iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007404

Ensembl Protein ID

AT5G67060.1

UniProt Accession

Q9FHA7; HEC1_ARATH

Genbank Protein ID

AAM10961.1; BAB10940.1; AED98296.1; BAF00816.1

Protein Name

Transcription factor HEC1; Basic helix-loop-helix protein 88; Protein HECATE 1; Transcription factor EN 118; bHLH transcription factor bHLH088

Genbank Nucleotide ID

AF488618; AB020742; CP002688; AK228927

Gene Name

HEC1; BHLH88; EN118; At5g67060; K21H1.2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT5G67060	AT5G67060.1	AT5G67060.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
PINA	HINT	Mentha
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
ULD/UDP/UBQ/UBQ_Other	40.00	8.80e-01	28.50	IUUC-Sce-106452

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis thaliana

Functional Description
(View)

Required for the female reproductive tract development and fertility.

Protein Sequence
(Fasta)

MDSDIMNMMM HQMEKLPEFC NPNSSFFSPD HNNTYPFLFN STHYQSDHSM TNEPGFRYGS 60
GLLTNPSSIS PNTAYSSVFL DKRNNSNNNN NGTNMAAMRE MIFRIAVMQP IHIDPEAVKP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTCTTGTTG TATACTATTG CTTGAGTTCT GATTGGGCAC AGTAGTACCA TTGCCATTTC 60
TCTCACACAT ACCGTCTCTT TCTCTCATCA TCAATCATCA ATCATCCAAA AGAAAAAACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0217--Developmental protein
KW-0238--DNA-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR011598--bHLH_dom

PROSITE

PS50888--BHLH

Pfam

PF00010--HLH

SMART

SM00353--HLH

Gene Ontology

GO:0005634--C:nucleus
GO:0043565--F:sequence-specific DNA binding
GO:0003700--F:transcription factor activity, sequence-specific DNA binding
GO:0048462--P:carpel formation
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0010468--P:regulation of gene expression
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated
GO:0010500--P:transmitting tissue development

KEGG

ath:AT5G67060

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-044285	Glycine max	42.86	4.40e-02	30.80
IUUC-Sce-106452	Saccharomyces cerevisiae	40.00	2.70e-01	30.40

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence