iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C e +  +d +++lpC H+fh++C+  w         + +CP C+
   Q: 277  CAVCIEGYkpSDVVRILPCRHLFHKSCVDPW------LLDHRTCPMCK 318
           ******9977777******************......9999******6 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MTMSLIQACR SLALSTWLLS FCFVHLLCLD FTVAEKEEWY TAFVNITYTE PESGAAVAGG 60
GGGAELHTEK SECGRYGEHS PKQDARGEVV MASSVHDRLA CDPNTKFAAP AHGKHWIALI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCGCAGCGA CAGGACGACC AGAGCGGTGG CCCGGGGTTG GCCCGGGCAG AGAAAGGAGG 60
GACGGAGCGT GGGGAGGGCG CAGGGGGCGG GGAGAGGACC CCGGAGGAGA GAGATGACAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR003137--PA_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF02225--PA
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

rno:364983

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001200	Ailuropoda melanoleuca	93.59	0.00e+00	802.00
IUUC-Apl-003591	Anas platyrhynchos	81.20	0.00e+00	626.00
IUUC-Aca-005079	Anolis carolinensis	81.96	0.00e+00	713.00
IUUC-Afl-008635	Aspergillus flavus	31.96	8.00e-11	59.70
IUUC-Aor-010099	Aspergillus oryzae	31.96	8.00e-11	59.70
IUUC-Ame-011502	Astyanax mexicanus	73.62	7.00e-174	603.00
IUUC-Bra-017579	Brassica rapa	37.97	8.00e-14	70.10
IUUC-Cel-018489	Caenorhabditis elegans	62.20	2.00e-46	179.00
IUUC-Cja-019787	Callithrix jacchus	93.15	0.00e+00	801.00
IUUC-Cfa-020032	Canis familiaris	90.08	0.00e+00	676.00
IUUC-Cpo-021302	Cavia porcellus	96.03	8.00e-149	519.00
IUUC-Cin-025124	Ciona intestinalis	42.97	2.00e-56	212.00
IUUC-Csv-026229	Ciona savignyi	40.00	1.00e-58	220.00
IUUC-Cme-027309	Cyanidioschyzon merolae	47.46	4.00e-11	63.90
IUUC-Dre-027387	Danio rerio	68.60	4.00e-162	563.00
IUUC-Dno-029556	Dasypus novemcinctus	92.69	0.00e+00	798.00
IUUC-Dme-032142	Drosophila melanogaster	43.18	1.00e-59	224.00
IUUC-Ete-032463	Echinops telfairi	81.01	1.00e-143	502.00
IUUC-Eca-034072	Equus caballus	94.08	0.00e+00	809.00
IUUC-Fal-036944	Ficedula albicollis	82.45	0.00e+00	674.00
IUUC-Gmo-038987	Gadus morhua	76.75	8.00e-131	460.00
IUUC-Gga-040384	Gallus gallus	83.79	0.00e+00	728.00
IUUC-Gac-041902	Gasterosteus aculeatus	57.99	3.00e-143	501.00
IUUC-Gma-043459	Glycine max	28.26	3.00e-13	68.90
IUUC-Ggo-044815	Gorilla gorilla	88.13	0.00e+00	743.00
IUUC-Hsa-046593	Homo sapiens	92.69	0.00e+00	796.00
IUUC-Lch-050560	Latimeria chalumnae	79.78	3.00e-119	421.00
IUUC-Loc-052693	Lepisosteus oculatus	79.73	0.00e+00	683.00
IUUC-Laf-054210	Loxodonta africana	91.57	0.00e+00	785.00
IUUC-Mcc-055247	Macaca mulatta	84.47	0.00e+00	733.00
IUUC-Meu-056255	Macropus eugenii	72.75	8.00e-130	456.00
IUUC-Mla-058935	Melampsora laricipopulina	37.66	1.00e-08	54.70
IUUC-Mga-059708	Meleagris gallopavo	89.89	6.00e-139	486.00
IUUC-Mmr-061307	Microcebus murinus	93.72	0.00e+00	734.00
IUUC-Mdo-062435	Monodelphis domestica	91.70	8.00e-142	496.00
IUUC-Mmu-063508	Mus musculus	97.71	0.00e+00	832.00
IUUC-Mpu-066007	Mustela putorius furo	92.47	0.00e+00	798.00
IUUC-Mlu-067534	Myotis lucifugus	95.67	2.00e-148	517.00
IUUC-Nle-069110	Nomascus leucogenys	92.92	0.00e+00	800.00
IUUC-Opr-070206	Ochotona princeps	87.21	0.00e+00	733.00
IUUC-Ont-071559	Oreochromis niloticus	68.04	4.00e-169	587.00
IUUC-Ocu-074084	Oryctolagus cuniculus	91.99	0.00e+00	791.00
IUUC-Ola-086771	Oryzias latipes	68.12	1.00e-85	308.00
IUUC-Oga-088326	Otolemur garnettii	93.14	0.00e+00	803.00
IUUC-Oar-089501	Ovis aries	92.95	0.00e+00	814.00
IUUC-Ptr-091498	Pan troglodytes	93.84	0.00e+00	802.00
IUUC-Pan-091866	Papio anubis	96.28	6.00e-145	506.00
IUUC-Psi-094085	Pelodiscus sinensis	86.21	0.00e+00	688.00
IUUC-Pma-094718	Petromyzon marinus	64.33	7.00e-98	350.00
IUUC-Pfo-097029	Poecilia formosa	64.53	6.00e-151	527.00
IUUC-Pab-098039	Pongo abelii	93.39	0.00e+00	796.00
IUUC-Pca-100787	Procavia capensis	92.24	0.00e+00	798.00
IUUC-Ppe-101190	Prunus persica	35.00	4.00e-13	69.70
IUUC-Pva-102884	Pteropus vampyrus	93.36	0.00e+00	798.00
IUUC-Sha-106655	Sarcophilus harrisii	87.85	8.00e-120	422.00
IUUC-Sar-113043	Sorex araneus	89.84	9.00e-157	545.00
IUUC-Ssc-116062	Sus scrofa	96.28	1.00e-144	505.00
IUUC-Tgu-117497	Taeniopygia guttata	81.45	0.00e+00	691.00
IUUC-Tru-117952	Takifugu rubripes	68.52	7.00e-166	576.00
IUUC-Tsy-119460	Tarsius syrichta	95.29	3.00e-158	550.00
IUUC-Tni-119659	Tetraodon nigroviridis	73.07	1.00e-142	499.00
IUUC-Tur-126504	Triticum urartu	38.30	2.00e-13	69.30
IUUC-Tbe-127574	Tupaia belangeri	79.68	2.00e-130	458.00
IUUC-Ttr-128435	Tursiops truncatus	95.00	5.00e-160	557.00
IUUC-Vpa-130737	Vicugna pacos	94.93	1.00e-145	508.00
IUUC-Xtr-132504	Xenopus tropicalis	81.96	0.00e+00	708.00
IUUC-Xma-133970	Xiphophorus maculatus	64.07	8.00e-150	523.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence