iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ptr-091672

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AC183799

Gene Name

TRIM50

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000019269.2	ENSPTRT00000035621.2	ENSPTRP00000032928.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-07	32.1	16	57
E3 activity/RING/U-box	3.10e-08	33.6	12	77

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle fk+ pl l+CgH +++ Cl   + l++    e rCP+Cr
   Q: 16   CPICLEVFKE-PLMLQCGHSYCKGCL---VSLSCHLDAELRCPVCR 57
           ********99.999************...677999**********8 PP

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssI...ekwlasggktcPvtrqplteedlvPnltlrrliqa 67
           + + CpI le++++P +l++G++y + ++     +l+   + cPv+rq ++ ++  Pn +l r+i+a
   Q: 12   DRLQCPICLEVFKEPLMLQCGHSYCKGCLvslSCHLDAELR-CPVCRQAVDGSSSPPNVSLARVIEA 77
           5689*********************9876111567788877.**********************987 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MAWQVSLPEL EDRLQCPICL EVFKEPLMLQ CGHSYCKGCL VSLSCHLDAE LRCPVCRQAV 60
DGSSSPPNVS LARVIEALRL PGDPEPKVCV HHRNPLSLFC EKDQELICGL CGLLGSHQHH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAGCATGAT GGGGCACGCG CGGTAGCGCG AGGCGGGGCA TGTAACCATA GCGTGCCGGT 60
CATGATGAGG CACGGACGTG GGGGGGGCAC GTAATCGGAG CTCGCGGGGC AGGATGGGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR006574--PRY
IPR003877--SPRY_dom
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13765--PRY
PF00622--SPRY
PF00643--zf-B_box
PF13445--zf-RING_UBOX

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00589--PRY
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005829--C:cytosol
GO:0008270--F:zinc ion binding

KEGG

ptr:107966165; ptr:472403

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001406	Ailuropoda melanoleuca	90.76	0.00e+00	887.00
IUUC-Apl-004051	Anas platyrhynchos	62.50	4.00e-177	613.00
IUUC-Ame-010964	Astyanax mexicanus	53.91	1.00e-154	539.00
IUUC-Bta-012642	Bos taurus	91.47	0.00e+00	888.00
IUUC-Cja-019011	Callithrix jacchus	93.13	0.00e+00	867.00
IUUC-Cfa-020270	Canis familiaris	89.32	0.00e+00	883.00
IUUC-Cpo-022458	Cavia porcellus	89.96	0.00e+00	880.00
IUUC-Csa-023478	Chlorocebus sabaeus	97.34	0.00e+00	947.00
IUUC-Cne-027043	Cryptococcus neoformans	50.00	6.00e-06	45.40
IUUC-Dno-028894	Dasypus novemcinctus	89.46	0.00e+00	859.00
IUUC-Dor-030228	Dipodomys ordii	85.38	0.00e+00	738.00
IUUC-Eca-033497	Equus caballus	91.58	0.00e+00	895.00
IUUC-Eeu-034910	Erinaceus europaeus	76.67	3.00e-134	471.00
IUUC-Fca-036164	Felis catus	90.97	0.00e+00	893.00
IUUC-Gga-040573	Gallus gallus	56.46	5.00e-99	355.00
IUUC-Ggo-044471	Gorilla gorilla	99.59	0.00e+00	967.00
IUUC-Hsa-046039	Homo sapiens	99.18	0.00e+00	962.00
IUUC-Itr-048897	Ictidomys tridecemlineatus	89.59	0.00e+00	853.00
IUUC-Lch-050638	Latimeria chalumnae	56.90	6.00e-165	573.00
IUUC-Loc-051971	Lepisosteus oculatus	54.74	4.00e-152	531.00
IUUC-Laf-054291	Loxodonta africana	90.62	0.00e+00	872.00
IUUC-Mcc-055708	Macaca mulatta	97.34	0.00e+00	947.00
IUUC-Meu-056670	Macropus eugenii	71.47	4.00e-140	491.00
IUUC-Mla-059039	Melampsora laricipopulina	43.08	4.00e-09	56.20
IUUC-Mga-059415	Meleagris gallopavo	60.99	2.00e-177	615.00
IUUC-Mmr-061410	Microcebus murinus	93.33	0.00e+00	873.00
IUUC-Mmu-064094	Mus musculus	89.34	0.00e+00	863.00
IUUC-Mpu-065781	Mustela putorius furo	89.12	0.00e+00	868.00
IUUC-Mlu-067974	Myotis lucifugus	90.41	0.00e+00	877.00
IUUC-Nle-069000	Nomascus leucogenys	97.95	0.00e+00	954.00
IUUC-Opr-071216	Ochotona princeps	90.23	1.00e-114	406.00
IUUC-Ocu-074859	Oryctolagus cuniculus	88.60	0.00e+00	853.00
IUUC-Oga-088285	Otolemur garnettii	90.55	0.00e+00	890.00
IUUC-Oar-090161	Ovis aries	82.58	0.00e+00	789.00
IUUC-Pan-092870	Papio anubis	97.54	0.00e+00	948.00
IUUC-Psi-093742	Pelodiscus sinensis	66.03	0.00e+00	656.00
IUUC-Pab-098034	Pongo abelii	98.77	0.00e+00	959.00
IUUC-Pca-100115	Procavia capensis	81.21	2.00e-70	258.00
IUUC-Pva-103234	Pteropus vampyrus	91.04	0.00e+00	882.00
IUUC-Rno-105163	Rattus norvegicus	88.70	0.00e+00	844.00
IUUC-Sha-106575	Sarcophilus harrisii	64.14	1.00e-155	542.00
IUUC-Ssc-115600	Sus scrofa	91.17	0.00e+00	892.00
IUUC-Tbe-128151	Tupaia belangeri	92.93	3.00e-99	353.00
IUUC-Ttr-128947	Tursiops truncatus	90.55	0.00e+00	873.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence