iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017936

Ensembl Protein ID

Bra007515.1-P

UniProt Accession

M4CTH2; M4CTH2_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra007515	Bra007515.1	Bra007515.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-07	33.2	107	149

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+ f  +d++++lp C H+fhadC+  w         +++CPlCr
   Q: 107  CAVCLSKFepEDQLRLLPlCCHAFHADCIDTW------LVSNQTCPLCR 149
           ******9988777*******************......999*******8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MDSHINPSHG GNSSSLDSLK PSVLATIIIL LITLLVSVSI CVLLRCLNRC NHHHSPLSPS 60
PSDSLRFSTH RVSPETERSS SVLDSLPIFK FSSVTRRSST SSDSSDCAVC LSKFEPEDQL 120

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Nucleotide Sequence
(Fasta)

ATGGACTCTC ACATCAACCC TAGCCATGGC GGAAACTCTT CTTCTCTCGA CAGTCTCAAA 60
CCAAGCGTAC TAGCCACCAT CATCATCCTT CTCATCACTC TCCTCGTCTC CGTCTCCATT 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-016107	Brassica oleracea	85.49	6.00e-130	456.00
IUUC-Gma-043797	Glycine max	50.97	4.00e-45	174.00
IUUC-Hvu-047273	Hordeum vulgare	33.50	1.00e-24	106.00
IUUC-Meu-056649	Macropus eugenii	34.35	9.00e-14	70.90
IUUC-Sha-107293	Sarcophilus harrisii	34.35	1.00e-13	70.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence