iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Nfi-068489

Ensembl Protein ID

CADNFIAP00008391

UniProt Accession

A1DGC6; A1DGC6_NEOFI

Genbank Protein ID

EAW18433.1

Protein Name

RNA polymerase II transcription factor SIII (Elongin) subunit A, putative

Genbank Nucleotide ID

DS027696

Gene Name

NFIA_083850

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CADNFIAG00008558	CADNFIAT00008558	CADNFIAP00008391

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	26.71	1.00e-08	55.50	IUUC-Sce-106376
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	26.71	1.00e-08	55.50	IUUC-Sce-106376

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Neosartorya fischeri

Protein Sequence
(Fasta)

MPPPSLLQLC TSTAIRNVKY LNDIGNVPYS LARPFLLKIE SPEKLRSLEL LSPHIMEEDA 60
ELWLDFIKRD IPRWDEYDLP EQPDCWYDVY CDLQQRVQKA VEEDAEKLKM ALDGINSERA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGCCGC CATCGCTTTT ACAGCTTTGC ACCTCGACTG CCATTAGGAA CGTTAAATGT 60
CAGTTTTTAA GTGCGATATA CCCATATTGA ACACTGTCTA ACAGTATTTC TAGATTTGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR010684--RNA_pol_II_trans_fac_SIII_A

Pfam

PF06881--Elongin_A

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005634--C:nucleus
GO:0006355--P:regulation of transcription, DNA-templated

KEGG

nfi:NFIA_083850

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001705	Ailuropoda melanoleuca	31.34	2.00e-05	42.70
IUUC-Apl-003659	Anas platyrhynchos	25.56	1.00e-06	47.00
IUUC-Aca-004513	Anolis carolinensis	26.67	1.00e-06	46.60
IUUC-Ago-007835	Ashbya gossypii	45.71	3.00e-12	64.30
IUUC-Acl-008085	Aspergillus clavatus	84.17	5.00e-129	452.00
IUUC-Afu-008931	Aspergillus fumigatus	95.48	1.00e-180	624.00
IUUC-Ani-009161	Aspergillus nidulans	48.87	4.00e-87	312.00
IUUC-Ang-009875	Aspergillus niger	57.25	4.00e-108	382.00
IUUC-Ame-011668	Astyanax mexicanus	26.83	5.00e-08	51.20
IUUC-Bci-014000	Botrytis cinerea	29.83	1.00e-26	112.00
IUUC-Bdi-014527	Brachypodium distachyon	38.24	1.80e-02	31.20
IUUC-Bol-016438	Brassica oleracea	33.33	3.00e-04	38.10
IUUC-Bra-017526	Brassica rapa	33.33	2.00e-04	38.50
IUUC-Cel-018281	Caenorhabditis elegans	22.40	2.00e-07	48.50
IUUC-Cja-018759	Callithrix jacchus	28.36	8.00e-04	37.70
IUUC-Cfa-020766	Canis familiaris	28.36	8.00e-05	40.80
IUUC-Cpo-022250	Cavia porcellus	31.34	1.00e-05	43.50
IUUC-Cre-022851	Chlamydomonas reinhardtii	27.78	5.80e-01	27.30
IUUC-Csa-023293	Chlorocebus sabaeus	29.85	3.00e-05	42.40
IUUC-Cgl-026733	Colletotrichum gloeosporioides	28.22	1.00e-18	85.50
IUUC-Cne-026936	Cryptococcus neoformans	27.34	1.00e-05	42.40
IUUC-Cme-027246	Cyanidioschyzon merolae	26.32	4.80e-01	28.50
IUUC-Dre-027828	Danio rerio	20.91	9.00e-03	33.50
IUUC-Dse-031436	Dothistroma septosporum	34.80	9.00e-32	129.00
IUUC-Dme-031809	Drosophila melanogaster	25.69	9.00e-08	50.40
IUUC-Ete-032677	Echinops telfairi	27.78	2.00e-07	49.70
IUUC-Eca-034045	Equus caballus	26.67	3.00e-06	44.70
IUUC-Eeu-035063	Erinaceus europaeus	31.34	4.00e-05	42.00
IUUC-Fca-036488	Felis catus	29.85	3.00e-05	42.00
IUUC-Fal-037501	Ficedula albicollis	27.78	2.00e-07	49.30
IUUC-Fox-038013	Fusarium oxysporum	40.00	2.00e-22	98.20
IUUC-Fso-038123	Fusarium solani	35.04	2.00e-21	94.70
IUUC-Gmo-038614	Gadus morhua	25.58	4.00e-06	45.10
IUUC-Ggr-039793	Gaeumannomyces graminis	28.30	1.00e-20	92.00
IUUC-Gga-040738	Gallus gallus	27.78	3.00e-07	48.90
IUUC-Gac-041381	Gasterosteus aculeatus	28.45	8.00e-11	60.50
IUUC-Gma-042964	Glycine max	38.89	1.00e-03	35.00
IUUC-Ggo-045139	Gorilla gorilla	29.85	3.00e-05	42.70
IUUC-Hsa-046083	Homo sapiens	29.85	2.00e-05	42.70
IUUC-Itr-048970	Ictidomys tridecemlineatus	26.87	2.00e-04	39.70
IUUC-Kpa-049376	Komagataella pastoris	25.74	9.00e-09	52.00
IUUC-Lch-050369	Latimeria chalumnae	25.62	8.00e-07	47.40
IUUC-Lpe-050727	Leersia perrieri	28.99	3.00e-03	33.90
IUUC-Loc-052347	Lepisosteus oculatus	30.23	7.00e-10	57.40
IUUC-Lma-053027	Leptosphaeria maculans	29.51	4.00e-12	63.50
IUUC-Laf-053575	Loxodonta africana	31.34	2.00e-05	43.10
IUUC-Mcc-054823	Macaca mulatta	29.85	3.00e-05	42.40
IUUC-Meu-056878	Macropus eugenii	29.67	6.00e-09	53.90
IUUC-Mor-056948	Magnaporthe oryzae	37.50	1.00e-20	92.40
IUUC-Mtr-057811	Medicago truncatula	42.42	1.00e-03	35.00
IUUC-Mla-058917	Melampsora laricipopulina	46.15	2.00e-08	51.60
IUUC-Mga-059445	Meleagris gallopavo	27.78	4.00e-07	48.50
IUUC-Mmr-060665	Microcebus murinus	29.85	3.00e-05	42.40
IUUC-Mdo-062430	Monodelphis domestica	32.22	1.00e-08	53.50
IUUC-Mmu-064173	Mus musculus	29.85	3.00e-05	42.40
IUUC-Mac-065364	Musa acuminata	42.42	1.00e-04	38.10
IUUC-Mpu-066344	Mustela putorius furo	29.85	4.00e-05	42.00
IUUC-Mlu-068101	Myotis lucifugus	29.85	2.00e-05	42.70
IUUC-Ont-071579	Oreochromis niloticus	26.83	9.00e-07	47.00
IUUC-Oan-072862	Ornithorhynchus anatinus	30.00	5.00e-09	54.70
IUUC-Ocu-073882	Oryctolagus cuniculus	29.85	2.00e-05	43.10
IUUC-Oba-075710	Oryza barthii	24.34	7.00e-03	32.30
IUUC-Ogl-077171	Oryza glaberrima	22.43	1.20e-02	32.00
IUUC-Ogu-078827	Oryza glumaepatula	35.29	2.00e-02	31.60
IUUC-Oin-080204	Oryza indica	24.34	9.00e-03	32.30
IUUC-Olo-081049	Oryza longistaminata	24.86	2.00e-03	35.00
IUUC-Ome-081128	Oryza meridionalis	34.29	9.00e-03	31.20
IUUC-Oni-083077	Oryza nivara	23.94	7.00e-03	32.70
IUUC-Opu-083270	Oryza punctata	25.93	1.00e-03	35.40
IUUC-Oru-084299	Oryza rufipogon	34.29	9.00e-03	31.20
IUUC-Osa-085671	Oryza sativa	35.29	2.10e-02	28.90
IUUC-Ola-086456	Oryzias latipes	26.74	9.00e-07	47.40
IUUC-Oga-087918	Otolemur garnettii	29.85	3.00e-05	42.40
IUUC-Oar-089663	Ovis aries	27.78	2.00e-07	49.30
IUUC-Ptr-091033	Pan troglodytes	29.85	3.00e-05	42.40
IUUC-Pan-092277	Papio anubis	29.85	2.00e-05	42.70
IUUC-Psi-094086	Pelodiscus sinensis	25.56	8.00e-07	47.40
IUUC-Pma-094683	Petromyzon marinus	34.33	4.00e-08	50.40
IUUC-Pno-094930	Phaeosphaeria nodorum	34.59	3.00e-22	97.10
IUUC-Pfo-097334	Poecilia formosa	25.58	9.00e-07	47.00
IUUC-Pab-098345	Pongo abelii	29.85	2.00e-05	42.70
IUUC-Pop-099683	Populus trichocarpa	53.57	3.00e-04	35.80
IUUC-Pca-100737	Procavia capensis	32.84	5.00e-06	45.10
IUUC-Pva-102497	Pteropus vampyrus	31.34	2.00e-05	43.10
IUUC-Pgr-103464	Puccinia graminis	35.29	9.00e-08	47.80
IUUC-Pte-104288	Pyrenophora teres	28.03	5.00e-22	96.30
IUUC-Pyt-104772	Pyrenophora triticirepentis	29.92	2.00e-21	94.40
IUUC-Rno-105177	Rattus norvegicus	29.85	2.00e-05	42.70
IUUC-Sce-106376	Saccharomyces cerevisiae	33.33	8.00e-09	53.10
IUUC-Sha-106480	Sarcophilus harrisii	32.22	7.00e-09	54.30
IUUC-Sja-107782	Schizosaccharomyces japonicus	29.55	2.00e-09	54.30
IUUC-Spo-108157	Schizosaccharomyces pombe	28.79	9.00e-08	48.10
IUUC-Sar-113255	Sorex araneus	29.85	3.00e-05	42.00
IUUC-Sbi-114855	Sorghum bicolor	35.29	2.40e-02	30.80
IUUC-Sre-115076	Sporisorium reilianum	28.36	8.00e-11	60.50
IUUC-Ssc-115875	Sus scrofa	30.00	3.00e-07	49.30
IUUC-Tgu-117066	Taeniopygia guttata	27.78	3.00e-07	49.30
IUUC-Tru-117881	Takifugu rubripes	25.61	5.00e-06	44.30
IUUC-Tsy-119531	Tarsius syrichta	26.67	5.00e-06	44.70
IUUC-Tni-120325	Tetraodon nigroviridis	24.14	3.00e-08	52.40
IUUC-Tre-122105	Trichoderma reesei	27.91	6.00e-14	68.90
IUUC-Tvi-122542	Trichoderma virens	29.17	1.00e-19	87.80
IUUC-Tae-122727	Triticum aestivum	26.09	8.00e-03	32.70
IUUC-Tur-126506	Triticum urartu	31.43	7.00e-03	32.30
IUUC-Tbe-127648	Tupaia belangeri	29.85	3.00e-05	42.40
IUUC-Ttr-129287	Tursiops truncatus	31.11	2.00e-07	49.70
IUUC-Uma-129543	Ustilago maydis	35.82	7.00e-08	50.80
IUUC-Vpa-130645	Vicugna pacos	30.00	4.00e-07	48.50
IUUC-Xtr-132709	Xenopus tropicalis	26.37	5.00e-08	51.20
IUUC-Xma-133858	Xiphophorus maculatus	25.58	7.00e-07	47.40
IUUC-Yli-134386	Yarrowia lipolytica	25.63	1.00e-10	58.50
IUUC-Zma-135412	Zea mays	35.29	1.80e-02	31.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence