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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Rno-105066
UUCD1 version UUC-RaN-00832
Ensembl Protein ID ENSRNOP00000006860.3
UniProt Accession Q5FVP5; WDR89_RAT
Genbank Protein ID AAH89849.1
Protein Name WD repeat-containing protein 89
Genbank Nucleotide ID BC089849
Gene Name Wdr89
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000021628.3 ENSRNOT00000006860.4 ENSRNOP00000006860.3
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
microRNATRANSFACRAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 4.10e-18 65.1 167 201
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           +H+d++t ++f  s+ +++vsGs Dg + v+Dl+ 
   Q: 167  THSDDITQVRFhpSNpNMVVSGSTDGLVNVFDLSV 201
           5***********9778****************965 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MEKIKDQFAN LHILRRSSEP KEPTYLLGID TSKTVPAEKG GLVAVLCSNG SIRIYDKETL 60
NLLREFSGSP GLLNGVRFAN SCDNVYSAST DGTVKCWDAR LASEKPAQLF KGYPSNIFIS 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105066|E3,WD_repeat|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AGCTCACAGG TGCTCTCCAC AGCCGGGCCG GAAGCTTTGC GATAACTGCC ACAGGGCAAC 60
CTTTCTCCAA AGTTTCCCGT GCTTATGTGT AAGAAGAGTA AACCCTGAGG TCAGACTCTG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105066|E3,WD_repeat|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
KEGG rno:314243
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000596 Aegilops tauschii 31.64 1.00e-34 140.00
IUUC-Aml-001254 Ailuropoda melanoleuca 83.72 0.00e+00 684.00
IUUC-Atr-003047 Amborella trichopoda 26.90 5.00e-20 92.00
IUUC-Apl-003479 Anas platyrhynchos 65.12 1.00e-152 532.00
IUUC-Aca-004537 Anolis carolinensis 61.66 3.00e-138 484.00
IUUC-Aly-006050 Arabidopsis lyrata 27.30 5.00e-24 105.00
IUUC-Ath-007363 Arabidopsis thaliana 27.54 1.00e-23 103.00
IUUC-Ago-007711 Ashbya gossypii 27.71 5.00e-20 92.00
IUUC-Acl-008076 Aspergillus clavatus 26.14 4.00e-20 92.40
IUUC-Afl-008448 Aspergillus flavus 35.33 1.00e-18 88.20
IUUC-Ani-009327 Aspergillus nidulans 27.17 6.00e-24 104.00
IUUC-Ang-009652 Aspergillus niger 28.75 7.00e-23 101.00
IUUC-Aor-009897 Aspergillus oryzae 34.67 1.00e-18 86.70
IUUC-Ame-011078 Astyanax mexicanus 46.41 2.00e-90 325.00
IUUC-Bgr-012252 Blumeria graminis 30.58 1.00e-30 127.00
IUUC-Bta-012703 Bos taurus 81.65 0.00e+00 639.00
IUUC-Bci-013979 Botrytis cinerea 30.59 2.00e-24 106.00
IUUC-Bdi-014266 Brachypodium distachyon 29.21 1.00e-28 120.00
IUUC-Bol-015632 Brassica oleracea 31.07 1.00e-15 75.90
IUUC-Bra-016730 Brassica rapa 27.48 2.00e-24 107.00
IUUC-Cja-019235 Callithrix jacchus 81.91 0.00e+00 655.00
IUUC-Cfa-020750 Canis familiaris 82.95 0.00e+00 669.00
IUUC-Cpo-021566 Cavia porcellus 74.42 8.00e-170 589.00
IUUC-Csa-023742 Chlorocebus sabaeus 82.17 0.00e+00 661.00
IUUC-Cho-024447 Choloepus hoffmanni 73.51 5.00e-165 573.00
IUUC-Cgl-026483 Colletotrichum gloeosporioides 31.52 9.00e-26 110.00
IUUC-Cne-026996 Cryptococcus neoformans 25.87 9.00e-14 71.60
IUUC-Dre-028760 Danio rerio 44.39 4.00e-93 334.00
IUUC-Dno-028909 Dasypus novemcinctus 81.61 0.00e+00 640.00
IUUC-Dor-030224 Dipodomys ordii 84.77 5.00e-133 466.00
IUUC-Dse-031410 Dothistroma septosporum 29.58 4.00e-23 102.00
IUUC-Dme-031947 Drosophila melanogaster 30.54 4.00e-32 132.00
IUUC-Eca-034117 Equus caballus 84.24 0.00e+00 687.00
IUUC-Eeu-035227 Erinaceus europaeus 78.81 0.00e+00 647.00
IUUC-Fca-036221 Felis catus 82.17 0.00e+00 663.00
IUUC-Fal-037285 Ficedula albicollis 58.46 3.00e-127 448.00
IUUC-Fox-037865 Fusarium oxysporum 29.39 2.00e-23 103.00
IUUC-Fso-038466 Fusarium solani 30.62 9.00e-28 117.00
IUUC-Ggr-040120 Gaeumannomyces graminis 30.94 4.00e-35 141.00
IUUC-Gga-041255 Gallus gallus 63.57 2.00e-149 521.00
IUUC-Gma-044345 Glycine max 26.74 4.00e-28 118.00
IUUC-Ggo-045118 Gorilla gorilla 81.91 0.00e+00 670.00
IUUC-Hsa-046961 Homo sapiens 81.65 0.00e+00 667.00
IUUC-Hvu-047219 Hordeum vulgare 31.91 4.00e-36 145.00
IUUC-Itr-048310 Ictidomys tridecemlineatus 83.20 0.00e+00 676.00
IUUC-Kpa-049122 Komagataella pastoris 29.26 7.00e-23 101.00
IUUC-Lch-050390 Latimeria chalumnae 57.33 1.00e-121 429.00
IUUC-Loc-052076 Lepisosteus oculatus 48.63 6.00e-95 340.00
IUUC-Lma-053270 Leptosphaeria maculans 30.36 2.00e-18 86.30
IUUC-Laf-054241 Loxodonta africana 82.38 0.00e+00 679.00
IUUC-Mcc-055445 Macaca mulatta 81.40 0.00e+00 668.00
IUUC-Meu-056701 Macropus eugenii 71.76 3.00e-106 377.00
IUUC-Mor-056911 Magnaporthe oryzae 29.23 7.00e-28 117.00
IUUC-Mpo-057525 Magnaporthe poae 30.42 1.00e-33 137.00
IUUC-Mtr-058036 Medicago truncatula 27.30 9.00e-29 120.00
IUUC-Mla-058923 Melampsora laricipopulina 27.56 2.00e-18 86.70
IUUC-Mga-059779 Meleagris gallopavo 63.82 2.00e-150 525.00
IUUC-Mvi-060394 Microbotryum violaceum 26.47 5.00e-20 92.00
IUUC-Mmr-061573 Microcebus murinus 81.65 0.00e+00 654.00
IUUC-Mdo-062961 Monodelphis domestica 62.95 2.00e-155 541.00
IUUC-Mmu-063554 Mus musculus 91.71 0.00e+00 711.00
IUUC-Mac-064862 Musa acuminata 30.43 4.00e-29 122.00
IUUC-Mpu-066725 Mustela putorius furo 82.17 0.00e+00 661.00
IUUC-Mlu-067095 Myotis lucifugus 81.70 0.00e+00 664.00
IUUC-Nfi-068488 Neosartorya fischeri 28.35 3.00e-24 105.00
IUUC-Ncr-068709 Neurospora crassa 28.82 4.00e-27 115.00
IUUC-Nle-069614 Nomascus leucogenys 81.49 0.00e+00 668.00
IUUC-Opr-070604 Ochotona princeps 80.10 0.00e+00 661.00
IUUC-Ont-071684 Oreochromis niloticus 48.71 5.00e-102 364.00
IUUC-Oan-073074 Ornithorhynchus anatinus 65.30 3.00e-149 521.00
IUUC-Ocu-074393 Oryctolagus cuniculus 82.95 0.00e+00 637.00
IUUC-Oba-075342 Oryza barthii 29.60 1.00e-30 127.00
IUUC-Obr-076370 Oryza brachyantha 28.86 6.00e-30 124.00
IUUC-Ogl-077049 Oryza glaberrima 29.09 9.00e-31 127.00
IUUC-Ogu-078466 Oryza glumaepatula 29.49 1.00e-30 127.00
IUUC-Oin-080214 Oryza indica 29.97 5.00e-26 111.00
IUUC-Olo-080978 Oryza longistaminata 29.97 5.00e-26 111.00
IUUC-Ome-081321 Oryza meridionalis 29.67 1.00e-28 121.00
IUUC-Oni-082345 Oryza nivara 29.49 1.00e-30 127.00
IUUC-Opu-083337 Oryza punctata 29.80 2.00e-30 126.00
IUUC-Oru-085094 Oryza rufipogon 29.49 1.00e-30 127.00
IUUC-Osa-085382 Oryza sativa 28.28 7.00e-14 70.90
IUUC-Ola-087540 Oryzias latipes 41.49 2.00e-83 302.00
IUUC-Oga-088329 Otolemur garnettii 80.88 0.00e+00 652.00
IUUC-Oar-089413 Ovis aries 82.43 0.00e+00 640.00
IUUC-Ptr-090534 Pan troglodytes 81.91 0.00e+00 671.00
IUUC-Pan-092581 Papio anubis 81.35 0.00e+00 665.00
IUUC-Psi-093812 Pelodiscus sinensis 65.70 9.00e-153 533.00
IUUC-Pma-094758 Petromyzon marinus 38.50 5.00e-29 120.00
IUUC-Ppa-095216 Physcomitrella patens 27.55 3.00e-26 112.00
IUUC-Pab-098114 Pongo abelii 81.91 0.00e+00 669.00
IUUC-Pop-099394 Populus trichocarpa 28.27 4.00e-28 118.00
IUUC-Pca-100968 Procavia capensis 82.43 1.00e-178 618.00
IUUC-Ppe-101385 Prunus persica 26.15 1.00e-22 100.00
IUUC-Pva-102164 Pteropus vampyrus 84.20 0.00e+00 656.00
IUUC-Pgr-103524 Puccinia graminis 25.41 3.00e-15 76.30
IUUC-Ptt-103863 Puccinia triticina 25.32 3.00e-11 62.00
IUUC-Pyt-104666 Pyrenophora triticirepentis 25.40 8.00e-11 61.20
IUUC-Sce-106334 Saccharomyces cerevisiae 32.50 1.00e-21 97.10
IUUC-Sha-107540 Sarcophilus harrisii 70.28 2.00e-164 571.00
IUUC-Sja-107890 Schizosaccharomyces japonicus 27.75 4.00e-21 95.10
IUUC-Spo-108342 Schizosaccharomyces pombe 25.40 1.00e-15 77.40
IUUC-Ssl-108488 Sclerotinia sclerotiorum 28.72 2.00e-15 78.20
IUUC-Smo-108767 Selaginella moellendorffii 29.97 2.00e-26 112.00
IUUC-Sit-110267 Setaria italica 28.86 5.00e-32 132.00
IUUC-Sly-111439 Solanum lycopersicum 28.53 5.00e-31 128.00
IUUC-Stu-112664 Solanum tuberosum 27.42 9.00e-30 124.00
IUUC-Sar-113388 Sorex araneus 78.81 0.00e+00 644.00
IUUC-Sbi-114679 Sorghum bicolor 30.56 6.00e-30 125.00
IUUC-Sre-115113 Sporisorium reilianum 27.97 1.00e-21 97.80
IUUC-Ssc-115311 Sus scrofa 81.91 0.00e+00 648.00
IUUC-Tgu-116672 Taeniopygia guttata 60.36 3.00e-134 471.00
IUUC-Tru-117689 Takifugu rubripes 45.62 1.00e-91 329.00
IUUC-Tsy-119627 Tarsius syrichta 81.91 0.00e+00 658.00
IUUC-Tni-120137 Tetraodon nigroviridis 44.96 2.00e-91 329.00
IUUC-Tca-120958 Theobroma cacao 26.92 2.00e-25 110.00
IUUC-Tre-122133 Trichoderma reesei 29.89 1.00e-23 103.00
IUUC-Tvi-122387 Trichoderma virens 30.60 2.00e-25 109.00
IUUC-Tae-125823 Triticum aestivum 31.55 1.00e-34 140.00
IUUC-Ttr-128539 Tursiops truncatus 83.98 0.00e+00 679.00
IUUC-Uma-129403 Ustilago maydis 26.35 1.00e-19 91.30
IUUC-Vda-129978 Verticillium dahliae 23.32 4.00e-14 72.00
IUUC-Vpa-130315 Vicugna pacos 82.64 0.00e+00 653.00
IUUC-Vvi-131262 Vitis vinifera 29.01 3.00e-29 122.00
IUUC-Xtr-132190 Xenopus tropicalis 54.81 4.00e-123 434.00
IUUC-Yli-134492 Yarrowia lipolytica 29.58 2.00e-22 100.00
IUUC-Zma-135832 Zea mays 29.91 7.00e-31 127.00
Created Date 25-Jun-2017

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