iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
iRefIndex	Mentha
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.40e-13	50.4	514	564

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsek..wiCpkCrs 53
            C vC++++e+  + ++C++C++ +H +Cl+++  + lp++++  wiC +C++
   Q: 514  TCVVCRKSTEQH-KQTQCDECHKSYHIGCLSPP-LTRLPKRNNfgWICHECNE 564
           6*********87.59******************.99999999999******97 PP

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MSNTPESSIF GKMTSRAAGK RQIKPTAILF ATLTENHTSD EEDDDFEVNP AENDAKTGSE 60
ADSGSDSQEN SDEEESEDEE NDEEEAESAE SSEKPERTPS AEKDAVICGV CINQRNIVAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGCTCTATC ATCATGTCAA ACACTCCGGA ATCCTCGATT TTCGGGAAAA TGAGTAGGAT 60
TCCGTGTTTT TCAGCGTTTC CCCGATAATT TTCGCGATTT TCAGCTTCCC GTGCGGCTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR034732--EPHD
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51805--EPHD
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

cel:CELE_Y59A8A.2

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001978	Ailuropoda melanoleuca	29.09	4.00e-51	195.00
IUUC-Apl-003491	Anas platyrhynchos	28.63	6.00e-50	191.00
IUUC-Aca-004470	Anolis carolinensis	28.11	3.00e-49	189.00
IUUC-Ame-011188	Astyanax mexicanus	28.76	2.00e-52	199.00
IUUC-Bta-012312	Bos taurus	28.90	4.00e-51	195.00
IUUC-Bra-017824	Brassica rapa	37.74	8.00e-07	48.90
IUUC-Cja-019931	Callithrix jacchus	29.09	6.00e-51	194.00
IUUC-Cfa-021102	Canis familiaris	29.09	4.00e-51	195.00
IUUC-Cpo-022179	Cavia porcellus	28.96	3.00e-16	79.70
IUUC-Csa-023396	Chlorocebus sabaeus	29.09	5.00e-51	195.00
IUUC-Cin-025300	Ciona intestinalis	32.49	3.00e-22	98.20
IUUC-Csv-026365	Ciona savignyi	46.30	7.00e-11	57.00
IUUC-Dre-028450	Danio rerio	27.89	5.00e-49	188.00
IUUC-Dno-029245	Dasypus novemcinctus	29.09	3.00e-51	195.00
IUUC-Dor-030376	Dipodomys ordii	34.78	3.00e-11	62.00
IUUC-Dme-031650	Drosophila melanogaster	27.03	1.00e-46	180.00
IUUC-Ete-032829	Echinops telfairi	25.39	2.00e-34	139.00
IUUC-Eca-033527	Equus caballus	29.09	3.00e-51	195.00
IUUC-Eeu-035092	Erinaceus europaeus	26.35	7.00e-37	148.00
IUUC-Fca-035825	Felis catus	28.96	3.00e-16	79.70
IUUC-Fal-037349	Ficedula albicollis	28.82	2.00e-50	193.00
IUUC-Gmo-038924	Gadus morhua	27.51	2.00e-43	169.00
IUUC-Gga-040604	Gallus gallus	28.63	7.00e-50	191.00
IUUC-Gac-041895	Gasterosteus aculeatus	27.53	3.00e-44	172.00
IUUC-Ggo-044724	Gorilla gorilla	28.08	7.00e-43	167.00
IUUC-Hsa-046740	Homo sapiens	29.09	4.00e-51	195.00
IUUC-Itr-047942	Ictidomys tridecemlineatus	28.96	3.00e-16	79.30
IUUC-Lch-050481	Latimeria chalumnae	28.49	5.00e-51	194.00
IUUC-Loc-052530	Lepisosteus oculatus	27.20	2.00e-49	189.00
IUUC-Laf-053683	Loxodonta africana	29.03	8.00e-51	194.00
IUUC-Mcc-055254	Macaca mulatta	29.09	4.00e-51	195.00
IUUC-Meu-056124	Macropus eugenii	43.86	2.00e-12	67.00
IUUC-Mga-059286	Meleagris gallopavo	28.42	5.00e-16	78.60
IUUC-Mmr-061716	Microcebus murinus	29.09	3.00e-51	195.00
IUUC-Mdo-062145	Monodelphis domestica	28.57	2.00e-15	76.30
IUUC-Mmu-064063	Mus musculus	29.28	1.00e-51	197.00
IUUC-Mpu-065850	Mustela putorius furo	28.44	3.00e-48	186.00
IUUC-Mlu-067977	Myotis lucifugus	29.28	2.00e-51	196.00
IUUC-Nle-070024	Nomascus leucogenys	29.09	5.00e-51	195.00
IUUC-Opr-070669	Ochotona princeps	26.62	5.00e-38	151.00
IUUC-Ont-072407	Oreochromis niloticus	29.12	3.00e-52	199.00
IUUC-Ocu-074755	Oryctolagus cuniculus	28.96	2.00e-16	79.70
IUUC-Ola-087564	Oryzias latipes	29.18	6.00e-52	197.00
IUUC-Oga-088503	Otolemur garnettii	29.09	3.00e-51	196.00
IUUC-Oar-090254	Ovis aries	29.09	2.00e-51	196.00
IUUC-Ptr-090811	Pan troglodytes	29.09	3.00e-51	195.00
IUUC-Pan-091906	Papio anubis	28.96	2.00e-16	79.70
IUUC-Psi-093869	Pelodiscus sinensis	29.28	1.00e-50	193.00
IUUC-Pma-094703	Petromyzon marinus	28.60	1.00e-49	190.00
IUUC-Pfo-097375	Poecilia formosa	29.52	1.00e-54	206.00
IUUC-Pab-098645	Pongo abelii	29.09	4.00e-51	195.00
IUUC-Pca-100931	Procavia capensis	26.65	2.00e-29	123.00
IUUC-Pva-102902	Pteropus vampyrus	29.09	2.00e-51	196.00
IUUC-Ptt-103991	Puccinia triticina	32.08	6.00e-01	28.50
IUUC-Rno-105725	Rattus norvegicus	29.28	2.00e-51	196.00
IUUC-Sce-106207	Saccharomyces cerevisiae	38.82	5.00e-11	61.60
IUUC-Sha-107008	Sarcophilus harrisii	28.82	4.00e-50	191.00
IUUC-Ssl-108594	Sclerotinia sclerotiorum	31.03	5.00e-06	46.60
IUUC-Smo-109236	Selaginella moellendorffii	25.46	1.00e-15	78.20
IUUC-Stu-112041	Solanum tuberosum	28.47	8.00e-08	51.20
IUUC-Sar-113710	Sorex araneus	24.12	1.00e-26	114.00
IUUC-Sre-115128	Sporisorium reilianum	31.03	3.00e-06	47.00
IUUC-Ssc-116271	Sus scrofa	29.09	3.00e-51	195.00
IUUC-Tgu-117051	Taeniopygia guttata	28.42	5.00e-16	78.60
IUUC-Tru-117706	Takifugu rubripes	27.95	2.00e-51	196.00
IUUC-Tsy-118886	Tarsius syrichta	29.09	6.00e-51	194.00
IUUC-Tni-120623	Tetraodon nigroviridis	30.04	2.00e-52	199.00
IUUC-Tbe-127618	Tupaia belangeri	45.61	1.00e-12	67.80
IUUC-Ttr-129058	Tursiops truncatus	29.09	3.00e-51	196.00
IUUC-Uma-129405	Ustilago maydis	31.03	5.00e-06	46.20
IUUC-Vpa-130327	Vicugna pacos	29.09	4.00e-51	195.00
IUUC-Xtr-132030	Xenopus tropicalis	28.02	3.00e-52	199.00
IUUC-Xma-134251	Xiphophorus maculatus	29.52	3.00e-54	205.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence