iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID	PINA
Protein Expression/Proteomics
GPMDB

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	SOCS	20978077; 21074711

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MRLPCEVVFA RYKANAGVNP KPTKSQKGFV ILQKLRQTPP QYQITVAVAG DKTGNKFELN 60
KPPIILDKFI AQGKTTITFQ TTPAVMVCIS KANPEALAQL IEAIRKIVKG ENVDIEKVKV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTCAATAA AAAATGCGAT TACCATGTGA AGTGGTTTTT GCACGTTATA AAGCAAATGC 60
CGGAGTTAAT CCAAAACCCA CGAAATCGCA AAAAGGATTT GTTATTCTGC AAAAACTTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR032675--L_dom-like

Gene Ontology

GO:0031462--C:Cul2-RING ubiquitin ligase complex
GO:0005634--C:nucleus
GO:0033314--P:mitotic DNA replication checkpoint

KEGG

cel:CELE_F33G12.4

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001780	Ailuropoda melanoleuca	26.67	7.00e-14	70.50
IUUC-Atr-002772	Amborella trichopoda	33.90	5.00e-06	43.50
IUUC-Apl-004029	Anas platyrhynchos	35.00	7.00e-09	54.30
IUUC-Aca-004845	Anolis carolinensis	26.50	2.00e-06	45.80
IUUC-Aly-005571	Arabidopsis lyrata	26.14	6.00e-08	52.00
IUUC-Ath-006853	Arabidopsis thaliana	27.01	1.00e-10	59.30
IUUC-Ang-009506	Aspergillus niger	39.13	1.10e+00	26.60
IUUC-Ame-011571	Astyanax mexicanus	25.88	2.00e-13	68.90
IUUC-Bta-013510	Bos taurus	27.61	4.00e-13	68.20
IUUC-Bci-013665	Botrytis cinerea	24.26	1.60e-02	33.10
IUUC-Bol-016339	Brassica oleracea	26.26	4.00e-08	50.80
IUUC-Bra-016795	Brassica rapa	34.91	2.00e-08	52.00
IUUC-Cja-019616	Callithrix jacchus	26.82	6.00e-14	70.50
IUUC-Cfa-020085	Canis familiaris	25.93	2.00e-13	68.90
IUUC-Cpo-022006	Cavia porcellus	26.71	4.00e-11	61.20
IUUC-Cre-022825	Chlamydomonas reinhardtii	27.27	8.00e-03	33.50
IUUC-Csa-023376	Chlorocebus sabaeus	27.53	8.00e-16	76.60
IUUC-Cho-024851	Choloepus hoffmanni	27.27	2.00e-08	52.40
IUUC-Csv-025951	Ciona savignyi	25.55	2.00e-15	75.90
IUUC-Dre-027424	Danio rerio	35.00	4.00e-09	55.50
IUUC-Dno-029840	Dasypus novemcinctus	25.46	5.00e-12	64.30
IUUC-Dor-030722	Dipodomys ordii	26.11	9.00e-14	70.10
IUUC-Dme-031624	Drosophila melanogaster	22.12	4.00e-06	44.70
IUUC-Ete-032265	Echinops telfairi	27.85	2.00e-16	78.60
IUUC-Eca-033505	Equus caballus	31.82	4.00e-10	58.90
IUUC-Eeu-034807	Erinaceus europaeus	27.12	4.00e-13	67.80
IUUC-Fca-035883	Felis catus	27.04	6.00e-13	67.40
IUUC-Fal-037470	Ficedula albicollis	30.99	6.00e-04	37.40
IUUC-Gmo-039145	Gadus morhua	24.07	1.00e-12	66.20
IUUC-Gga-040580	Gallus gallus	26.57	3.00e-09	54.70
IUUC-Gac-041408	Gasterosteus aculeatus	24.77	1.00e-13	69.70
IUUC-Gma-043846	Glycine max	30.67	4.00e-05	41.20
IUUC-Ggo-044999	Gorilla gorilla	27.22	3.00e-15	75.10
IUUC-Hsa-046896	Homo sapiens	26.90	4.00e-14	71.20
IUUC-Hvu-047769	Hordeum vulgare	29.10	8.00e-06	43.50
IUUC-Itr-048389	Ictidomys tridecemlineatus	26.52	2.00e-14	72.00
IUUC-Lch-049921	Latimeria chalumnae	27.67	1.00e-08	53.10
IUUC-Loc-052946	Lepisosteus oculatus	25.71	1.00e-09	56.20
IUUC-Laf-053665	Loxodonta africana	25.38	1.00e-13	69.70
IUUC-Mcc-055451	Macaca mulatta	27.22	1.00e-15	75.90
IUUC-Meu-056407	Macropus eugenii	34.25	1.00e-07	50.40
IUUC-Mtr-057683	Medicago truncatula	27.61	1.00e-07	49.70
IUUC-Mga-059898	Meleagris gallopavo	32.50	2.00e-08	53.10
IUUC-Mvi-060250	Microbotryum violaceum	38.46	1.80e+00	27.30
IUUC-Mmr-061640	Microcebus murinus	28.44	2.00e-17	82.00
IUUC-Mdo-062013	Monodelphis domestica	26.56	1.00e-07	49.70
IUUC-Mmu-064208	Mus musculus	28.31	3.00e-12	65.10
IUUC-Mac-064501	Musa acuminata	31.51	1.00e-04	39.30
IUUC-Mpu-066695	Mustela putorius furo	25.76	4.00e-12	64.30
IUUC-Mlu-067598	Myotis lucifugus	27.63	8.00e-14	70.10
IUUC-Nle-069282	Nomascus leucogenys	26.75	5.00e-12	64.30
IUUC-Opr-070622	Ochotona princeps	24.15	2.00e-11	62.00
IUUC-Ont-072349	Oreochromis niloticus	25.16	6.00e-11	60.80
IUUC-Oan-073270	Ornithorhynchus anatinus	24.90	2.00e-04	38.90
IUUC-Ocu-074328	Oryctolagus cuniculus	25.47	1.00e-13	69.70
IUUC-Obr-076454	Oryza brachyantha	25.13	3.00e-09	54.70
IUUC-Ogl-077480	Oryza glaberrima	24.14	5.00e-09	54.30
IUUC-Oin-079319	Oryza indica	29.41	3.00e-08	52.00
IUUC-Olo-080347	Oryza longistaminata	36.84	3.00e-07	49.30
IUUC-Ome-081910	Oryza meridionalis	27.39	5.00e-08	51.60
IUUC-Ola-087391	Oryzias latipes	25.16	4.00e-13	67.80
IUUC-Oga-088088	Otolemur garnettii	25.79	8.00e-13	67.00
IUUC-Oar-089741	Ovis aries	27.61	7.00e-13	67.00
IUUC-Ptr-091019	Pan troglodytes	26.90	1.00e-14	73.20
IUUC-Pan-092495	Papio anubis	27.22	1.00e-15	76.30
IUUC-Psi-093778	Pelodiscus sinensis	25.22	1.00e-07	50.40
IUUC-Pma-094443	Petromyzon marinus	25.27	7.00e-08	50.40
IUUC-Ppa-095427	Physcomitrella patens	21.33	3.00e-06	44.70
IUUC-Pfo-096494	Poecilia formosa	25.70	3.00e-13	68.60
IUUC-Pab-097847	Pongo abelii	27.53	4.00e-15	74.70
IUUC-Pop-099197	Populus trichocarpa	29.20	3.00e-07	48.10
IUUC-Pca-100526	Procavia capensis	27.82	2.00e-08	52.80
IUUC-Ppe-101851	Prunus persica	31.71	7.00e-05	40.00
IUUC-Pva-103223	Pteropus vampyrus	26.01	2.00e-12	65.50
IUUC-Pgr-103622	Puccinia graminis	28.12	2.00e-06	47.80
IUUC-Pyt-104751	Pyrenophora triticirepentis	26.79	5.30e-02	32.30
IUUC-Rno-105407	Rattus norvegicus	26.77	1.00e-09	56.20
IUUC-Sha-107485	Sarcophilus harrisii	31.82	5.00e-09	55.10
IUUC-Spo-108106	Schizosaccharomyces pombe	27.07	2.60e-02	33.10
IUUC-Sit-110214	Setaria italica	39.71	2.00e-07	48.90
IUUC-Sly-111052	Solanum lycopersicum	32.00	9.00e-08	50.10
IUUC-Stu-112067	Solanum tuberosum	23.16	1.00e-07	49.30
IUUC-Sar-113321	Sorex araneus	30.53	2.00e-09	55.80
IUUC-Sbi-114187	Sorghum bicolor	37.33	4.00e-07	47.80
IUUC-Ssc-116105	Sus scrofa	30.91	3.00e-09	55.80
IUUC-Tgu-116857	Taeniopygia guttata	30.11	5.00e-08	51.20
IUUC-Tru-118303	Takifugu rubripes	25.32	4.00e-08	51.20
IUUC-Tsy-119382	Tarsius syrichta	33.33	2.00e-05	42.70
IUUC-Tni-120292	Tetraodon nigroviridis	25.47	4.00e-14	71.20
IUUC-Tca-121678	Theobroma cacao	27.66	1.00e-07	49.70
IUUC-Tae-124968	Triticum aestivum	29.10	3.00e-06	44.70
IUUC-Tbe-128087	Tupaia belangeri	27.40	2.00e-14	72.00
IUUC-Ttr-128489	Tursiops truncatus	25.24	1.00e-14	72.80
IUUC-Vda-129866	Verticillium dahliae	29.03	1.20e-01	31.20
IUUC-Vpa-130740	Vicugna pacos	30.00	5.00e-08	51.60
IUUC-Vvi-131120	Vitis vinifera	30.00	1.00e-05	42.70
IUUC-Xtr-132352	Xenopus tropicalis	24.52	3.00e-10	58.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence