iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aml-001195

Ensembl Protein ID

ENSAMEP00000017959.1

UniProt Accession

G1MF30; G1MF30_AILME

Genbank Protein ID

ENSAMEP00000017959

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACTA01132165

Gene Name

RAD23B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMEG00000016970.1	ENSAMET00000018689.1	ENSAMEP00000017959.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	2.10e-19	69.1	192	229
ULD/UDP/UBQ/UBQ_PIM	9.50e-19	67.2	3	80

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           +e ++ ++++MG++re+++ aLra++nn+++AveyLl 
   Q: 192  YENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLM 229
           5789********************************95 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 3    ltvktlkgkefel..evseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           lt++t + k f+   e  +  +v++lKeki++e+g   +p++ qkLIyaGkiL+Ddt L+e++i+++++v+++v+k+k
   Q: 3    LTLRTINMKPFRCdnETYPTFKVKALKEKIESEKGkdaFPVAGQKLIYAGKILNDDTALKEYKIDEKNFVVVMVTKPK 80
           6777777777444336777789*****************************************************997 PP

Organism

Ailuropoda melanoleuca

Protein Sequence
(Fasta)

FHLTLRTINM KPFRCDNETY PTFKVKALKE KIESEKGKDA FPVAGQKLIY AGKILNDDTA 60
LKEYKIDEKN FVVVMVTKPK AVTTPAPATT QQSNPATTTT VSSSTAPAVA QAPAPAPTLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTCACCTAA CGCTCAGAAC TATCAACTTA GACAATTTTT AGAGGTATTC TGGGAAATAG 60
AAGGAATAGA ATTTTCCCTC TTGATTCTTG TGCCTTTAAA GTAATGAAAC TAGTTCCATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0071942--C:XPC complex
GO:0003684--F:damaged DNA binding
GO:0000715--P:nucleotide-excision repair, DNA damage recognition
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0007283--P:spermatogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003371	Anas platyrhynchos	72.44	3.00e-119	421.00
IUUC-Aca-004599	Anolis carolinensis	78.55	5.00e-91	328.00
IUUC-Aly-005498	Arabidopsis lyrata	40.49	8.00e-41	160.00
IUUC-Ath-006676	Arabidopsis thaliana	38.76	2.00e-40	160.00
IUUC-Acl-008212	Aspergillus clavatus	47.01	5.00e-19	88.60
IUUC-Afl-008605	Aspergillus flavus	44.12	2.00e-19	90.10
IUUC-Afu-008877	Aspergillus fumigatus	46.27	1.00e-18	87.00
IUUC-Aor-010032	Aspergillus oryzae	44.12	3.00e-19	89.40
IUUC-Ate-010458	Aspergillus terreus	39.92	2.00e-29	123.00
IUUC-Ame-011107	Astyanax mexicanus	67.96	1.00e-33	137.00
IUUC-Bta-012922	Bos taurus	90.20	1.00e-121	429.00
IUUC-Bci-013933	Botrytis cinerea	38.04	3.00e-23	102.00
IUUC-Bol-015641	Brassica oleracea	37.65	4.00e-40	158.00
IUUC-Bra-017983	Brassica rapa	37.65	2.00e-40	159.00
IUUC-Cja-018772	Callithrix jacchus	88.32	1.00e-128	452.00
IUUC-Cfa-020683	Canis familiaris	82.35	9.00e-128	449.00
IUUC-Cpo-022145	Cavia porcellus	84.43	1.00e-124	439.00
IUUC-Cre-022810	Chlamydomonas reinhardtii	37.04	1.00e-29	124.00
IUUC-Csa-023714	Chlorocebus sabaeus	88.56	3.00e-143	501.00
IUUC-Cho-024814	Choloepus hoffmanni	57.66	7.00e-86	310.00
IUUC-Cin-025741	Ciona intestinalis	42.01	3.00e-36	145.00
IUUC-Csv-025823	Ciona savignyi	35.96	2.00e-34	138.00
IUUC-Cne-027056	Cryptococcus neoformans	46.15	1.00e-12	67.40
IUUC-Cme-027260	Cyanidioschyzon merolae	26.14	2.00e-22	99.80
IUUC-Dre-028369	Danio rerio	71.20	4.00e-82	298.00
IUUC-Dno-029543	Dasypus novemcinctus	83.45	9.00e-122	429.00
IUUC-Dse-031336	Dothistroma septosporum	47.41	1.00e-17	84.00
IUUC-Ete-032583	Echinops telfairi	80.00	5.00e-63	234.00
IUUC-Eca-034243	Equus caballus	96.58	5.00e-95	340.00
IUUC-Eeu-034721	Erinaceus europaeus	89.40	4.00e-73	268.00
IUUC-Fca-035679	Felis catus	92.16	5.00e-127	447.00
IUUC-Fal-037148	Ficedula albicollis	73.59	6.00e-118	417.00
IUUC-Fox-037960	Fusarium oxysporum	43.28	1.00e-15	77.00
IUUC-Gmo-039080	Gadus morhua	62.92	3.00e-61	228.00
IUUC-Ggr-040116	Gaeumannomyces graminis	46.27	6.00e-16	78.60
IUUC-Gga-040544	Gallus gallus	72.94	2.00e-123	435.00
IUUC-Gma-043835	Glycine max	34.72	8.00e-40	157.00
IUUC-Ggo-045125	Gorilla gorilla	95.60	4.00e-100	358.00
IUUC-Hsa-046519	Homo sapiens	95.60	4.00e-100	358.00
IUUC-Hvu-047832	Hordeum vulgare	36.95	4.00e-35	142.00
IUUC-Itr-048295	Ictidomys tridecemlineatus	86.13	1.00e-115	409.00
IUUC-Kpa-049314	Komagataella pastoris	37.24	1.00e-29	123.00
IUUC-Lch-050553	Latimeria chalumnae	64.32	1.00e-97	349.00
IUUC-Lpe-051087	Leersia perrieri	35.80	7.00e-36	144.00
IUUC-Loc-051748	Lepisosteus oculatus	68.89	3.00e-74	271.00
IUUC-Laf-054293	Loxodonta africana	93.02	4.00e-119	421.00
IUUC-Mcc-055600	Macaca mulatta	95.83	2.00e-107	381.00
IUUC-Meu-056082	Macropus eugenii	66.18	5.00e-68	251.00
IUUC-Mor-057287	Magnaporthe oryzae	46.77	9.00e-15	74.30
IUUC-Mpo-057609	Magnaporthe poae	46.51	3.00e-15	75.90
IUUC-Mtr-058148	Medicago truncatula	37.84	2.00e-41	162.00
IUUC-Mla-058961	Melampsora laricipopulina	46.62	3.00e-26	112.00
IUUC-Mga-060060	Meleagris gallopavo	47.40	1.00e-27	117.00
IUUC-Mvi-060220	Microbotryum violaceum	43.61	2.00e-21	97.10
IUUC-Mmr-061159	Microcebus murinus	92.98	1.00e-93	336.00
IUUC-Mdo-061967	Monodelphis domestica	77.54	5.00e-108	384.00
IUUC-Mmu-063258	Mus musculus	83.49	2.00e-139	488.00
IUUC-Mac-065180	Musa acuminata	38.40	7.00e-39	154.00
IUUC-Mpu-066389	Mustela putorius furo	98.80	3.00e-96	345.00
IUUC-Mlu-067999	Myotis lucifugus	89.69	3.00e-119	421.00
IUUC-Nfi-068390	Neosartorya fischeri	46.27	1.00e-18	87.40
IUUC-Ncr-068685	Neurospora crassa	35.63	3.00e-33	135.00
IUUC-Nle-069655	Nomascus leucogenys	88.81	2.00e-137	481.00
IUUC-Opr-070234	Ochotona princeps	88.27	3.00e-30	125.00
IUUC-Ont-072484	Oreochromis niloticus	54.59	1.00e-93	336.00
IUUC-Ocu-074831	Oryctolagus cuniculus	90.94	3.00e-93	335.00
IUUC-Oba-074972	Oryza barthii	31.07	5.00e-43	167.00
IUUC-Obr-076909	Oryza brachyantha	35.66	3.00e-37	149.00
IUUC-Ogl-077021	Oryza glaberrima	33.98	1.00e-32	134.00
IUUC-Ogu-078883	Oryza glumaepatula	35.02	4.00e-33	135.00
IUUC-Oin-079203	Oryza indica	31.86	2.00e-47	182.00
IUUC-Olo-080559	Oryza longistaminata	30.73	1.00e-43	170.00
IUUC-Ome-081652	Oryza meridionalis	33.33	5.00e-33	135.00
IUUC-Oni-082812	Oryza nivara	31.33	1.00e-42	166.00
IUUC-Opu-083756	Oryza punctata	34.63	2.00e-33	136.00
IUUC-Oru-084942	Oryza rufipogon	31.46	4.00e-42	165.00
IUUC-Osa-085951	Oryza sativa	31.86	2.00e-47	182.00
IUUC-Ola-086540	Oryzias latipes	64.78	2.00e-65	243.00
IUUC-Olu-087843	Ostreococcus lucimarinus	41.48	2.00e-38	153.00
IUUC-Oga-088023	Otolemur garnettii	81.20	9.00e-123	433.00
IUUC-Oar-089964	Ovis aries	94.56	1.00e-117	416.00
IUUC-Ptr-091165	Pan troglodytes	95.60	7.00e-100	357.00
IUUC-Pan-092009	Papio anubis	87.92	3.00e-136	478.00
IUUC-Psi-093477	Pelodiscus sinensis	81.55	4.00e-88	318.00
IUUC-Pno-095064	Phaeosphaeria nodorum	46.72	3.00e-13	69.70
IUUC-Ppa-095964	Physcomitrella patens	43.61	1.00e-27	117.00
IUUC-Pfo-097385	Poecilia formosa	61.57	2.00e-71	262.00
IUUC-Pab-097868	Pongo abelii	95.60	3.00e-99	354.00
IUUC-Pop-099642	Populus trichocarpa	33.82	5.00e-49	188.00
IUUC-Pca-100652	Procavia capensis	92.00	5.00e-67	248.00
IUUC-Pva-102137	Pteropus vampyrus	96.69	3.00e-100	358.00
IUUC-Ptt-103717	Puccinia triticina	45.93	2.00e-25	110.00
IUUC-Pte-104303	Pyrenophora teres	50.00	1.00e-19	90.90
IUUC-Pyt-104580	Pyrenophora triticirepentis	49.64	1.00e-19	90.50
IUUC-Rno-104844	Rattus norvegicus	84.65	1.00e-141	496.00
IUUC-Sce-106214	Saccharomyces cerevisiae	35.77	7.00e-13	68.20
IUUC-Sha-107073	Sarcophilus harrisii	81.79	6.00e-106	377.00
IUUC-Sja-107851	Schizosaccharomyces japonicus	40.54	1.00e-38	153.00
IUUC-Spo-108298	Schizosaccharomyces pombe	42.21	4.00e-38	151.00
IUUC-Ssl-108382	Sclerotinia sclerotiorum	43.75	7.00e-17	81.30
IUUC-Sar-112925	Sorex araneus	87.50	7.00e-90	323.00
IUUC-Ssc-116329	Sus scrofa	96.20	3.00e-101	361.00
IUUC-Tgu-116918	Taeniopygia guttata	71.84	2.00e-121	429.00
IUUC-Tru-118651	Takifugu rubripes	60.69	2.00e-72	266.00
IUUC-Tsy-118836	Tarsius syrichta	99.26	8.00e-49	187.00
IUUC-Tca-121661	Theobroma cacao	37.02	2.00e-37	149.00
IUUC-Tvi-122617	Trichoderma virens	46.51	2.00e-16	79.70
IUUC-Tae-124646	Triticum aestivum	36.51	1.00e-32	133.00
IUUC-Tme-127092	Tuber melanosporum	32.90	1.00e-21	97.40
IUUC-Tbe-127493	Tupaia belangeri	79.26	8.00e-67	247.00
IUUC-Ttr-128464	Tursiops truncatus	95.82	4.00e-101	361.00
IUUC-Uma-129484	Ustilago maydis	53.06	3.00e-11	63.20
IUUC-Vda-129946	Verticillium dahliae	47.01	2.00e-17	83.60
IUUC-Vpa-130357	Vicugna pacos	91.12	2.00e-88	318.00
IUUC-Vvi-130842	Vitis vinifera	35.83	2.00e-38	153.00
IUUC-Xtr-132679	Xenopus tropicalis	76.17	2.00e-68	252.00
IUUC-Xma-133503	Xiphophorus maculatus	51.28	2.00e-93	335.00
IUUC-Yli-134615	Yarrowia lipolytica	42.79	2.00e-38	153.00
IUUC-Zma-135929	Zea mays	30.95	8.00e-45	174.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence