iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Csa-023714

Ensembl Protein ID

ENSCSAP00000007619.1

UniProt Accession

A0A0D9RG80; A0A0D9RG80_CHLSB

Genbank Protein ID

ENSCSAP00000007619

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AQIB01022285

Gene Name

RAD23B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCSAG00000011420.1	ENSCSAT00000009504.1	ENSCSAP00000007619.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.40e-19	69.5	190	227
ULD/UDP/UBQ/UBQ_PIM	2.20e-27	94.8	1	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           +e ++ ++++MG++re+++ aLra++nn+++AveyLl 
   Q: 190  YENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLM 227
           5789********************************95 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           m++t+ktl++++f++++++++tv++lKeki++e+g   +p++ qkLIyaGkiL+Ddt L+e++i+++++v+++v+k+k
   Q: 1    MQVTLKTLQQQTFKIDIDPEETVKALKEKIESEKGkdaFPVAGQKLIYAGKILNDDTALKEYKIDEKNFVVVMVTKPK 78
           99*************************************************************************997 PP

Organism

Chlorocebus sabaeus

Protein Sequence
(Fasta)

MQVTLKTLQQ QTFKIDIDPE ETVKALKEKI ESEKGKDAFP VAGQKLIYAG KILNDDTALK 60
EYKIDEKNFV VVMVTKPKAV STPAPATTQQ SAPASTTAVT SSTATTVAQA PTPVPALAPT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCCGGCCCC ATCCCCCCAG GTTTTTCGCG TGGGGGAGGG GGCACGTCTC GGCGAGTCAC 60
GATGATGGCG GCCACCATCC TGTGGTGAGC TAGCGGATTC CCTGCTTGTC TCGCCGAGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0071942--C:XPC complex
GO:0003684--F:damaged DNA binding
GO:0000715--P:nucleotide-excision repair, DNA damage recognition
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0007283--P:spermatogenesis

KEGG

csab:103219057

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001195	Ailuropoda melanoleuca	94.40	3.00e-95	341.00
IUUC-Apl-003371	Anas platyrhynchos	72.99	4.00e-122	431.00
IUUC-Aca-004599	Anolis carolinensis	81.66	6.00e-94	337.00
IUUC-Aly-006159	Arabidopsis lyrata	33.57	2.00e-54	206.00
IUUC-Ath-006676	Arabidopsis thaliana	39.84	1.00e-40	160.00
IUUC-Ago-007830	Ashbya gossypii	26.01	1.00e-19	90.50
IUUC-Acl-008212	Aspergillus clavatus	47.01	4.00e-19	89.00
IUUC-Afl-008605	Aspergillus flavus	44.12	1.00e-19	90.90
IUUC-Afu-008877	Aspergillus fumigatus	46.27	1.00e-18	87.40
IUUC-Aor-010032	Aspergillus oryzae	44.12	2.00e-19	89.70
IUUC-Ate-010458	Aspergillus terreus	40.73	6.00e-30	124.00
IUUC-Ame-011107	Astyanax mexicanus	67.96	1.00e-33	137.00
IUUC-Bta-012922	Bos taurus	92.67	2.00e-131	462.00
IUUC-Bci-013933	Botrytis cinerea	36.09	9.00e-22	97.40
IUUC-Bol-016493	Brassica oleracea	36.29	1.00e-35	143.00
IUUC-Bra-016970	Brassica rapa	34.95	3.00e-53	202.00
IUUC-Cja-018772	Callithrix jacchus	97.07	3.00e-142	498.00
IUUC-Cfa-020683	Canis familiaris	82.89	4.00e-137	481.00
IUUC-Cpo-022145	Cavia porcellus	92.42	7.00e-140	490.00
IUUC-Cre-022810	Chlamydomonas reinhardtii	36.87	8.00e-30	124.00
IUUC-Cho-024814	Choloepus hoffmanni	73.33	3.00e-84	305.00
IUUC-Cin-025741	Ciona intestinalis	41.28	5.00e-36	144.00
IUUC-Csv-025823	Ciona savignyi	40.26	1.00e-42	166.00
IUUC-Cne-027056	Cryptococcus neoformans	47.44	1.00e-15	77.40
IUUC-Cme-027260	Cyanidioschyzon merolae	28.93	3.00e-27	116.00
IUUC-Dre-028369	Danio rerio	72.40	6.00e-83	300.00
IUUC-Dno-029543	Dasypus novemcinctus	90.95	2.00e-137	482.00
IUUC-Dse-031336	Dothistroma septosporum	47.41	1.00e-17	84.00
IUUC-Dme-032027	Drosophila melanogaster	37.19	1.00e-64	240.00
IUUC-Ete-032583	Echinops telfairi	85.09	9.00e-99	353.00
IUUC-Eca-034243	Equus caballus	98.72	6.00e-94	337.00
IUUC-Eeu-034721	Erinaceus europaeus	88.99	1.00e-73	269.00
IUUC-Fca-035679	Felis catus	93.64	5.00e-135	474.00
IUUC-Fal-037148	Ficedula albicollis	72.21	6.00e-119	420.00
IUUC-Fox-037960	Fusarium oxysporum	44.19	1.00e-15	77.40
IUUC-Ggr-040116	Gaeumannomyces graminis	46.27	4.00e-16	79.00
IUUC-Gga-040544	Gallus gallus	72.19	1.00e-125	442.00
IUUC-Gac-042239	Gasterosteus aculeatus	56.40	2.00e-100	358.00
IUUC-Gma-044245	Glycine max	33.89	1.00e-56	213.00
IUUC-Ggo-045125	Gorilla gorilla	100.00	2.00e-105	375.00
IUUC-Hsa-046519	Homo sapiens	100.00	2.00e-105	375.00
IUUC-Hvu-047832	Hordeum vulgare	37.05	2.00e-32	133.00
IUUC-Itr-048295	Ictidomys tridecemlineatus	92.42	7.00e-130	456.00
IUUC-Kpa-049314	Komagataella pastoris	37.66	3.00e-30	125.00
IUUC-Lch-050553	Latimeria chalumnae	67.75	2.00e-101	362.00
IUUC-Lpe-050801	Leersia perrieri	36.78	1.00e-34	140.00
IUUC-Loc-051748	Lepisosteus oculatus	68.52	3.00e-75	275.00
IUUC-Lma-053328	Leptosphaeria maculans	48.68	1.00e-13	67.40
IUUC-Laf-054293	Loxodonta africana	95.09	1.00e-124	439.00
IUUC-Mcc-055600	Macaca mulatta	100.00	1.00e-113	402.00
IUUC-Meu-056082	Macropus eugenii	66.55	3.00e-70	258.00
IUUC-Mor-057287	Magnaporthe oryzae	50.00	2.00e-16	79.70
IUUC-Mpo-057609	Magnaporthe poae	46.51	2.00e-15	76.30
IUUC-Mtr-058148	Medicago truncatula	38.22	2.00e-40	159.00
IUUC-Mla-058961	Melampsora laricipopulina	46.62	3.00e-26	112.00
IUUC-Mga-060060	Meleagris gallopavo	44.98	6.00e-30	124.00
IUUC-Mvi-060220	Microbotryum violaceum	43.61	2.00e-21	97.40
IUUC-Mmr-061159	Microcebus murinus	97.52	1.00e-98	353.00
IUUC-Mdo-061967	Monodelphis domestica	79.85	7.00e-124	437.00
IUUC-Mmu-063258	Mus musculus	88.01	9.00e-149	519.00
IUUC-Mac-064468	Musa acuminata	33.18	3.00e-53	202.00
IUUC-Mpu-066389	Mustela putorius furo	94.80	9.00e-96	343.00
IUUC-Mlu-067999	Myotis lucifugus	90.49	2.00e-119	421.00
IUUC-Nfi-068390	Neosartorya fischeri	46.27	9.00e-19	87.80
IUUC-Ncr-068685	Neurospora crassa	44.78	3.00e-24	105.00
IUUC-Nle-069655	Nomascus leucogenys	98.78	1.00e-153	535.00
IUUC-Opr-070234	Ochotona princeps	84.57	7.00e-30	124.00
IUUC-Ont-072484	Oreochromis niloticus	56.32	1.00e-100	359.00
IUUC-Ocu-074831	Oryctolagus cuniculus	83.90	9.00e-134	469.00
IUUC-Ogl-077067	Oryza glaberrima	33.56	1.00e-52	200.00
IUUC-Oin-079203	Oryza indica	33.64	1.00e-52	199.00
IUUC-Opu-083963	Oryza punctata	38.33	1.00e-36	146.00
IUUC-Osa-085951	Oryza sativa	33.64	1.00e-52	199.00
IUUC-Ola-086540	Oryzias latipes	61.94	4.00e-64	238.00
IUUC-Olu-087843	Ostreococcus lucimarinus	42.79	7.00e-39	154.00
IUUC-Oga-088023	Otolemur garnettii	89.10	1.00e-137	483.00
IUUC-Oar-089964	Ovis aries	92.76	8.00e-118	416.00
IUUC-Ptr-091165	Pan troglodytes	98.71	3.00e-133	468.00
IUUC-Pan-092009	Papio anubis	98.79	2.00e-153	535.00
IUUC-Psi-093477	Pelodiscus sinensis	85.98	2.00e-90	325.00
IUUC-Ppa-095964	Physcomitrella patens	43.61	8.00e-28	117.00
IUUC-Pfo-097385	Poecilia formosa	58.84	2.00e-101	362.00
IUUC-Pab-097868	Pongo abelii	100.00	2.00e-104	372.00
IUUC-Pop-099642	Populus trichocarpa	35.45	1.00e-55	210.00
IUUC-Pca-100652	Procavia capensis	97.00	1.00e-70	259.00
IUUC-Pva-102137	Pteropus vampyrus	98.77	5.00e-99	354.00
IUUC-Ptt-103717	Puccinia triticina	45.93	1.00e-25	110.00
IUUC-Pte-104303	Pyrenophora teres	50.00	7.00e-20	91.70
IUUC-Pyt-104580	Pyrenophora triticirepentis	50.00	9.00e-20	90.90
IUUC-Rno-104844	Rattus norvegicus	88.70	2.00e-150	525.00
IUUC-Sce-106214	Saccharomyces cerevisiae	35.77	5.00e-13	68.90
IUUC-Sha-107073	Sarcophilus harrisii	84.10	4.00e-109	387.00
IUUC-Spo-108298	Schizosaccharomyces pombe	42.04	5.00e-38	151.00
IUUC-Ssl-108382	Sclerotinia sclerotiorum	43.75	6.00e-17	81.60
IUUC-Sar-112925	Sorex araneus	88.76	3.00e-90	325.00
IUUC-Sre-114894	Sporisorium reilianum	51.61	3.00e-11	62.80
IUUC-Ssc-116329	Sus scrofa	95.35	2.00e-137	482.00
IUUC-Tgu-116918	Taeniopygia guttata	75.67	5.00e-133	467.00
IUUC-Tru-118651	Takifugu rubripes	60.77	1.00e-73	270.00
IUUC-Tsy-118836	Tarsius syrichta	99.26	4.00e-49	188.00
IUUC-Tvi-122617	Trichoderma virens	52.56	2.00e-18	86.70
IUUC-Tme-127092	Tuber melanosporum	36.36	1.00e-27	117.00
IUUC-Tbe-127493	Tupaia belangeri	84.07	7.00e-73	267.00
IUUC-Ttr-128464	Tursiops truncatus	97.74	4.00e-101	361.00
IUUC-Uma-129484	Ustilago maydis	47.54	1.00e-11	64.70
IUUC-Vpa-130357	Vicugna pacos	88.57	3.00e-89	321.00
IUUC-Vvi-131039	Vitis vinifera	36.47	7.00e-40	157.00
IUUC-Xtr-132679	Xenopus tropicalis	71.90	4.00e-108	384.00
IUUC-Xma-133503	Xiphophorus maculatus	56.66	4.00e-104	371.00
IUUC-Yli-134615	Yarrowia lipolytica	41.67	3.00e-36	145.00
IUUC-Zma-135929	Zea mays	30.34	3.00e-50	192.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence