iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Oga-087913

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03145164

Gene Name

WDR88

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000004017.2	ENSOGAT00000004021.2	ENSOGAP00000003579.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.60e-39	129.7	71	108
UBD/Beta-Prp	7.80e-55	186.1	193	365

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvll 36
           gH+  v++++f  +dt l+sGs+D t+k+WD  +g l+
   Q: 71   GHQHIVSSCHFcvDDTKLLSGSHDYTVKLWDAADGSLI 108
           89**********777****************9888765 PP

UBD/Beta-Prp

   S: 2    iktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseDrtikvwdls......t 83
           i+ +k+hh++ +t+ +f pd++ +a+ s d++ik+wd+t + +l s+ + h+++++ ++f  +g +l t+s D+ +k+w++        
   Q: 193  IALIKDHHSKSVTACCFDPDSQKVASVSLDRCIKIWDMTAQATLLSIpKAHSNAISNCCFTFSGHFLCTCSWDKSLKIWNIHtgefrnR 281
           56799***************************************9999*********************************98889889 PP
   S: 84   gkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlkt 168
           g cv  ++ghe s+ s+ f +++++l+sG+ drt+ +wd+ +g+     l+gh+++v+ v+++ +++ + s+s+Drt+rlWd+++
   Q: 282  GACVTLMQGHEGSISSCYFARDNSFLISGGLDRTVAIWDVGEGYRKL-SLKGHNDWVMDVAISNNKKWVLSASKDRTLRLWDIEN 365
           99*********************************************.**********************************975 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

RLPWRTLLKV LGCFRLSIPR MRQKTQLLVA CDPLALETKQ QPSRRKRFEP EKSVWGEPES 60
LSKIPFKVLR GHQHIVSSCH FCVDDTKLLS GSHDYTVKLW DAADGSLIRD FEPQPQAPIL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGCTTCCCT GGAGGACCCT GCTGAAAGTC TTGGGATGCT TCAGGCTGTC GATCCCCAGG 60
ATGCGCCAAA AAACCCAGCT GCTGGTTGCC TGTGACCCTC TAGCCTTGGA GACGAAGCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001328	Ailuropoda melanoleuca	72.15	3.00e-140	491.00
IUUC-Apl-003571	Anas platyrhynchos	54.02	4.00e-117	414.00
IUUC-Aca-005232	Anolis carolinensis	49.21	2.00e-75	275.00
IUUC-Ame-011833	Astyanax mexicanus	50.00	2.00e-51	194.00
IUUC-Bta-013562	Bos taurus	72.00	5.00e-169	587.00
IUUC-Cja-019202	Callithrix jacchus	70.45	0.00e+00	630.00
IUUC-Cfa-021095	Canis familiaris	66.75	2.00e-164	572.00
IUUC-Cpo-022170	Cavia porcellus	69.34	2.00e-172	598.00
IUUC-Csa-024218	Chlorocebus sabaeus	73.52	0.00e+00	653.00
IUUC-Cho-024561	Choloepus hoffmanni	72.26	2.00e-122	431.00
IUUC-Dno-029722	Dasypus novemcinctus	69.15	3.00e-151	528.00
IUUC-Dor-030464	Dipodomys ordii	64.29	3.00e-128	451.00
IUUC-Ete-032931	Echinops telfairi	57.63	5.00e-107	380.00
IUUC-Eca-034428	Equus caballus	73.31	3.00e-165	574.00
IUUC-Eeu-034568	Erinaceus europaeus	55.76	2.00e-106	378.00
IUUC-Fca-035707	Felis catus	66.99	6.00e-163	566.00
IUUC-Gmo-039646	Gadus morhua	46.30	4.00e-74	271.00
IUUC-Gga-040710	Gallus gallus	54.44	4.00e-113	400.00
IUUC-Ggo-044611	Gorilla gorilla	67.52	1.00e-92	333.00
IUUC-Hsa-046138	Homo sapiens	71.90	0.00e+00	635.00
IUUC-Itr-048283	Ictidomys tridecemlineatus	65.30	6.00e-158	550.00
IUUC-Lch-050329	Latimeria chalumnae	49.57	1.00e-105	376.00
IUUC-Loc-052876	Lepisosteus oculatus	38.69	6.00e-31	126.00
IUUC-Laf-053777	Loxodonta africana	68.27	9.00e-171	592.00
IUUC-Mcc-055771	Macaca mulatta	73.29	0.00e+00	650.00
IUUC-Meu-056584	Macropus eugenii	46.96	7.00e-82	296.00
IUUC-Mga-059818	Meleagris gallopavo	51.82	5.00e-118	417.00
IUUC-Mmr-060639	Microcebus murinus	71.84	3.00e-158	550.00
IUUC-Mdo-062321	Monodelphis domestica	56.40	4.00e-133	467.00
IUUC-Mpu-066849	Mustela putorius furo	66.91	9.00e-165	572.00
IUUC-Mlu-067238	Myotis lucifugus	64.49	4.00e-159	554.00
IUUC-Ont-071230	Oreochromis niloticus	42.43	8.00e-79	287.00
IUUC-Oan-072698	Ornithorhynchus anatinus	58.07	2.00e-136	478.00
IUUC-Ocu-074219	Oryctolagus cuniculus	71.12	5.00e-164	570.00
IUUC-Oar-089977	Ovis aries	73.37	8.00e-170	589.00
IUUC-Ptr-090876	Pan troglodytes	72.62	0.00e+00	642.00
IUUC-Pan-091936	Papio anubis	79.66	3.00e-115	407.00
IUUC-Psi-093015	Pelodiscus sinensis	50.40	1.00e-72	265.00
IUUC-Pma-094552	Petromyzon marinus	33.88	1.00e-30	125.00
IUUC-Pfo-096240	Poecilia formosa	41.51	4.00e-73	270.00
IUUC-Pab-097983	Pongo abelii	65.24	2.00e-159	555.00
IUUC-Pca-100752	Procavia capensis	55.50	6.00e-131	460.00
IUUC-Pva-102199	Pteropus vampyrus	62.68	6.00e-156	543.00
IUUC-Rno-106062	Rattus norvegicus	61.26	3.00e-157	548.00
IUUC-Sar-113167	Sorex araneus	44.60	1.00e-31	129.00
IUUC-Ssc-116089	Sus scrofa	67.15	5.00e-164	570.00
IUUC-Tbe-127860	Tupaia belangeri	61.83	2.00e-153	535.00
IUUC-Ttr-129152	Tursiops truncatus	71.88	2.00e-163	568.00
IUUC-Vpa-130745	Vicugna pacos	63.40	3.00e-159	555.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence