.00e-04 41.60
IUUC-Apl-004210 Anas platyrhynchos 80.83 1.00e-119 422.00
IUUC-Aca-005241 Anolis carolinensis 78.21 3.00e-154 538.00
IUUC-Aly-006204 Arabidopsis lyrata 24.56 2.00e-06 48.10
IUUC-Ath-007339 Arabidopsis thaliana 24.56 2.00e-06 48.10
IUUC-Ame-010910 Astyanax mexicanus 73.18 4.00e-149 520.00
IUUC-Bgr-012180 Blumeria graminis 21.30 2.00e-06 48.50
IUUC-Bta-012596 Bos taurus 98.11 0.00e+00 681.00
IUUC-Bci-013927 Botrytis cinerea 28.57 2.00e-08 54.70
IUUC-Bol-015721 Brassica oleracea 24.40 1.00e-06 48.90
IUUC-Bra-017183 Brassica rapa 24.40 1.00e-06 48.90
IUUC-Cel-018189 Caenorhabditis elegans 33.77 6.00e-29 122.00
IUUC-Cja-019586 Callithrix jacchus 99.20 0.00e+00 692.00
IUUC-Cfa-021188 Canis familiaris 77.09 7.00e-152 530.00
IUUC-Cpo-022350 Cavia porcellus 77.09 1.00e-150 525.00
IUUC-Csa-023816 Chlorocebus sabaeus 77.37 3.00e-152 531.00
IUUC-Cho-024958 Choloepus hoffmanni 80.58 1.00e-93 337.00
IUUC-Cin-025721 Ciona intestinalis 53.75 1.00e-93 336.00
IUUC-Csv-026065 Ciona savignyi 56.07 3.00e-97 348.00
IUUC-Dre-027356 Danio rerio 82.99 0.00e+00 632.00
IUUC-Dno-029918 Dasypus novemcinctus 77.51 2.00e-148 519.00
IUUC-Dor-030634 Dipodomys ordii 77.09 4.00e-152 530.00
IUUC-Dse-031245 Dothistroma septosporum 25.00 6.00e-04 40.00
IUUC-Dme-031667 Drosophila melanogaster 63.93 6.00e-125 441.00
IUUC-Ete-032246 Echinops telfairi 95.98 0.00e+00 660.00
IUUC-Eca-034015 Equus caballus 98.66 0.00e+00 689.00
IUUC-Eeu-034902 Erinaceus europaeus 77.09 4.00e-152 530.00
IUUC-Fca-035903 Felis catus 76.67 1.00e-150 525.00
IUUC-Fal-037407 Ficedula albicollis 98.38 0.00e+00 670.00
IUUC-Gmo-039466 Gadus morhua 75.21 4.00e-157 547.00
IUUC-Ggr-040030 Gaeumannomyces graminis 23.98 4.00e-05 43.90
IUUC-Gga-040214 Gallus gallus 78.65 8.00e-156 543.00
IUUC-Gac-042214 Gasterosteus aculeatus 74.79 1.00e-158 552.00
IUUC-Gma-042794 Glycine max 24.34 1.00e-08 55.50
IUUC-Ggo-044988 Gorilla gorilla 99.20 0.00e+00 697.00
IUUC-Itr-047934 Ictidomys tridecemlineatus 77.09 7.00e-152 530.00
IUUC-Lch-049895 Latimeria chalumnae 87.55 5.00e-106 377.00
IUUC-Lpe-050806 Leersia perrieri 26.76 5.00e-05 43.50
IUUC-Loc-052845 Lepisosteus oculatus 75.91 2.00e-155 541.00
IUUC-Lma-053090 Leptosphaeria maculans 25.20 4.00e-06 47.00
IUUC-Laf-054538 Loxodonta africana 76.15 1.00e-154 539.00
IUUC-Mcc-055116 Macaca mulatta 100.00 7.00e-156 543.00
IUUC-Meu-056777 Macropus eugenii 71.79 6.00e-137 480.00
IUUC-Mpo-057376 Magnaporthe poae 24.28 2.00e-05 44.70
IUUC-Mtr-058142 Medicago truncatula 25.38 4.00e-08 53.90
IUUC-Mga-059716 Meleagris gallopavo 97.30 0.00e+00 665.00
IUUC-Mmr-060649 Microcebus murinus 98.66 0.00e+00 692.00
IUUC-Mdo-062535 Monodelphis domestica 97.86 0.00e+00 673.00
IUUC-Mmu-064036 Mus musculus 97.57 0.00e+00 693.00
IUUC-Mac-065338 Musa acuminata 24.02 7.00e-06 46.60
IUUC-Mpu-065719 Mustela putorius furo 77.09 7.00e-152 530.00
IUUC-Mlu-067219 Myotis lucifugus 76.11 4.00e-149 521.00
IUUC-Ncr-068691 Neurospora crassa 20.61 5.00e-04 40.00
IUUC-Nle-068983 Nomascus leucogenys 99.44 0.00e+00 658.00
IUUC-Opr-070467 Ochotona princeps 77.09 4.00e-152 530.00
IUUC-Ont-071566 Oreochromis niloticus 76.26 2.00e-159 555.00
IUUC-Oan-073368 Ornithorhynchus anatinus 77.93 8.00e-153 533.00
IUUC-Ocu-074854 Oryctolagus cuniculus 97.77 0.00e+00 657.00
IUUC-Ola-086364 Oryzias latipes 76.54 8.00e-159 553.00
IUUC-Oga-088235 Otolemur garnettii 97.59 0.00e+00 678.00
IUUC-Oar-089547 Ovis aries 77.09 3.00e-152 531.00
IUUC-Ptr-091423 Pan troglodytes 99.20 0.00e+00 692.00
IUUC-Pan-092378 Papio anubis 77.37 2.00e-152 532.00
IUUC-Psi-093638 Pelodiscus sinensis 97.32 0.00e+00 660.00
IUUC-Pma-094384 Petromyzon marinus 63.64 5.00e-55 206.00
IUUC-Pno-095027 Phaeosphaeria nodorum 22.18 7.00e-07 49.30
IUUC-Pfo-096031 Poecilia formosa 75.42 2.00e-160 558.00
IUUC-Pab-097886 Pongo abelii 99.44 0.00e+00 658.00
IUUC-Pop-099430 Populus trichocarpa 25.82 2.00e-06 48.50
IUUC-Pca-101138 Procavia capensis 77.09 4.00e-152 530.00
IUUC-Ppe-101293 Prunus persica 23.87 2.00e-07 50.80
IUUC-Pva-103215 Pteropus vampyrus 98.39 0.00e+00 692.00
IUUC-Pte-104238 Pyrenophora teres 29.49 1.00e-05 44.70
IUUC-Rno-105968 Rattus norvegicus 98.38 0.00e+00 699.00
IUUC-Sha-107595 Sarcophilus harrisii 77.09 5.00e-150 524.00
IUUC-Sja-107950 Schizosaccharomyces japonicus 16.97 3.00e-05 43.10
IUUC-Ssl-108527 Sclerotinia sclerotiorum 24.68 4.00e-06 47.00
IUUC-Smo-109552 Selaginella moellendorffii 19.70 4.00e-06 47.40
IUUC-Sly-110873 Solanum lycopersicum 26.09 4.00e-07 50.40
IUUC-Stu-112586 Solanum tuberosum 20.96 7.00e-06 46.20
IUUC-Sar-113076 Sorex araneus 91.53 1.00e-135 476.00
IUUC-Sre-115143 Sporisorium reilianum 23.81 1.40e-01 32.00
IUUC-Ssc-115755 Sus scrofa 77.53 1.00e-153 536.00
IUUC-Tgu-117326 Taeniopygia guttata 98.11 0.00e+00 667.00
IUUC-Tru-117858 Takifugu rubripes 82.57 0.00e+00 641.00
IUUC-Tsy-119296 Tarsius syrichta 91.96 4.00e-180 623.00
IUUC-Tni-119822 Tetraodon nigroviridis 74.79 5.00e-158 550.00
IUUC-Tca-120935 Theobroma cacao 25.38 4.00e-08 53.90
IUUC-Tbe-127366 Tupaia belangeri 76.26 9.00e-147 513.00
IUUC-Ttr-128484 Tursiops truncatus 87.40 4.00e-171 593.00
IUUC-Vpa-130304 Vicugna pacos 98.98 2.00e-154 538.00
IUUC-Vvi-131560 Vitis vinifera 23.01 8.00e-06 46.60
IUUC-Xtr-132062 Xenopus tropicalis 78.65 5.00e-156 543.00
IUUC-Xma-134288 Xiphophorus maculatus 76.54 3.00e-160 557.00
IUUC-Yli-134374 Yarrowia lipolytica 20.47 2.00e-03 37.70
IUUC-Zma-135310 Zea mays 24.61 6.00e-04 40.00
Created Date 25-Jun-2017

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