iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bta-013460

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

DAAA02041566

Gene Name

PHF21A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000009611.4	ENSBTAT00000012652.4	ENSBTAP00000012652.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.60e-10	40.5	437	482

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C vC+++g+    l++C+ C++++H +Cl ++  ++ p+   wiCp+C++
   Q: 437  DFCSVCRKSGQ----LLMCDTCSRVYHLDCLDPP-LKTIPKGM-WICPRCQD 482
           79*********....*******************.*******7.******85 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

KRVVEQLRKN LIVKQEQPDK FQIQPLPQSE NKLQTAQQQP LQQLQQQQHH HHHAQAAASS 60
PGLTAPQKTV TTASMITTKT LPLVLKAATA TMPASVVGQR PTIAMVTAIN SQKAVLSTDV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAGAGTAG TTGAACAGCT ACGGAAGAAC CTGATAGTAA AGCAAGAACA ACCAGACAAG 60
TTCCAAATAC AGCCATTGCC ACAGTCTGAA AACAAACTAC AAACAGCACA GCAGCAGCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:1990391--C:DNA repair complex
GO:0000118--C:histone deacetylase complex
GO:0003682--F:chromatin binding
GO:0042393--F:histone binding
GO:0000977--F:RNA polymerase II regulatory region sequence-specific DNA binding
GO:0003712--F:transcription cofactor activity
GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001656	Ailuropoda melanoleuca	94.30	0.00e+00	1025.00
IUUC-Atr-002930	Amborella trichopoda	45.61	9.00e-10	59.30
IUUC-Apl-003874	Anas platyrhynchos	87.24	0.00e+00	944.00
IUUC-Aca-004684	Anolis carolinensis	86.02	0.00e+00	696.00
IUUC-Ame-010638	Astyanax mexicanus	65.65	3.00e-126	446.00
IUUC-Bgr-012025	Blumeria graminis	38.89	8.00e-09	56.60
IUUC-Cja-019170	Callithrix jacchus	94.47	0.00e+00	1019.00
IUUC-Cfa-020760	Canis familiaris	94.15	0.00e+00	1024.00
IUUC-Cpo-021549	Cavia porcellus	94.48	0.00e+00	989.00
IUUC-Csa-023461	Chlorocebus sabaeus	95.60	0.00e+00	895.00
IUUC-Dre-027928	Danio rerio	54.21	8.00e-127	447.00
IUUC-Dno-029450	Dasypus novemcinctus	94.74	0.00e+00	857.00
IUUC-Dor-030699	Dipodomys ordii	93.99	0.00e+00	1019.00
IUUC-Ete-033073	Echinops telfairi	78.83	0.00e+00	758.00
IUUC-Eca-033822	Equus caballus	93.35	0.00e+00	1010.00
IUUC-Fca-035562	Felis catus	93.84	0.00e+00	1016.00
IUUC-Fal-037269	Ficedula albicollis	86.77	0.00e+00	938.00
IUUC-Gmo-038592	Gadus morhua	56.66	1.00e-121	430.00
IUUC-Gga-040795	Gallus gallus	87.09	0.00e+00	943.00
IUUC-Gac-042224	Gasterosteus aculeatus	58.53	3.00e-147	514.00
IUUC-Ggo-045327	Gorilla gorilla	94.32	0.00e+00	1015.00
IUUC-Hsa-046675	Homo sapiens	94.47	0.00e+00	1020.00
IUUC-Itr-048946	Ictidomys tridecemlineatus	94.81	0.00e+00	650.00
IUUC-Lch-050609	Latimeria chalumnae	73.36	0.00e+00	676.00
IUUC-Loc-052407	Lepisosteus oculatus	75.19	0.00e+00	663.00
IUUC-Laf-053876	Loxodonta africana	94.01	0.00e+00	1010.00
IUUC-Mcc-054954	Macaca mulatta	90.88	0.00e+00	976.00
IUUC-Meu-056821	Macropus eugenii	83.70	0.00e+00	918.00
IUUC-Mtr-058324	Medicago truncatula	40.58	3.00e-10	61.20
IUUC-Mga-059320	Meleagris gallopavo	87.22	0.00e+00	946.00
IUUC-Mmr-061278	Microcebus murinus	89.47	0.00e+00	965.00
IUUC-Mdo-062891	Monodelphis domestica	87.25	0.00e+00	978.00
IUUC-Mmu-063907	Mus musculus	89.72	0.00e+00	969.00
IUUC-Mac-065599	Musa acuminata	39.44	4.00e-11	63.50
IUUC-Mpu-065839	Mustela putorius furo	93.04	0.00e+00	1016.00
IUUC-Mlu-068142	Myotis lucifugus	94.15	0.00e+00	1015.00
IUUC-Ncr-068727	Neurospora crassa	42.86	2.00e-10	62.40
IUUC-Nle-069423	Nomascus leucogenys	94.01	0.00e+00	1013.00
IUUC-Opr-070236	Ochotona princeps	85.84	0.00e+00	815.00
IUUC-Ont-071327	Oreochromis niloticus	60.20	9.00e-125	440.00
IUUC-Oan-073405	Ornithorhynchus anatinus	96.00	0.00e+00	918.00
IUUC-Ocu-074391	Oryctolagus cuniculus	93.05	0.00e+00	1002.00
IUUC-Ola-086548	Oryzias latipes	58.28	8.00e-146	510.00
IUUC-Oga-088488	Otolemur garnettii	94.16	0.00e+00	1012.00
IUUC-Oar-090334	Ovis aries	97.63	0.00e+00	1009.00
IUUC-Ptr-091018	Pan troglodytes	94.47	0.00e+00	1020.00
IUUC-Psi-093596	Pelodiscus sinensis	89.36	0.00e+00	862.00
IUUC-Pma-094616	Petromyzon marinus	63.80	1.00e-98	352.00
IUUC-Pfo-097233	Poecilia formosa	57.25	4.00e-129	455.00
IUUC-Pab-097801	Pongo abelii	94.16	0.00e+00	1015.00
IUUC-Pop-099691	Populus trichocarpa	44.29	1.00e-11	65.10
IUUC-Ppe-101956	Prunus persica	47.83	3.00e-13	70.10
IUUC-Pva-102419	Pteropus vampyrus	94.47	0.00e+00	1016.00
IUUC-Rno-104900	Rattus norvegicus	90.74	0.00e+00	996.00
IUUC-Sha-107328	Sarcophilus harrisii	91.54	0.00e+00	971.00
IUUC-Sar-113573	Sorex araneus	98.33	0.00e+00	747.00
IUUC-Ssc-115924	Sus scrofa	98.49	0.00e+00	950.00
IUUC-Tgu-117422	Taeniopygia guttata	87.22	0.00e+00	948.00
IUUC-Tru-118697	Takifugu rubripes	74.81	1.00e-100	360.00
IUUC-Tsy-119092	Tarsius syrichta	93.77	9.00e-173	600.00
IUUC-Tni-120185	Tetraodon nigroviridis	61.41	1.00e-127	450.00
IUUC-Tca-121730	Theobroma cacao	42.86	1.00e-10	62.40
IUUC-Ttr-128860	Tursiops truncatus	95.58	0.00e+00	1020.00
IUUC-Vpa-130333	Vicugna pacos	90.13	0.00e+00	966.00
IUUC-Xtr-131763	Xenopus tropicalis	74.53	0.00e+00	712.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence